RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 GP1BBP13224 206 aa17.25■□□□□ 0.35
PTCD3-210ENST00000473829 PRIM2P49643 509 aa17.25■□□□□ 0.35
PTCD3-210ENST00000473829 CLNS1AP54105 237 aaKnown RBP17.25■□□□□ 0.35
PTCD3-210ENST00000473829 TOMM20Q15388 145 aa17.25■□□□□ 0.35
PTCD3-210ENST00000473829 CDSNQ15517 529 aa17.25■□□□□ 0.35
PTCD3-210ENST00000473829 GRAMD1BQ3KR37 738 aa17.25■□□□□ 0.35
PTCD3-210ENST00000473829 FAM174BQ3ZCQ3 159 aa17.25■□□□□ 0.35
PTCD3-210ENST00000473829 SPDYE7PQ495Y7 208 aa17.25■□□□□ 0.35
PTCD3-210ENST00000473829 WIPI1Q5MNZ9 446 aaPredicted RBP17.25■□□□□ 0.35
PTCD3-210ENST00000473829 CCNJQ5T5M9 372 aa17.25■□□□□ 0.35
PTCD3-210ENST00000473829 CDC73Q6P1J9 531 aa17.25■□□□□ 0.35
PTCD3-210ENST00000473829 MTFR2Q6P444 385 aa17.25■□□□□ 0.35
PTCD3-210ENST00000473829 ZCCHC12Q6PEW1 402 aa17.25■□□□□ 0.35
PTCD3-210ENST00000473829 APOOLQ6UXV4 268 aa17.25■□□□□ 0.35
PTCD3-210ENST00000473829 MAMDC2Q7Z304 686 aaPredicted RBP17.25■□□□□ 0.35
PTCD3-210ENST00000473829 MRGPRGQ86SM5 289 aa17.25■□□□□ 0.35
PTCD3-210ENST00000473829 YRDCQ86U90 279 aaKnown RBP17.25■□□□□ 0.35
PTCD3-210ENST00000473829 PLCZ1Q86YW0 608 aa17.25■□□□□ 0.35
PTCD3-210ENST00000473829 FAM83FQ8NEG4 500 aaPredicted RBP17.25■□□□□ 0.35
PTCD3-210ENST00000473829 OR56A1Q8NGH5 318 aa17.25■□□□□ 0.35
PTCD3-210ENST00000473829 FAM110BQ8TC76 370 aa17.25■□□□□ 0.35
PTCD3-210ENST00000473829 ACTRT2Q8TDY3 377 aa17.25■□□□□ 0.35
PTCD3-210ENST00000473829 DYDC1Q8WWB3 177 aa17.25■□□□□ 0.35
PTCD3-210ENST00000473829 CDS1Q92903 461 aa17.25■□□□□ 0.35
PTCD3-210ENST00000473829 TP63Q9H3D4 680 aaPredicted RBP17.25■□□□□ 0.35
PTCD3-210ENST00000473829 SERHL2Q9H4I8 314 aa17.25■□□□□ 0.35
PTCD3-210ENST00000473829 SLC6A5Q9Y345 797 aa17.25■□□□□ 0.35
PTCD3-210ENST00000473829 KCNE3Q9Y6H6 103 aa17.25■□□□□ 0.35
PTCD3-210ENST00000473829 CYSRT1A8MQ03 144 aa17.24■□□□□ 0.35
PTCD3-210ENST00000473829 BCKDKO14874 412 aa17.24■□□□□ 0.35
PTCD3-210ENST00000473829 DIAPH2O60879 1101 aa17.24■□□□□ 0.35
PTCD3-210ENST00000473829 DGKQP52824 942 aa17.24■□□□□ 0.35
PTCD3-210ENST00000473829 RPS26P62854 115 aaKnown RBP17.24■□□□□ 0.35
PTCD3-210ENST00000473829 CRYZQ08257 329 aaKnown RBP17.24■□□□□ 0.35
PTCD3-210ENST00000473829 DCST1Q5T197 706 aa17.24■□□□□ 0.35
PTCD3-210ENST00000473829 EPGNQ6UW88 154 aa17.24■□□□□ 0.35
PTCD3-210ENST00000473829 COX18Q8N8Q8 333 aa17.24■□□□□ 0.35
PTCD3-210ENST00000473829 OR4A15Q8NGL6 344 aa17.24■□□□□ 0.35
PTCD3-210ENST00000473829 PHF10Q8WUB8 498 aaKnown RBP17.24■□□□□ 0.35
PTCD3-210ENST00000473829 SARAFQ96BY9 339 aa17.24■□□□□ 0.35
PTCD3-210ENST00000473829 ACTRT3Q9BYD9 372 aa17.24■□□□□ 0.35
PTCD3-210ENST00000473829 PIGUQ9H490 435 aa17.24■□□□□ 0.35
PTCD3-210ENST00000473829 FAM120CQ9NX05 1096 aaKnown RBP17.24■□□□□ 0.35
PTCD3-210ENST00000473829 MRTO4Q9UKD2 239 aaKnown RBP17.24■□□□□ 0.35
PTCD3-210ENST00000473829 ACAD8Q9UKU7 415 aa17.24■□□□□ 0.35
PTCD3-210ENST00000473829 ABCG2Q9UNQ0 655 aa17.24■□□□□ 0.35
PTCD3-210ENST00000473829 FAM215AQ9Y5M1 114 aa17.24■□□□□ 0.35
PTCD3-210ENST00000473829 PCNX3Q9H6A9 2034 aa17.24■□□□□ 0.35
PTCD3-210ENST00000473829 C15orf38-AP3S2A0A0A6YYH1 394 aa17.23■□□□□ 0.35
PTCD3-210ENST00000473829 RNF103-CHMP3A0A140T963 221 aa17.23■□□□□ 0.35
PTCD3-210ENST00000473829 C1QCP02747 245 aa17.23■□□□□ 0.35
PTCD3-210ENST00000473829 COL8A1P27658 744 aa17.23■□□□□ 0.35
PTCD3-210ENST00000473829 ZFP36L2P47974 494 aaKnown RBP17.23■□□□□ 0.35
PTCD3-210ENST00000473829 PSMD4P55036 377 aaKnown RBP17.23■□□□□ 0.35
PTCD3-210ENST00000473829 STX5Q13190 355 aa17.23■□□□□ 0.35
PTCD3-210ENST00000473829 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.23■□□□□ 0.35
PTCD3-210ENST00000473829 DPY19L1Q2PZI1 675 aa17.23■□□□□ 0.35
PTCD3-210ENST00000473829 RTL6Q6ICC9 239 aa17.23■□□□□ 0.35
PTCD3-210ENST00000473829 ZNF585AQ6P3V2 769 aa17.23■□□□□ 0.35
PTCD3-210ENST00000473829 RPTNQ6XPR3 784 aa17.23■□□□□ 0.35
PTCD3-210ENST00000473829 MARCH3Q86UD3 253 aa17.23■□□□□ 0.35
PTCD3-210ENST00000473829 ZNF808Q8N4W9 903 aaPredicted RBP17.23■□□□□ 0.35
PTCD3-210ENST00000473829 OR5D16Q8NGK9 328 aa17.23■□□□□ 0.35
PTCD3-210ENST00000473829 OR4C3Q8NH37 302 aa17.23■□□□□ 0.35
PTCD3-210ENST00000473829 CKAP2Q8WWK9 683 aa17.23■□□□□ 0.35
PTCD3-210ENST00000473829 MOAP1Q96BY2 351 aa17.23■□□□□ 0.35
PTCD3-210ENST00000473829 CHMP6Q96FZ7 201 aa17.23■□□□□ 0.35
PTCD3-210ENST00000473829 STACQ99469 402 aa17.23■□□□□ 0.35
PTCD3-210ENST00000473829 OR2B2Q9GZK3 357 aa17.23■□□□□ 0.35
PTCD3-210ENST00000473829 DUSP22Q9NRW4 184 aa17.23■□□□□ 0.35
PTCD3-210ENST00000473829 PRSS51A0A1B0GVH4 220 aa17.22■□□□□ 0.35
PTCD3-210ENST00000473829 CBR3O75828 277 aa17.22■□□□□ 0.35
PTCD3-210ENST00000473829 CPSF4O95639 269 aaKnown RBP17.22■□□□□ 0.35
PTCD3-210ENST00000473829 IDO1P14902 403 aa17.22■□□□□ 0.35
PTCD3-210ENST00000473829 ACVR2AP27037 513 aa17.22■□□□□ 0.35
PTCD3-210ENST00000473829 S100A3P33764 101 aa17.22■□□□□ 0.35
PTCD3-210ENST00000473829 POU6F2P78424 691 aaPredicted RBP17.22■□□□□ 0.35
PTCD3-210ENST00000473829 PDCD4Q53EL6 469 aaKnown RBP17.22■□□□□ 0.35
PTCD3-210ENST00000473829 WLSQ5T9L3 541 aa17.22■□□□□ 0.35
PTCD3-210ENST00000473829 ANXA8L1Q5VT79 327 aa17.22■□□□□ 0.35
PTCD3-210ENST00000473829 FADS6Q8N9I5 356 aa17.22■□□□□ 0.35
PTCD3-210ENST00000473829 OR2M3Q8NG83 312 aa17.22■□□□□ 0.35
PTCD3-210ENST00000473829 OR7D2Q96RA2 312 aa17.22■□□□□ 0.35
PTCD3-210ENST00000473829 TIMP4Q99727 224 aa17.22■□□□□ 0.35
PTCD3-210ENST00000473829 EBF4Q9BQW3 602 aa17.22■□□□□ 0.35
PTCD3-210ENST00000473829 BTBD2Q9BX70 525 aa17.22■□□□□ 0.35
PTCD3-210ENST00000473829 UGT2B28Q9BY64 529 aa17.22■□□□□ 0.35
PTCD3-210ENST00000473829 GIN1Q9NXP7 522 aa17.22■□□□□ 0.35
PTCD3-210ENST00000473829 PPP4R1LQ9P1A2 415 aa17.22■□□□□ 0.35
PTCD3-210ENST00000473829 ARHGAP21Q5T5U3 1957 aa17.21■□□□□ 0.35
PTCD3-210ENST00000473829 KIAA1549Q9HCM3 1950 aa17.21■□□□□ 0.35
PTCD3-210ENST00000473829 OXSR1O95747 527 aaPredicted RBP17.21■□□□□ 0.35
PTCD3-210ENST00000473829 BMP7P18075 431 aa17.21■□□□□ 0.35
PTCD3-210ENST00000473829 TCEA1P23193 301 aaKnown RBP17.21■□□□□ 0.35
PTCD3-210ENST00000473829 IDH3AP50213 366 aa17.21■□□□□ 0.35
PTCD3-210ENST00000473829 CASP9P55211 416 aa17.21■□□□□ 0.35
PTCD3-210ENST00000473829 NUP107P57740 925 aa17.21■□□□□ 0.35
PTCD3-210ENST00000473829 NHSL2Q5HYW2 709 aa17.21■□□□□ 0.35
PTCD3-210ENST00000473829 VASNQ6EMK4 673 aa17.21■□□□□ 0.35
PTCD3-210ENST00000473829 C6orf120Q7Z4R8 191 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms