RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 IFT52Q9Y366 437 aa6.13□□□□□ -1.43
ATG4A-207ENST00000474825 WDR45Q9Y484 360 aa6.13□□□□□ -1.43
ATG4A-207ENST00000474825 DTNAQ9Y4J8 743 aa6.13□□□□□ -1.43
ATG4A-207ENST00000474825 B3GALT1Q9Y5Z6 326 aa6.13□□□□□ -1.43
ATG4A-207ENST00000474825 ENPP4Q9Y6X5 453 aa6.13□□□□□ -1.43
ATG4A-207ENST00000474825 ZNF292O60281 2723 aa6.13□□□□□ -1.43
ATG4A-207ENST00000474825 FER1L5A0AVI2 2057 aa6.13□□□□□ -1.43
ATG4A-207ENST00000474825 DMXL1Q9Y485 3027 aa6.12□□□□□ -1.43
ATG4A-207ENST00000474825 GXYLT2A0PJZ3 443 aa6.12□□□□□ -1.43
ATG4A-207ENST00000474825 C7orf72A4D263 438 aa6.12□□□□□ -1.43
ATG4A-207ENST00000474825 FAM149AA5PLN7 773 aa6.12□□□□□ -1.43
ATG4A-207ENST00000474825 ARRDC5A6NEK1 342 aa6.12□□□□□ -1.43
ATG4A-207ENST00000474825 FRG2CA6NGY1 282 aa6.12□□□□□ -1.43
ATG4A-207ENST00000474825 SAGE2PA6NJ88 616 aa6.12□□□□□ -1.43
ATG4A-207ENST00000474825 C9orf172C9J069 976 aa6.12□□□□□ -1.43
ATG4A-207ENST00000474825 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.12□□□□□ -1.43
ATG4A-207ENST00000474825 SOCS2O14508 198 aa6.12□□□□□ -1.43
ATG4A-207ENST00000474825 FFAR1O14842 300 aa6.12□□□□□ -1.43
ATG4A-207ENST00000474825 PLD2O14939 933 aa6.12□□□□□ -1.43
ATG4A-207ENST00000474825 CSO75390 466 aaKnown RBP6.12□□□□□ -1.43
ATG4A-207ENST00000474825 NME6O75414 186 aaPredicted RBP6.12□□□□□ -1.43
ATG4A-207ENST00000474825 UGT2B17O75795 530 aa6.12□□□□□ -1.43
ATG4A-207ENST00000474825 HPRP00739 348 aa6.12□□□□□ -1.43
ATG4A-207ENST00000474825 IGKV1D-16P01601 117 aa6.12□□□□□ -1.43
ATG4A-207ENST00000474825 OPN1SWP03999 348 aa6.12□□□□□ -1.43
ATG4A-207ENST00000474825 IFNA16P05015 189 aa6.12□□□□□ -1.43
ATG4A-207ENST00000474825 ALPLP05186 524 aa6.12□□□□□ -1.43
ATG4A-207ENST00000474825 ALPPP05187 535 aa6.12□□□□□ -1.43
ATG4A-207ENST00000474825 DBIP07108 87 aaKnown RBP6.12□□□□□ -1.43
ATG4A-207ENST00000474825 KLK3P07288 261 aaPredicted RBP6.12□□□□□ -1.43
ATG4A-207ENST00000474825 NGFRP08138 427 aa6.12□□□□□ -1.43
ATG4A-207ENST00000474825 ACADSP16219 412 aa6.12□□□□□ -1.43
ATG4A-207ENST00000474825 ITIH1P19827 911 aa6.12□□□□□ -1.43
ATG4A-207ENST00000474825 FPR1P21462 350 aa6.12□□□□□ -1.43
ATG4A-207ENST00000474825 DNAJA1P31689 397 aaKnown RBP6.12□□□□□ -1.43
ATG4A-207ENST00000474825 GABRA3P34903 492 aa6.12□□□□□ -1.43
ATG4A-207ENST00000474825 ADH7P40394 386 aa6.12□□□□□ -1.43
ATG4A-207ENST00000474825 PPP2R2BQ00005 443 aa6.12□□□□□ -1.43
ATG4A-207ENST00000474825 PLAURQ03405 335 aa6.12□□□□□ -1.43
ATG4A-207ENST00000474825 NCF4Q15080 339 aa6.12□□□□□ -1.43
ATG4A-207ENST00000474825 EBPQ15125 230 aaKnown RBP6.12□□□□□ -1.43
ATG4A-207ENST00000474825 ZNHIT3Q15649 155 aaPredicted RBP6.12□□□□□ -1.43
ATG4A-207ENST00000474825 MAPK14Q16539 360 aa6.12□□□□□ -1.43
ATG4A-207ENST00000474825 MINDY4Q4G0A6 757 aa6.12□□□□□ -1.43
ATG4A-207ENST00000474825 GPAT3Q53EU6 434 aa6.12□□□□□ -1.43
ATG4A-207ENST00000474825 C4orf48Q5BLP8 95 aa6.12□□□□□ -1.43
ATG4A-207ENST00000474825 NHSL2Q5HYW2 709 aa6.12□□□□□ -1.43
ATG4A-207ENST00000474825 RNF220Q5VTB9 566 aa6.12□□□□□ -1.43
ATG4A-207ENST00000474825 NUP210LQ5VU65 1888 aa6.12□□□□□ -1.43
ATG4A-207ENST00000474825 TBPL2Q6SJ96 375 aa6.12□□□□□ -1.43
ATG4A-207ENST00000474825 LYPD8Q6UX82 237 aa6.12□□□□□ -1.43
ATG4A-207ENST00000474825 IZUMO2Q6UXV1 221 aa6.12□□□□□ -1.43
ATG4A-207ENST00000474825 ZBTB49Q6ZSB9 765 aa6.12□□□□□ -1.43
ATG4A-207ENST00000474825 C16orf62Q7Z3J2 963 aa6.12□□□□□ -1.43
ATG4A-207ENST00000474825 SZRD1Q7Z422 152 aa6.12□□□□□ -1.43
ATG4A-207ENST00000474825 WDR53Q7Z5U6 358 aaPredicted RBP6.12□□□□□ -1.43
ATG4A-207ENST00000474825 COMTD1Q86VU5 262 aa6.12□□□□□ -1.43
ATG4A-207ENST00000474825 TMPRSS12Q86WS5 348 aa6.12□□□□□ -1.43
ATG4A-207ENST00000474825 HIPK1Q86Z02 1210 aa6.12□□□□□ -1.43
ATG4A-207ENST00000474825 ARMC10Q8N2F6 343 aa6.12□□□□□ -1.43
ATG4A-207ENST00000474825 Q8N3U1 123 aa6.12□□□□□ -1.43
ATG4A-207ENST00000474825 ZNF321PQ8N8H1 164 aa6.12□□□□□ -1.43
ATG4A-207ENST00000474825 COX18Q8N8Q8 333 aa6.12□□□□□ -1.43
ATG4A-207ENST00000474825 SMYD1Q8NB12 490 aa6.12□□□□□ -1.43
ATG4A-207ENST00000474825 APCDD1LQ8NCL9 501 aa6.12□□□□□ -1.43
ATG4A-207ENST00000474825 PIK3C3Q8NEB9 887 aa6.12□□□□□ -1.43
ATG4A-207ENST00000474825 B3GNT7Q8NFL0 401 aa6.12□□□□□ -1.43
ATG4A-207ENST00000474825 OR10Q1Q8NGQ4 319 aa6.12□□□□□ -1.43
ATG4A-207ENST00000474825 OR2Y1Q8NGV0 311 aa6.12□□□□□ -1.43
ATG4A-207ENST00000474825 OR52P1PQ8NH57 321 aa6.12□□□□□ -1.43
ATG4A-207ENST00000474825 WDR36Q8NI36 951 aaKnown RBP6.12□□□□□ -1.43
ATG4A-207ENST00000474825 RNF138Q8WVD3 245 aa6.12□□□□□ -1.43
ATG4A-207ENST00000474825 DNAJC9Q8WXX5 260 aa6.12□□□□□ -1.43
ATG4A-207ENST00000474825 PIK3R3Q92569 461 aa6.12□□□□□ -1.43
ATG4A-207ENST00000474825 NR4A3Q92570 626 aa6.12□□□□□ -1.43
ATG4A-207ENST00000474825 TMBIM1Q969X1 311 aa6.12□□□□□ -1.43
ATG4A-207ENST00000474825 TP53INP1Q96A56 240 aa6.12□□□□□ -1.43
ATG4A-207ENST00000474825 EME1Q96AY2 570 aa6.12□□□□□ -1.43
ATG4A-207ENST00000474825 OTUB1Q96FW1 271 aaPredicted RBP6.12□□□□□ -1.43
ATG4A-207ENST00000474825 RDH12Q96NR8 316 aa6.12□□□□□ -1.43
ATG4A-207ENST00000474825 CIB1Q99828 191 aa6.12□□□□□ -1.43
ATG4A-207ENST00000474825 WFDC6Q9BQY6 131 aa6.12□□□□□ -1.43
ATG4A-207ENST00000474825 NUDT9Q9BW91 350 aa6.12□□□□□ -1.43
ATG4A-207ENST00000474825 YIPF2Q9BWQ6 316 aa6.12□□□□□ -1.43
ATG4A-207ENST00000474825 POLR2J2Q9GZM3 115 aaKnown RBP6.12□□□□□ -1.43
ATG4A-207ENST00000474825 POLR2J3Q9H1A7 115 aaKnown RBP6.12□□□□□ -1.43
ATG4A-207ENST00000474825 SEMA6AQ9H2E6 1030 aa6.12□□□□□ -1.43
ATG4A-207ENST00000474825 Q9N2J8 555 aa6.12□□□□□ -1.43
ATG4A-207ENST00000474825 ACER3Q9NUN7 267 aa6.12□□□□□ -1.43
ATG4A-207ENST00000474825 FBXO34Q9NWN3 711 aa6.12□□□□□ -1.43
ATG4A-207ENST00000474825 VNN3Q9NY84 501 aa6.12□□□□□ -1.43
ATG4A-207ENST00000474825 SEC14L3Q9UDX4 400 aa6.12□□□□□ -1.43
ATG4A-207ENST00000474825 C3orf18Q9UK00 162 aa6.12□□□□□ -1.43
ATG4A-207ENST00000474825 ZNF223Q9UK11 482 aaPredicted RBP6.12□□□□□ -1.43
ATG4A-207ENST00000474825 OAZ3Q9UMX2 235 aa6.12□□□□□ -1.43
ATG4A-207ENST00000474825 ZNF443Q9Y2A4 671 aaPredicted RBP6.12□□□□□ -1.43
ATG4A-207ENST00000474825 CLCA3PQ9Y6N3 262 aa6.12□□□□□ -1.43
ATG4A-207ENST00000474825 V9GYQ6 96 aa6.12□□□□□ -1.43
ATG4A-207ENST00000474825 PCNX2A6NKB5 2137 aa6.11□□□□□ -1.43
ATG4A-207ENST00000474825 A0A1W2PRQ8 180 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms