RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 RTP2Q5QGT7 225 aa17.45■□□□□ 0.38
ECHDC1-214ENST00000474289 SLC30A6Q6NXT4 461 aa17.45■□□□□ 0.38
ECHDC1-214ENST00000474289 OLIG3Q7RTU3 272 aa17.45■□□□□ 0.38
ECHDC1-214ENST00000474289 C6orf120Q7Z4R8 191 aa17.45■□□□□ 0.38
ECHDC1-214ENST00000474289 DNAJB7Q7Z6W7 309 aaPredicted RBP17.45■□□□□ 0.38
ECHDC1-214ENST00000474289 LILRA3Q8N6C8 439 aaPredicted RBP17.45■□□□□ 0.38
ECHDC1-214ENST00000474289 ECHDC3Q96DC8 303 aa17.45■□□□□ 0.38
ECHDC1-214ENST00000474289 CNIH4Q9P003 139 aa17.45■□□□□ 0.38
ECHDC1-214ENST00000474289 ZMAT5Q9UDW3 170 aaKnown RBP17.45■□□□□ 0.38
ECHDC1-214ENST00000474289 COPS3Q9UNS2 423 aa17.45■□□□□ 0.38
ECHDC1-214ENST00000474289 CHST2Q9Y4C5 530 aa17.45■□□□□ 0.38
ECHDC1-214ENST00000474289 A0A0G2JK05 382 aa17.45■□□□□ 0.38
ECHDC1-214ENST00000474289 FGF2P09038 288 aa17.45■□□□□ 0.38
ECHDC1-214ENST00000474289 RAB3AP20336 220 aa17.45■□□□□ 0.38
ECHDC1-214ENST00000474289 PREPP48147 710 aa17.45■□□□□ 0.38
ECHDC1-214ENST00000474289 MLLT1Q03111 559 aaPredicted RBP17.45■□□□□ 0.38
ECHDC1-214ENST00000474289 SNTB2Q13425 540 aaKnown RBP17.45■□□□□ 0.38
ECHDC1-214ENST00000474289 TSTA3Q13630 321 aaPredicted RBP17.45■□□□□ 0.38
ECHDC1-214ENST00000474289 SFRP5Q5T4F7 317 aa17.45■□□□□ 0.38
ECHDC1-214ENST00000474289 MTFR2Q6P444 385 aa17.45■□□□□ 0.38
ECHDC1-214ENST00000474289 KLHDC8AQ8IYD2 350 aa17.45■□□□□ 0.38
ECHDC1-214ENST00000474289 SIRT6Q8N6T7 355 aa17.45■□□□□ 0.38
ECHDC1-214ENST00000474289 OR51Q1Q8NH59 317 aa17.45■□□□□ 0.38
ECHDC1-214ENST00000474289 TMEM169Q96HH4 297 aa17.45■□□□□ 0.38
ECHDC1-214ENST00000474289 FAIM2Q9BWQ8 316 aa17.45■□□□□ 0.38
ECHDC1-214ENST00000474289 SLC6A15Q9H2J7 730 aa17.45■□□□□ 0.38
ECHDC1-214ENST00000474289 PFDN2Q9UHV9 154 aa17.45■□□□□ 0.38
ECHDC1-214ENST00000474289 FLVCR2Q9UPI3 526 aa17.45■□□□□ 0.38
ECHDC1-214ENST00000474289 A0A087WUU8 490 aa17.44■□□□□ 0.38
ECHDC1-214ENST00000474289 L7N2F9 121 aa17.44■□□□□ 0.38
ECHDC1-214ENST00000474289 NPC1O15118 1278 aa17.44■□□□□ 0.38
ECHDC1-214ENST00000474289 ZNF821O75541 412 aaPredicted RBP17.44■□□□□ 0.38
ECHDC1-214ENST00000474289 UBL3O95164 117 aa17.44■□□□□ 0.38
ECHDC1-214ENST00000474289 EPPINO95925 133 aa17.44■□□□□ 0.38
ECHDC1-214ENST00000474289 TRIM23P36406 574 aa17.44■□□□□ 0.38
ECHDC1-214ENST00000474289 MANFP55145 182 aaKnown RBP17.44■□□□□ 0.38
ECHDC1-214ENST00000474289 DHODHQ02127 395 aa17.44■□□□□ 0.38
ECHDC1-214ENST00000474289 ZNF169Q14929 603 aaPredicted RBP17.44■□□□□ 0.38
ECHDC1-214ENST00000474289 ATRAIDQ6UW56 229 aa17.44■□□□□ 0.38
ECHDC1-214ENST00000474289 ALKAL2Q6UX46 152 aa17.44■□□□□ 0.38
ECHDC1-214ENST00000474289 C17orf107Q6ZR85 190 aa17.44■□□□□ 0.38
ECHDC1-214ENST00000474289 RRM2BQ7LG56 351 aa17.44■□□□□ 0.38
ECHDC1-214ENST00000474289 LMNTD1Q8N9Z9 388 aa17.44■□□□□ 0.38
ECHDC1-214ENST00000474289 BVESQ8NE79 360 aa17.44■□□□□ 0.38
ECHDC1-214ENST00000474289 DDX31Q9H8H2 851 aaKnown RBP17.44■□□□□ 0.38
ECHDC1-214ENST00000474289 GMEB2Q9UKD1 530 aa17.44■□□□□ 0.38
ECHDC1-214ENST00000474289 PRELID3BQ9Y3B1 194 aa17.44■□□□□ 0.38
ECHDC1-214ENST00000474289 TRABD2BA6NFA1 517 aa17.43■□□□□ 0.38
ECHDC1-214ENST00000474289 ASGR1P07306 291 aa17.43■□□□□ 0.38
ECHDC1-214ENST00000474289 TBXA2RP21731 343 aa17.43■□□□□ 0.38
ECHDC1-214ENST00000474289 ATP5A1P25705 553 aaKnown RBP17.43■□□□□ 0.38
ECHDC1-214ENST00000474289 MAPK8P45983 427 aa17.43■□□□□ 0.38
ECHDC1-214ENST00000474289 RNF144AP50876 292 aaPredicted RBP17.43■□□□□ 0.38
ECHDC1-214ENST00000474289 ERVFC1P60507 584 aa17.43■□□□□ 0.38
ECHDC1-214ENST00000474289 RPS7P62081 194 aaKnown RBP17.43■□□□□ 0.38
ECHDC1-214ENST00000474289 HSPB3Q12988 150 aa17.43■□□□□ 0.38
ECHDC1-214ENST00000474289 KLF9Q13886 244 aaPredicted RBP17.43■□□□□ 0.38
ECHDC1-214ENST00000474289 RETSATQ6NUM9 610 aa17.43■□□□□ 0.38
ECHDC1-214ENST00000474289 THAP4Q8WY91 577 aa17.43■□□□□ 0.38
ECHDC1-214ENST00000474289 CNOT9Q92600 299 aaKnown RBP17.43■□□□□ 0.38
ECHDC1-214ENST00000474289 VOPP1Q96AW1 172 aa17.43■□□□□ 0.38
ECHDC1-214ENST00000474289 PRRC1Q96M27 445 aa17.43■□□□□ 0.38
ECHDC1-214ENST00000474289 PELOQ9BRX2 385 aaKnown RBP17.43■□□□□ 0.38
ECHDC1-214ENST00000474289 ABCG4Q9H172 646 aa17.43■□□□□ 0.38
ECHDC1-214ENST00000474289 CFAP97Q9P2B7 532 aa17.43■□□□□ 0.38
ECHDC1-214ENST00000474289 FBXL2Q9UKC9 423 aa17.43■□□□□ 0.38
ECHDC1-214ENST00000474289 PDCD5O14737 125 aa17.43■□□□□ 0.38
ECHDC1-214ENST00000474289 SURF4O15260 269 aa17.43■□□□□ 0.38
ECHDC1-214ENST00000474289 NTN1O95631 604 aa17.43■□□□□ 0.38
ECHDC1-214ENST00000474289 CATP04040 527 aaKnown RBP17.43■□□□□ 0.38
ECHDC1-214ENST00000474289 PNLIPRP1P54315 467 aa17.43■□□□□ 0.38
ECHDC1-214ENST00000474289 TBPL1P62380 186 aa17.43■□□□□ 0.38
ECHDC1-214ENST00000474289 SLC22A10Q63ZE4 541 aa17.43■□□□□ 0.38
ECHDC1-214ENST00000474289 PRSS55Q6UWB4 352 aaPredicted RBP17.43■□□□□ 0.38
ECHDC1-214ENST00000474289 OR4Q3Q8NH05 313 aa17.43■□□□□ 0.38
ECHDC1-214ENST00000474289 FCRL4Q96PJ5 515 aa17.43■□□□□ 0.38
ECHDC1-214ENST00000474289 C7orf50Q9BRJ6 194 aaKnown RBP17.43■□□□□ 0.38
ECHDC1-214ENST00000474289 SPATA5L1Q9BVQ7 753 aa17.43■□□□□ 0.38
ECHDC1-214ENST00000474289 EMC3Q9P0I2 261 aa17.43■□□□□ 0.38
ECHDC1-214ENST00000474289 PIPOXQ9P0Z9 390 aa17.43■□□□□ 0.38
ECHDC1-214ENST00000474289 CPNE7Q9UBL6 633 aa17.43■□□□□ 0.38
ECHDC1-214ENST00000474289 KIF26AQ9ULI4 1882 aaPredicted RBP17.43■□□□□ 0.38
ECHDC1-214ENST00000474289 CARNS1A5YM72 827 aa17.42■□□□□ 0.38
ECHDC1-214ENST00000474289 ADAM12O43184 909 aa17.42■□□□□ 0.38
ECHDC1-214ENST00000474289 VIPR1P32241 457 aa17.42■□□□□ 0.38
ECHDC1-214ENST00000474289 SPINT3P49223 89 aa17.42■□□□□ 0.38
ECHDC1-214ENST00000474289 E2F1Q01094 437 aa17.42■□□□□ 0.38
ECHDC1-214ENST00000474289 CNTN1Q12860 1018 aa17.42■□□□□ 0.38
ECHDC1-214ENST00000474289 ESPNLQ6ZVH7 1005 aa17.42■□□□□ 0.38
ECHDC1-214ENST00000474289 SLC24A5Q71RS6 500 aa17.42■□□□□ 0.38
ECHDC1-214ENST00000474289 DGLUCYQ7Z3D6 616 aa17.42■□□□□ 0.38
ECHDC1-214ENST00000474289 CPXM2Q8N436 756 aa17.42■□□□□ 0.38
ECHDC1-214ENST00000474289 OR11G2Q8NGC1 345 aa17.42■□□□□ 0.38
ECHDC1-214ENST00000474289 HAVCR2Q8TDQ0 301 aa17.42■□□□□ 0.38
ECHDC1-214ENST00000474289 NPAS1Q99742 590 aa17.42■□□□□ 0.38
ECHDC1-214ENST00000474289 SCPEP1Q9HB40 452 aa17.42■□□□□ 0.38
ECHDC1-214ENST00000474289 TDP1Q9NUW8 608 aa17.42■□□□□ 0.38
ECHDC1-214ENST00000474289 C5AR2Q9P296 337 aa17.42■□□□□ 0.38
ECHDC1-214ENST00000474289 KLF2Q9Y5W3 355 aaPredicted RBP17.42■□□□□ 0.38
ECHDC1-214ENST00000474289 HNRNPCL2B2RXH8 293 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms