RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 BCLAF3A2AJT9 711 aaKnown RBP1.28□□□□□ -2.2
CCDC39-203ENST00000473854 MTMR11A4FU01 709 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 FAM159BA6NKW6 160 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 H7C0C1 242 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 GOLGA8RI6L899 631 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 M0QZ92 97 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 SGK1O00141 431 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 KCNK1O00180 336 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 RNF103O00237 685 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 EEF2KO00418 725 aaKnown RBP1.28□□□□□ -2.2
CCDC39-203ENST00000473854 NDUFAB1O14561 156 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 RASGRF2O14827 1237 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 TO15178 435 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 ALOX15BO15296 676 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 CHADO15335 359 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 RGS16O15492 202 aaPredicted RBP1.28□□□□□ -2.2
CCDC39-203ENST00000473854 TRAPPC3O43617 180 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 TYROBPO43914 113 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 PRPSAP2O60256 369 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 CACNG3O60359 315 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 CDH16O75309 829 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 SPAG7O75391 227 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 B3GAT3O94766 335 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 TOMM70O94826 608 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 GJB5O95377 273 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 SEC24AO95486 1093 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 MOCS2O96007 188 aaPredicted RBP1.28□□□□□ -2.2
CCDC39-203ENST00000473854 GSRP00390 522 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 AGTP01019 485 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 IGLV3-27P01718 113 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 IGHEP01854 428 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 CXCL10P02778 98 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 HLA-DQB2P05538 268 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 PROS1P07225 676 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 APRTP07741 180 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 SRPRAP08240 638 aaKnown RBP1.28□□□□□ -2.2
CCDC39-203ENST00000473854 IGHV4-31P0DP07 118 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 HAPLN1P10915 354 aaPredicted RBP1.28□□□□□ -2.2
CCDC39-203ENST00000473854 ODC1P11926 461 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 CCL5P13501 91 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 MMP9P14780 707 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 ERCC2P18074 760 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 TPSB2P20231 275 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 TAC1P20366 129 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 LHCGRP22888 699 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 PTPN3P26045 913 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 GCH1P30793 250 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 FOXN2P32314 431 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 ACSL1P33121 698 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 RPA3P35244 121 aaPredicted RBP1.28□□□□□ -2.2
CCDC39-203ENST00000473854 ETV5P41161 510 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 ELK3P41970 407 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 MAGEA12P43365 314 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 ACADSBP45954 432 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 SLC15A1P46059 708 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 OR1G1P47890 313 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 ATP5OP48047 213 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 IFNAR2P48551 515 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 SGSHP51688 502 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 TKTL1P51854 596 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 CCL23P55773 120 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 TPI1P60174 286 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 YWHAGP61981 247 aaKnown RBP eCLIP1.28□□□□□ -2.2
CCDC39-203ENST00000473854 CRADDP78560 199 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 BASP1P80723 227 aaKnown RBP1.28□□□□□ -2.2
CCDC39-203ENST00000473854 DEFB103AP81534 67 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 TSPY1Q01534 308 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 YWHAHQ04917 246 aaPredicted RBP1.28□□□□□ -2.2
CCDC39-203ENST00000473854 PPIDQ08752 370 aaKnown RBP1.28□□□□□ -2.2
CCDC39-203ENST00000473854 IFFO1Q0D2I5 559 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 PNRC1Q12796 327 aaPredicted RBP1.28□□□□□ -2.2
CCDC39-203ENST00000473854 PDIA2Q13087 525 aaKnown RBP1.28□□□□□ -2.2
CCDC39-203ENST00000473854 NME3Q13232 169 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 RUNX3Q13761 415 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 SLMAPQ14BN4 828 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 PAFAH1B3Q15102 231 aaKnown RBP1.28□□□□□ -2.2
CCDC39-203ENST00000473854 PDK2Q15119 407 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 TPSAB1Q15661 275 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 PKN2Q16513 984 aaKnown RBP1.28□□□□□ -2.2
CCDC39-203ENST00000473854 HADHQ16836 314 aaKnown RBP1.28□□□□□ -2.2
CCDC39-203ENST00000473854 DEFB115Q30KQ5 88 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 MS4A18Q3C1V0 323 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 SLC25A52Q3SY17 297 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 KBTBD12Q3ZCT8 623 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 SLC39A12Q504Y0 691 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 PDLIM3Q53GG5 364 aaPredicted RBP1.28□□□□□ -2.2
CCDC39-203ENST00000473854 TEX44Q53QW1 395 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 HSP90B2PQ58FF3 399 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 FAM133BQ5BKY9 247 aaKnown RBP1.28□□□□□ -2.2
CCDC39-203ENST00000473854 SLC25A53Q5H9E4 307 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 ATAD3CQ5T2N8 411 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 GRTP1Q5TC63 336 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 STEAP4Q687X5 459 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 KCTD11Q693B1 232 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 PM20D1Q6GTS8 502 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 SCYL2Q6P3W7 929 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 FUT10Q6P4F1 479 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 SLC25A47Q6Q0C1 308 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 KDELC1Q6UW63 502 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 PRSS55Q6UWB4 352 aaPredicted RBP1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms