RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 A0A0A6YYD5 115 aa6.42□□□□□ -1.38
UBR4-212ENST00000475973 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.42□□□□□ -1.38
UBR4-212ENST00000475973 A0A1W2PQL4 384 aaPredicted RBP6.42□□□□□ -1.38
UBR4-212ENST00000475973 SHISA3A0PJX4 238 aa6.42□□□□□ -1.38
UBR4-212ENST00000475973 LNP1A1A4G5 178 aa6.42□□□□□ -1.38
UBR4-212ENST00000475973 C7orf66A4D0T2 115 aa6.42□□□□□ -1.38
UBR4-212ENST00000475973 FAM227AF5H4B4 570 aa6.42□□□□□ -1.38
UBR4-212ENST00000475973 HYAL3O43820 417 aaPredicted RBP6.42□□□□□ -1.38
UBR4-212ENST00000475973 GUCY1B2O75343 617 aa6.42□□□□□ -1.38
UBR4-212ENST00000475973 LEFTY1O75610 366 aa6.42□□□□□ -1.38
UBR4-212ENST00000475973 SC5DO75845 299 aa6.42□□□□□ -1.38
UBR4-212ENST00000475973 CDRT1O95170 752 aa6.42□□□□□ -1.38
UBR4-212ENST00000475973 C1QBP02746 253 aa6.42□□□□□ -1.38
UBR4-212ENST00000475973 CFIP05156 583 aa6.42□□□□□ -1.38
UBR4-212ENST00000475973 IFI6P09912 130 aa6.42□□□□□ -1.38
UBR4-212ENST00000475973 OR12D1P0DN82 309 aa6.42□□□□□ -1.38
UBR4-212ENST00000475973 DRD2P14416 443 aa6.42□□□□□ -1.38
UBR4-212ENST00000475973 GABRG2P18507 467 aa6.42□□□□□ -1.38
UBR4-212ENST00000475973 MYL9P24844 172 aa6.42□□□□□ -1.38
UBR4-212ENST00000475973 TEAD1P28347 426 aa6.42□□□□□ -1.38
UBR4-212ENST00000475973 SOX3P41225 446 aa6.42□□□□□ -1.38
UBR4-212ENST00000475973 WASP42768 502 aa6.42□□□□□ -1.38
UBR4-212ENST00000475973 NOVA1P51513 510 aaKnown RBP6.42□□□□□ -1.38
UBR4-212ENST00000475973 RACK1P63244 317 aaKnown RBP6.42□□□□□ -1.38
UBR4-212ENST00000475973 MESP2Q0VG99 397 aa6.42□□□□□ -1.38
UBR4-212ENST00000475973 FAPQ12884 760 aa6.42□□□□□ -1.38
UBR4-212ENST00000475973 TSPAN31Q12999 210 aa6.42□□□□□ -1.38
UBR4-212ENST00000475973 TP53BP2Q13625 1128 aa6.42□□□□□ -1.38
UBR4-212ENST00000475973 DDX39BQ13838 428 aaKnown RBP6.42□□□□□ -1.38
UBR4-212ENST00000475973 EFR3AQ14156 821 aa6.42□□□□□ -1.38
UBR4-212ENST00000475973 GANABQ14697 944 aaKnown RBP6.42□□□□□ -1.38
UBR4-212ENST00000475973 ZNF284Q2VY69 593 aa6.42□□□□□ -1.38
UBR4-212ENST00000475973 TBRG1Q3YBR2 411 aa6.42□□□□□ -1.38
UBR4-212ENST00000475973 ZFP69Q49AA0 526 aa6.42□□□□□ -1.38
UBR4-212ENST00000475973 PODNL1Q6PEZ8 512 aa6.42□□□□□ -1.38
UBR4-212ENST00000475973 PAQR6Q6TCH4 344 aa6.42□□□□□ -1.38
UBR4-212ENST00000475973 TMEM107Q6UX40 140 aa6.42□□□□□ -1.38
UBR4-212ENST00000475973 SEZ6L2Q6UXD5 910 aa6.42□□□□□ -1.38
UBR4-212ENST00000475973 KIAA1324Q6UXG2 1013 aaKnown RBP6.42□□□□□ -1.38
UBR4-212ENST00000475973 TMIGD1Q6UXZ0 262 aa6.42□□□□□ -1.38
UBR4-212ENST00000475973 RBM45Q8IUH3 476 aaKnown RBP6.42□□□□□ -1.38
UBR4-212ENST00000475973 TMEFF1Q8IYR6 380 aa6.42□□□□□ -1.38
UBR4-212ENST00000475973 MMP21Q8N119 569 aa6.42□□□□□ -1.38
UBR4-212ENST00000475973 HDDC3Q8N4P3 179 aa6.42□□□□□ -1.38
UBR4-212ENST00000475973 TCEANCQ8N8B7 351 aa6.42□□□□□ -1.38
UBR4-212ENST00000475973 ANKRD53Q8N9V6 530 aa6.42□□□□□ -1.38
UBR4-212ENST00000475973 ZNF740Q8NDX6 193 aa6.42□□□□□ -1.38
UBR4-212ENST00000475973 TMIEQ8NEW7 156 aa6.42□□□□□ -1.38
UBR4-212ENST00000475973 GPR156Q8NFN8 814 aa6.42□□□□□ -1.38
UBR4-212ENST00000475973 TOR1AIP2Q8NFQ8 470 aa6.42□□□□□ -1.38
UBR4-212ENST00000475973 OR7G1Q8NGA0 311 aa6.42□□□□□ -1.38
UBR4-212ENST00000475973 GRPEL2Q8TAA5 225 aa6.42□□□□□ -1.38
UBR4-212ENST00000475973 BBS10Q8TAM1 723 aa6.42□□□□□ -1.38
UBR4-212ENST00000475973 CEP76Q8TAP6 659 aa6.42□□□□□ -1.38
UBR4-212ENST00000475973 CXorf40AQ8TE69 158 aa6.42□□□□□ -1.38
UBR4-212ENST00000475973 WFIKKN2Q8TEU8 576 aa6.42□□□□□ -1.38
UBR4-212ENST00000475973 C17orf50Q8WW18 174 aa6.42□□□□□ -1.38
UBR4-212ENST00000475973 CAPSLQ8WWF8 208 aa6.42□□□□□ -1.38
UBR4-212ENST00000475973 RLN3Q8WXF3 142 aa6.42□□□□□ -1.38
UBR4-212ENST00000475973 DIO2Q92813 273 aa6.42□□□□□ -1.38
UBR4-212ENST00000475973 ERLEC1Q96DZ1 483 aa6.42□□□□□ -1.38
UBR4-212ENST00000475973 ZBED6CLQ96FA7 236 aaPredicted RBP6.42□□□□□ -1.38
UBR4-212ENST00000475973 ABHD17AQ96GS6 310 aa6.42□□□□□ -1.38
UBR4-212ENST00000475973 KCTD7Q96MP8 289 aa6.42□□□□□ -1.38
UBR4-212ENST00000475973 GABRG3Q99928 467 aa6.42□□□□□ -1.38
UBR4-212ENST00000475973 ATF6BQ99941 703 aa6.42□□□□□ -1.38
UBR4-212ENST00000475973 KCNS3Q9BQ31 491 aa6.42□□□□□ -1.38
UBR4-212ENST00000475973 TREX2Q9BQ50 279 aaPredicted RBP6.42□□□□□ -1.38
UBR4-212ENST00000475973 TMEM43Q9BTV4 400 aa6.42□□□□□ -1.38
UBR4-212ENST00000475973 PINK1Q9BXM7 581 aa6.42□□□□□ -1.38
UBR4-212ENST00000475973 ZDHHC4Q9NPG8 344 aa6.42□□□□□ -1.38
UBR4-212ENST00000475973 AHSPQ9NZD4 102 aa6.42□□□□□ -1.38
UBR4-212ENST00000475973 SUSD2Q9UGT4 822 aa6.42□□□□□ -1.38
UBR4-212ENST00000475973 CD84Q9UIB8 345 aa6.42□□□□□ -1.38
UBR4-212ENST00000475973 ATXN7L1Q9ULK2 861 aaPredicted RBP6.42□□□□□ -1.38
UBR4-212ENST00000475973 TMCC3Q9ULS5 477 aa6.42□□□□□ -1.38
UBR4-212ENST00000475973 ENTPD4Q9Y227 616 aa6.42□□□□□ -1.38
UBR4-212ENST00000475973 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.42□□□□□ -1.38
UBR4-212ENST00000475973 RBMX2Q9Y388 322 aaKnown RBP6.42□□□□□ -1.38
UBR4-212ENST00000475973 CDH10Q9Y6N8 788 aa6.42□□□□□ -1.38
UBR4-212ENST00000475973 DMXL1Q9Y485 3027 aa6.42□□□□□ -1.38
UBR4-212ENST00000475973 OTOGLQ3ZCN5 2332 aa6.42□□□□□ -1.38
UBR4-212ENST00000475973 RIF1Q5UIP0 2472 aaKnown RBP6.41□□□□□ -1.38
UBR4-212ENST00000475973 F5P12259 2224 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 A0A0G2JMP0 313 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 A0A0G2JPF8 293 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 FABP12A6NFH5 140 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 OR2AG2A6NM03 316 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 C4orf47A7E2U8 309 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 HNRNPCL2B2RXH8 293 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 HNRNPCL3B7ZW38 293 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 WWP2O00308 870 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 PRICKLE3O43900 615 aaPredicted RBP6.41□□□□□ -1.38
UBR4-212ENST00000475973 TMPRSS11DO60235 418 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 CLEC3AO75596 197 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 LALBAP00709 142 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 EPHX1P07099 455 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 CLEC2LP0C7M8 214 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 HSMCR30P0CW71 290 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 HNRNPCL4P0DMR1 293 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms