RNA–Protein interactions for RNA: ENST00000473598.6

LMNA-213, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-213ENST00000473598 OR4N5Q8IXE1 308 aa13.81□□□□□ -0.2
LMNA-213ENST00000473598 LRRC25Q8N386 305 aaPredicted RBP13.81□□□□□ -0.2
LMNA-213ENST00000473598 FAM86B1Q8N7N1 296 aa13.81□□□□□ -0.2
LMNA-213ENST00000473598 IL17RDQ8NFM7 739 aa13.81□□□□□ -0.2
LMNA-213ENST00000473598 OR52N2Q8NGI0 321 aa13.81□□□□□ -0.2
LMNA-213ENST00000473598 OR51Q1Q8NH59 317 aa13.81□□□□□ -0.2
LMNA-213ENST00000473598 PIK3R3Q92569 461 aa13.81□□□□□ -0.2
LMNA-213ENST00000473598 REXO5Q96IC2 774 aaKnown RBP13.81□□□□□ -0.2
LMNA-213ENST00000473598 CDC6Q99741 560 aa13.81□□□□□ -0.2
LMNA-213ENST00000473598 UGT2B28Q9BY64 529 aa13.81□□□□□ -0.2
LMNA-213ENST00000473598 CHST8Q9H2A9 424 aa13.81□□□□□ -0.2
LMNA-213ENST00000473598 NARFLQ9H6Q4 476 aa13.81□□□□□ -0.2
LMNA-213ENST00000473598 NTN4Q9HB63 628 aa13.81□□□□□ -0.2
LMNA-213ENST00000473598 WARS2Q9UGM6 360 aaKnown RBP13.81□□□□□ -0.2
LMNA-213ENST00000473598 NDOR1Q9UHB4 597 aa13.81□□□□□ -0.2
LMNA-213ENST00000473598 MRPS33Q9Y291 106 aaKnown RBP13.81□□□□□ -0.2
LMNA-213ENST00000473598 NOSIPQ9Y314 301 aaKnown RBP13.81□□□□□ -0.2
LMNA-213ENST00000473598 C12orf71A8MTZ7 269 aa13.81□□□□□ -0.2
LMNA-213ENST00000473598 AGRPO00253 132 aa13.81□□□□□ -0.2
LMNA-213ENST00000473598 EI24O14681 340 aa13.81□□□□□ -0.2
LMNA-213ENST00000473598 GPR75O95800 540 aa13.81□□□□□ -0.2
LMNA-213ENST00000473598 TRAPPC2P0DI81 140 aa13.81□□□□□ -0.2
LMNA-213ENST00000473598 TRAPPC2BP0DI82 140 aa13.81□□□□□ -0.2
LMNA-213ENST00000473598 CPMP14384 443 aa13.81□□□□□ -0.2
LMNA-213ENST00000473598 SDHBP21912 280 aa13.81□□□□□ -0.2
LMNA-213ENST00000473598 CCT3P49368 545 aaKnown RBP13.81□□□□□ -0.2
LMNA-213ENST00000473598 PDX1P52945 283 aa13.81□□□□□ -0.2
LMNA-213ENST00000473598 CLDN6P56747 220 aa13.81□□□□□ -0.2
LMNA-213ENST00000473598 ESCO2Q56NI9 601 aa13.81□□□□□ -0.2
LMNA-213ENST00000473598 SAXO2Q658L1 398 aa13.81□□□□□ -0.2
LMNA-213ENST00000473598 ENPP6Q6UWR7 440 aa13.81□□□□□ -0.2
LMNA-213ENST00000473598 ANGPTL8Q6UXH0 198 aa13.81□□□□□ -0.2
LMNA-213ENST00000473598 CCDC103Q8IW40 242 aa13.81□□□□□ -0.2
LMNA-213ENST00000473598 ZNF595Q8IYB9 648 aa13.81□□□□□ -0.2
LMNA-213ENST00000473598 DEPDC4Q8N2C3 294 aa13.81□□□□□ -0.2
LMNA-213ENST00000473598 CADM2Q8N3J6 435 aa13.81□□□□□ -0.2
LMNA-213ENST00000473598 LHFPL5Q8TAF8 219 aa13.81□□□□□ -0.2
LMNA-213ENST00000473598 NEURL3Q96EH8 262 aa13.81□□□□□ -0.2
LMNA-213ENST00000473598 TMEM121BQ9BXQ6 578 aaPredicted RBP13.81□□□□□ -0.2
LMNA-213ENST00000473598 SEMA3GQ9NS98 782 aa13.81□□□□□ -0.2
LMNA-213ENST00000473598 PAK1IP1Q9NWT1 392 aaPredicted RBP13.81□□□□□ -0.2
LMNA-213ENST00000473598 RARRES3Q9UL19 164 aa13.81□□□□□ -0.2
LMNA-213ENST00000473598 SRPK3Q9UPE1 567 aa13.81□□□□□ -0.2
LMNA-213ENST00000473598 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.8□□□□□ -0.2
LMNA-213ENST00000473598 A0A1B0GX78 115 aa13.8□□□□□ -0.2
LMNA-213ENST00000473598 UPK1AO00322 258 aa13.8□□□□□ -0.2
LMNA-213ENST00000473598 HYAL3O43820 417 aaPredicted RBP13.8□□□□□ -0.2
LMNA-213ENST00000473598 CREG1O75629 220 aa13.8□□□□□ -0.2
LMNA-213ENST00000473598 HOXB1P14653 301 aaPredicted RBP13.8□□□□□ -0.2
LMNA-213ENST00000473598 PPP2R1BP30154 601 aa13.8□□□□□ -0.2
LMNA-213ENST00000473598 CSTF2P33240 577 aaKnown RBP eCLIP13.8□□□□□ -0.2
LMNA-213ENST00000473598 FADDQ13158 208 aa13.8□□□□□ -0.2
LMNA-213ENST00000473598 PUM1Q14671 1186 aaKnown RBP eCLIP13.8□□□□□ -0.22e-15■□□□□ 10.7
LMNA-213ENST00000473598 NKG7Q16617 165 aa13.8□□□□□ -0.2
LMNA-213ENST00000473598 SPDYE7PQ495Y7 208 aa13.8□□□□□ -0.2
LMNA-213ENST00000473598 COX20Q5RI15 118 aa13.8□□□□□ -0.2
LMNA-213ENST00000473598 CPZQ66K79 652 aa13.8□□□□□ -0.2
LMNA-213ENST00000473598 TMEM64Q6YI46 380 aa13.8□□□□□ -0.2
LMNA-213ENST00000473598 RNF130Q86XS8 419 aa13.8□□□□□ -0.2
LMNA-213ENST00000473598 OFCC1Q8IZS5 231 aa13.8□□□□□ -0.2
LMNA-213ENST00000473598 OR9A2Q8NGT5 310 aa13.8□□□□□ -0.2
LMNA-213ENST00000473598 OR10Z1Q8NGY1 313 aa13.8□□□□□ -0.2
LMNA-213ENST00000473598 FBXO30Q8TB52 745 aa13.8□□□□□ -0.2
LMNA-213ENST00000473598 FAM162AQ96A26 154 aa13.8□□□□□ -0.2
LMNA-213ENST00000473598 ANKRD9Q96BM1 317 aaPredicted RBP13.8□□□□□ -0.2
LMNA-213ENST00000473598 GIMAP5Q96F15 307 aa13.8□□□□□ -0.2
LMNA-213ENST00000473598 SPATA9Q9BWV2 254 aa13.8□□□□□ -0.2
LMNA-213ENST00000473598 RBCK1Q9BYM8 510 aa13.8□□□□□ -0.2
LMNA-213ENST00000473598 ACOXLQ9NUZ1 547 aa13.8□□□□□ -0.2
LMNA-213ENST00000473598 DCAF13Q9NV06 445 aaKnown RBP13.8□□□□□ -0.2
LMNA-213ENST00000473598 OCIAD1Q9NX40 245 aa13.8□□□□□ -0.2
LMNA-213ENST00000473598 SEC16AO15027 2179 aa13.8□□□□□ -0.2
LMNA-213ENST00000473598 B4GALT2O60909 372 aa13.8□□□□□ -0.2
LMNA-213ENST00000473598 FTH1P19P0C7X4 201 aa13.8□□□□□ -0.2
LMNA-213ENST00000473598 PTGER1P34995 402 aa13.8□□□□□ -0.2
LMNA-213ENST00000473598 CRATP43155 626 aa13.8□□□□□ -0.2
LMNA-213ENST00000473598 OR1D4P47884 311 aa13.8□□□□□ -0.2
LMNA-213ENST00000473598 ID2Q02363 134 aa13.8□□□□□ -0.2
LMNA-213ENST00000473598 RHBDD2Q6NTF9 364 aa13.8□□□□□ -0.2
LMNA-213ENST00000473598 ERICH5Q6P6B1 374 aa13.8□□□□□ -0.2
LMNA-213ENST00000473598 LYPD8Q6UX82 237 aa13.8□□□□□ -0.2
LMNA-213ENST00000473598 C6orf120Q7Z4R8 191 aa13.8□□□□□ -0.2
LMNA-213ENST00000473598 ZZZ3Q8IYH5 903 aa13.8□□□□□ -0.2
LMNA-213ENST00000473598 AGBL5Q8NDL9 886 aa13.8□□□□□ -0.2
LMNA-213ENST00000473598 SFXN5Q8TD22 340 aa13.8□□□□□ -0.2
LMNA-213ENST00000473598 COL26A1Q96A83 441 aa13.8□□□□□ -0.2
LMNA-213ENST00000473598 TBC1D20Q96BZ9 403 aa13.8□□□□□ -0.2
LMNA-213ENST00000473598 DSN1Q9H410 356 aa13.8□□□□□ -0.2
LMNA-213ENST00000473598 ABCB10Q9NRK6 738 aa13.8□□□□□ -0.2
LMNA-213ENST00000473598 MAP4K5Q9Y4K4 846 aa13.8□□□□□ -0.2
LMNA-213ENST00000473598 CLDN4O14493 209 aa13.79□□□□□ -0.2
LMNA-213ENST00000473598 CTNSO60931 367 aa13.79□□□□□ -0.2
LMNA-213ENST00000473598 ATP1B1P05026 303 aa13.79□□□□□ -0.2
LMNA-213ENST00000473598 YES1P07947 543 aa13.79□□□□□ -0.2
LMNA-213ENST00000473598 FHP07954 510 aa13.79□□□□□ -0.2
LMNA-213ENST00000473598 SPNP16150 400 aa13.79□□□□□ -0.2
LMNA-213ENST00000473598 HTR2BP41595 481 aa13.79□□□□□ -0.2
LMNA-213ENST00000473598 CBX5P45973 191 aa13.79□□□□□ -0.2
LMNA-213ENST00000473598 XCR1P46094 333 aa13.79□□□□□ -0.2
LMNA-213ENST00000473598 YAP1P46937 504 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms