RNA–Protein interactions for RNA: ENST00000474851.1

LSAMP-203, Transcript of limbic system associated membrane protein, humanhuman

TSL 5

Gene LSAMP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-203ENST00000474851 MMP16P51512 607 aa6.56□□□□□ -1.36
LSAMP-203ENST00000474851 NCBP2P52298 156 aaKnown RBP eCLIP6.56□□□□□ -1.36
LSAMP-203ENST00000474851 GAS1P54826 345 aa6.56□□□□□ -1.36
LSAMP-203ENST00000474851 PMPCAQ10713 525 aa6.56□□□□□ -1.36
LSAMP-203ENST00000474851 SNTA1Q13424 505 aa6.56□□□□□ -1.36
LSAMP-203ENST00000474851 GAB1Q13480 694 aa6.56□□□□□ -1.36
LSAMP-203ENST00000474851 PDE7AQ13946 482 aa6.56□□□□□ -1.36
LSAMP-203ENST00000474851 PDCD4Q53EL6 469 aaKnown RBP6.56□□□□□ -1.36
LSAMP-203ENST00000474851 CCDC92Q53HC0 331 aaPredicted RBP6.56□□□□□ -1.36
LSAMP-203ENST00000474851 ZNF385BQ569K4 471 aa6.56□□□□□ -1.36
LSAMP-203ENST00000474851 XKR7Q5GH72 579 aa6.56□□□□□ -1.36
LSAMP-203ENST00000474851 C6orf163Q5TEZ5 329 aa6.56□□□□□ -1.36
LSAMP-203ENST00000474851 TMEM198Q66K66 360 aa6.56□□□□□ -1.36
LSAMP-203ENST00000474851 ANKRD26P1Q6NSI1 321 aa6.56□□□□□ -1.36
LSAMP-203ENST00000474851 SEM1Q6ZVN7 128 aa6.56□□□□□ -1.36
LSAMP-203ENST00000474851 IKBIPQ70UQ0 350 aa6.56□□□□□ -1.36
LSAMP-203ENST00000474851 SPATA24Q86W54 205 aa6.56□□□□□ -1.36
LSAMP-203ENST00000474851 CROCCP3Q8IVE0 287 aa6.56□□□□□ -1.36
LSAMP-203ENST00000474851 OR2L13Q8N349 312 aa6.56□□□□□ -1.36
LSAMP-203ENST00000474851 LILRB4Q8NHJ6 448 aa6.56□□□□□ -1.36
LSAMP-203ENST00000474851 NEIL3Q8TAT5 605 aa6.56□□□□□ -1.36
LSAMP-203ENST00000474851 FNDC8Q8TC99 324 aa6.56□□□□□ -1.36
LSAMP-203ENST00000474851 NUDT8Q8WV74 236 aa6.56□□□□□ -1.36
LSAMP-203ENST00000474851 TWIST2Q8WVJ9 160 aa6.56□□□□□ -1.36
LSAMP-203ENST00000474851 SLC35A4Q96G79 324 aa6.56□□□□□ -1.36
LSAMP-203ENST00000474851 TMEM41AQ96HV5 264 aa6.56□□□□□ -1.36
LSAMP-203ENST00000474851 JSRP1Q96MG2 331 aaPredicted RBP6.56□□□□□ -1.36
LSAMP-203ENST00000474851 LRRC37BQ96QE4 947 aa6.56□□□□□ -1.36
LSAMP-203ENST00000474851 BBS4Q96RK4 519 aa6.56□□□□□ -1.36
LSAMP-203ENST00000474851 TIMP4Q99727 224 aa6.56□□□□□ -1.36
LSAMP-203ENST00000474851 CCT7Q99832 543 aa6.56□□□□□ -1.36
LSAMP-203ENST00000474851 ECSITQ9BQ95 431 aa6.56□□□□□ -1.36
LSAMP-203ENST00000474851 TTYH2Q9BSA4 534 aa6.56□□□□□ -1.36
LSAMP-203ENST00000474851 BTBD10Q9BSF8 475 aa6.56□□□□□ -1.36
LSAMP-203ENST00000474851 C20orf27Q9GZN8 174 aa6.56□□□□□ -1.36
LSAMP-203ENST00000474851 TP63Q9H3D4 680 aaPredicted RBP6.56□□□□□ -1.36
LSAMP-203ENST00000474851 GALNT9Q9HCQ5 603 aa6.56□□□□□ -1.36
LSAMP-203ENST00000474851 SSU72Q9NP77 194 aaKnown RBP6.56□□□□□ -1.36
LSAMP-203ENST00000474851 PFDN4Q9NQP4 134 aa6.56□□□□□ -1.36
LSAMP-203ENST00000474851 GIMAP4Q9NUV9 329 aa6.56□□□□□ -1.36
LSAMP-203ENST00000474851 SENP1Q9P0U3 644 aa6.56□□□□□ -1.36
LSAMP-203ENST00000474851 NTMQ9P121 344 aa6.56□□□□□ -1.36
LSAMP-203ENST00000474851 GIMAP2Q9UG22 337 aa6.56□□□□□ -1.36
LSAMP-203ENST00000474851 HAO1Q9UJM8 370 aa6.56□□□□□ -1.36
LSAMP-203ENST00000474851 ACAD8Q9UKU7 415 aa6.56□□□□□ -1.36
LSAMP-203ENST00000474851 BOKQ9UMX3 212 aaPredicted RBP6.56□□□□□ -1.36
LSAMP-203ENST00000474851 FIS1Q9Y3D6 152 aa6.56□□□□□ -1.36
LSAMP-203ENST00000474851 CELSR2Q9HCU4 2923 aa6.56□□□□□ -1.36
LSAMP-203ENST00000474851 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.55□□□□□ -1.36
LSAMP-203ENST00000474851 TMEM247A6NEH6 219 aa6.55□□□□□ -1.36
LSAMP-203ENST00000474851 C17orf51A8MQB3 221 aa6.55□□□□□ -1.36
LSAMP-203ENST00000474851 KDM4EB2RXH2 506 aaPredicted RBP6.55□□□□□ -1.36
LSAMP-203ENST00000474851 AKAP10O43572 662 aa6.55□□□□□ -1.36
LSAMP-203ENST00000474851 PFDN1O60925 122 aa6.55□□□□□ -1.36
LSAMP-203ENST00000474851 ERN1O75460 977 aaKnown RBP6.55□□□□□ -1.36
LSAMP-203ENST00000474851 REM1O75628 298 aa6.55□□□□□ -1.36
LSAMP-203ENST00000474851 SERPINB7O75635 380 aa6.55□□□□□ -1.36
LSAMP-203ENST00000474851 KRT36O76013 467 aa6.55□□□□□ -1.36
LSAMP-203ENST00000474851 SLITRK5O94991 958 aa6.55□□□□□ -1.36
LSAMP-203ENST00000474851 IFI6P09912 130 aa6.55□□□□□ -1.36
LSAMP-203ENST00000474851 TROVE2P10155 538 aaKnown RBP eCLIP6.55□□□□□ -1.36
LSAMP-203ENST00000474851 PTPN6P29350 595 aa6.55□□□□□ -1.36
LSAMP-203ENST00000474851 ADH7P40394 386 aa6.55□□□□□ -1.36
LSAMP-203ENST00000474851 MC3RP41968 323 aa6.55□□□□□ -1.36
LSAMP-203ENST00000474851 TRPC1P48995 793 aa6.55□□□□□ -1.36
LSAMP-203ENST00000474851 WDR4P57081 412 aaKnown RBP6.55□□□□□ -1.36
LSAMP-203ENST00000474851 NUP107P57740 925 aa6.55□□□□□ -1.36
LSAMP-203ENST00000474851 RPP38P78345 283 aaKnown RBP6.55□□□□□ -1.36
LSAMP-203ENST00000474851 TFF3Q07654 80 aa6.55□□□□□ -1.36
LSAMP-203ENST00000474851 PLCXD2Q0VAA5 305 aa6.55□□□□□ -1.36
LSAMP-203ENST00000474851 DCTN2Q13561 401 aaKnown RBP6.55□□□□□ -1.36
LSAMP-203ENST00000474851 CYLC2Q14093 348 aaPredicted RBP6.55□□□□□ -1.36
LSAMP-203ENST00000474851 RCN1Q15293 331 aa6.55□□□□□ -1.36
LSAMP-203ENST00000474851 CYP27C1Q4G0S4 372 aa6.55□□□□□ -1.36
LSAMP-203ENST00000474851 EIPR1Q53HC9 387 aa6.55□□□□□ -1.36
LSAMP-203ENST00000474851 NHSL2Q5HYW2 709 aa6.55□□□□□ -1.36
LSAMP-203ENST00000474851 EXOSC6Q5RKV6 272 aaKnown RBP6.55□□□□□ -1.36
LSAMP-203ENST00000474851 C6orf136Q5SQH8 315 aa6.55□□□□□ -1.36
LSAMP-203ENST00000474851 VASNQ6EMK4 673 aa6.55□□□□□ -1.36
LSAMP-203ENST00000474851 TMEM211Q6ICI0 200 aa6.55□□□□□ -1.36
LSAMP-203ENST00000474851 SLC30A6Q6NXT4 461 aa6.55□□□□□ -1.36
LSAMP-203ENST00000474851 ZNF585AQ6P3V2 769 aa6.55□□□□□ -1.36
LSAMP-203ENST00000474851 AAGABQ6PD74 315 aa6.55□□□□□ -1.36
LSAMP-203ENST00000474851 TMEM107Q6UX40 140 aa6.55□□□□□ -1.36
LSAMP-203ENST00000474851 B3GNT6Q6ZMB0 384 aa6.55□□□□□ -1.36
LSAMP-203ENST00000474851 ZNF551Q7Z340 670 aaPredicted RBP6.55□□□□□ -1.36
LSAMP-203ENST00000474851 WDR53Q7Z5U6 358 aaPredicted RBP6.55□□□□□ -1.36
LSAMP-203ENST00000474851 CCDC71Q8IV32 467 aaPredicted RBP6.55□□□□□ -1.36
LSAMP-203ENST00000474851 NUDCD3Q8IVD9 361 aa6.55□□□□□ -1.36
LSAMP-203ENST00000474851 SLC44A2Q8IWA5 706 aaPredicted RBP6.55□□□□□ -1.36
LSAMP-203ENST00000474851 FAM9CQ8IZT9 166 aa6.55□□□□□ -1.36
LSAMP-203ENST00000474851 ZNF295-AS1Q8N0V1 137 aa6.55□□□□□ -1.36
LSAMP-203ENST00000474851 EID3Q8N140 333 aa6.55□□□□□ -1.36
LSAMP-203ENST00000474851 CLHC1Q8NHS4 586 aa6.55□□□□□ -1.36
LSAMP-203ENST00000474851 CDC26Q8NHZ8 85 aa6.55□□□□□ -1.36
LSAMP-203ENST00000474851 DYDC1Q8WWB3 177 aa6.55□□□□□ -1.36
LSAMP-203ENST00000474851 RND1Q92730 232 aa6.55□□□□□ -1.36
LSAMP-203ENST00000474851 HOXB13Q92826 284 aaPredicted RBP6.55□□□□□ -1.36
LSAMP-203ENST00000474851 CIDECQ96AQ7 238 aaPredicted RBP6.55□□□□□ -1.36
LSAMP-203ENST00000474851 SARAFQ96BY9 339 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms