RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 DPH3P1Q9H4G8 78 aa12.57□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 KIAA1210Q9ULL0 1709 aa12.57□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 OR5K4A6NMS3 321 aa12.56□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 C1GALT1C1LP0DN25 315 aa12.56□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 PBX2P40425 430 aa12.56□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 DRICH1Q6PGQ1 229 aaPredicted RBP12.56□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 RSC1A1Q92681 617 aa12.56□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 GOLT1BQ9Y3E0 138 aa12.56□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 MAB21L2Q9Y586 359 aa12.56□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 EMC8O43402 210 aa12.56□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 ZNF44P15621 663 aa12.56□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 OR7A5Q15622 319 aa12.56□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 SLC22A6Q4U2R8 563 aa12.56□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 TMEM25Q86YD3 366 aa12.56□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 ADAMTS10Q9H324 1103 aa12.56□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 UNKLQ9H9P5 680 aaKnown RBP12.56□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 PRICKLE3O43900 615 aaPredicted RBP12.56□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 GMDSO60547 372 aa12.56□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 SOCS5O75159 536 aa12.56□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 F2P00734 622 aa12.56□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 APEHP13798 732 aaKnown RBP12.56□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 PITPNBP48739 271 aa12.56□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 ERV3-1Q14264 604 aa12.56□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 PLEKHS1Q5SXH7 462 aa12.56□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 HES5Q5TA89 166 aa12.56□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 HUS1BQ8NHY5 278 aa12.56□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 SMIM12Q96EX1 92 aa12.56□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 NANOGQ9H9S0 305 aa12.56□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 CD320Q9NPF0 282 aa12.56□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 ACTR3BQ9P1U1 418 aa12.56□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 TMEM265A0A087WTH1 108 aa12.56□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 SEC61A1P61619 476 aaKnown RBP12.56□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 ZXDBP98169 803 aa12.56□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 PTPRRQ15256 657 aa12.56□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 KLHDC8AQ8IYD2 350 aa12.56□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 OR52N2Q8NGI0 321 aa12.56□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 FOXRED1Q96CU9 486 aaPredicted RBP12.56□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 FRMPD1Q5SYB0 1578 aa12.56□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 FAM186AA6NE01 2351 aa12.56□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 GXYLT2A0PJZ3 443 aa12.56□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 A8MVM7 634 aa12.56□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 SGK494L7N484 410 aa12.56□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 ACRV1P26436 265 aa12.56□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 ABHD18Q0P651 414 aa12.56□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 GPR17Q13304 367 aa12.56□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 GRM7Q14831 915 aa12.56□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 PIGGQ5H8A4 983 aa12.56□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 FIGLAQ6QHK4 219 aa12.56□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 GSG1LQ6UXU4 331 aa12.56□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 FBXW12Q6X9E4 464 aa12.56□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 Q6ZSR6 202 aa12.56□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 WDR53Q7Z5U6 358 aaPredicted RBP12.56□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 IRF2BP1Q8IU81 584 aa12.56□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 KIAA1191Q96A73 305 aa12.56□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 NTAN1Q96AB6 310 aa12.56□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 ENKD1Q9H0I2 346 aa12.56□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 YLPM1P49750 1951 aaKnown RBP12.56□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 OR2M5A3KFT3 312 aa12.56□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 H3BSA7 217 aa12.56□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 OXSR1O95747 527 aaPredicted RBP12.56□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 PFKMP08237 780 aa12.56□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 CRHBPP24387 322 aa12.56□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 HOXC8P31273 242 aa12.56□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 PTGIRP43119 386 aa12.56□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 APCDD1Q8J025 514 aa12.56□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 TMEM59Q9BXS4 323 aa12.56□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 ANHXE9PGG2 379 aa12.55□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 TGM5O43548 720 aa12.55□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 PROS1P07225 676 aa12.55□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 ARAFP10398 606 aa12.55□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 PCSK2P16519 638 aa12.55□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 DRD5P21918 477 aa12.55□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 UBE2NLQ5JXB2 153 aa12.55□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 C4orf32Q8N8J7 132 aa12.55□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 IL17RDQ8NFM7 739 aa12.55□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 OR6C4Q8NGE1 309 aa12.55□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 OR1S1Q8NH92 325 aa12.55□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 MOAP1Q96BY2 351 aa12.55□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 LRR1Q96L50 414 aa12.55□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 SMOQ99835 787 aa12.55□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 RPL26L1Q9UNX3 145 aaKnown RBP12.55□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 PCDHGA1Q9Y5H4 931 aa12.55□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 NOTOA8MTQ0 251 aa12.55□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 H3BMQ9 156 aa12.55□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 B3GALNT1O75752 331 aa12.55□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 CNIH1O95406 144 aa12.55□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 MPIG6BO95866 241 aa12.55□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 AMY2AP04746 511 aa12.55□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 PLCXD3Q63HM9 321 aa12.55□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 OR4C11Q6IEV9 310 aa12.55□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 LIPIQ6XZB0 460 aa12.55□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 RBMXL3Q8N7X1 1067 aaKnown RBP12.55□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 SLC7A8Q9UHI5 535 aa12.55□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 ZNF207O43670 478 aaKnown RBP12.55□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 LDB3O75112 727 aa12.55□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 ZNF888P0CJ79 500 aaPredicted RBP12.55□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 LIPCP11150 499 aa12.55□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 ETFAP13804 333 aa12.55□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 DIO3P55073 304 aa12.55□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 ZNF92Q03936 586 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms