RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 FLYWCH1Q4VC44 716 aa17.67■□□□□ 0.42
PSPC1-203ENST00000471658 ACER2Q5QJU3 275 aa17.67■□□□□ 0.42
PSPC1-203ENST00000471658 C1orf146Q5VVC0 180 aa17.67■□□□□ 0.42
PSPC1-203ENST00000471658 OR4C3Q8NH37 302 aa17.67■□□□□ 0.42
PSPC1-203ENST00000471658 BBS10Q8TAM1 723 aa17.67■□□□□ 0.42
PSPC1-203ENST00000471658 SLC22A8Q8TCC7 542 aa17.67■□□□□ 0.42
PSPC1-203ENST00000471658 TAMM41Q96BW9 452 aa17.67■□□□□ 0.42
PSPC1-203ENST00000471658 GORASP2Q9H8Y8 452 aa17.67■□□□□ 0.42
PSPC1-203ENST00000471658 CALML5Q9NZT1 146 aa17.67■□□□□ 0.42
PSPC1-203ENST00000471658 DSPPQ9NZW4 1301 aa17.67■□□□□ 0.42
PSPC1-203ENST00000471658 IGF2RP11717 2491 aa17.66■□□□□ 0.42
PSPC1-203ENST00000471658 KIAA0513O60268 411 aa17.66■□□□□ 0.42
PSPC1-203ENST00000471658 PPM1BO75688 479 aa17.66■□□□□ 0.42
PSPC1-203ENST00000471658 CIB2O75838 187 aa17.66■□□□□ 0.42
PSPC1-203ENST00000471658 F10P00742 488 aa17.66■□□□□ 0.42
PSPC1-203ENST00000471658 SERPINA1P01009 418 aa17.66■□□□□ 0.42
PSPC1-203ENST00000471658 IL12BP29460 328 aa17.66■□□□□ 0.42
PSPC1-203ENST00000471658 KRT20P35900 424 aa17.66■□□□□ 0.42
PSPC1-203ENST00000471658 POLE2P56282 527 aa17.66■□□□□ 0.42
PSPC1-203ENST00000471658 AP2B1P63010 937 aa17.66■□□□□ 0.42
PSPC1-203ENST00000471658 DMTNQ08495 405 aa17.66■□□□□ 0.42
PSPC1-203ENST00000471658 FLOT2Q14254 428 aa17.66■□□□□ 0.42
PSPC1-203ENST00000471658 GNA13Q14344 377 aa17.66■□□□□ 0.42
PSPC1-203ENST00000471658 MEP1AQ16819 746 aa17.66■□□□□ 0.42
PSPC1-203ENST00000471658 INTS11Q5TA45 600 aaKnown RBP17.66■□□□□ 0.42
PSPC1-203ENST00000471658 BROXQ5VW32 411 aa17.66■□□□□ 0.42
PSPC1-203ENST00000471658 IL20RBQ6UXL0 311 aa17.66■□□□□ 0.42
PSPC1-203ENST00000471658 VRK2Q86Y07 508 aa17.66■□□□□ 0.42
PSPC1-203ENST00000471658 SLC30A8Q8IWU4 369 aa17.66■□□□□ 0.42
PSPC1-203ENST00000471658 ZNF619Q8N2I2 560 aa17.66■□□□□ 0.42
PSPC1-203ENST00000471658 SMYD1Q8NB12 490 aa17.66■□□□□ 0.42
PSPC1-203ENST00000471658 ZCCHC14Q8WYQ9 949 aaKnown RBP17.66■□□□□ 0.42
PSPC1-203ENST00000471658 G6PC3Q9BUM1 346 aa17.66■□□□□ 0.42
PSPC1-203ENST00000471658 MTHFD2LQ9H903 347 aaPredicted RBP17.66■□□□□ 0.42
PSPC1-203ENST00000471658 ANKRD10Q9NXR5 420 aa17.66■□□□□ 0.42
PSPC1-203ENST00000471658 STMN3Q9NZ72 180 aa17.66■□□□□ 0.42
PSPC1-203ENST00000471658 GPC6Q9Y625 555 aaPredicted RBP17.66■□□□□ 0.42
PSPC1-203ENST00000471658 LAMA5O15230 3695 aa17.66■□□□□ 0.42
PSPC1-203ENST00000471658 TMEM229AB2RXF0 380 aa17.65■□□□□ 0.42
PSPC1-203ENST00000471658 ICOSLGO75144 302 aa17.65■□□□□ 0.42
PSPC1-203ENST00000471658 GMNNO75496 209 aa17.65■□□□□ 0.42
PSPC1-203ENST00000471658 UTS2O95399 124 aa17.65■□□□□ 0.42
PSPC1-203ENST00000471658 SSR4P51571 173 aa17.65■□□□□ 0.42
PSPC1-203ENST00000471658 SOX8P57073 446 aa17.65■□□□□ 0.42
PSPC1-203ENST00000471658 KPNB1Q14974 876 aaKnown RBP17.65■□□□□ 0.42
PSPC1-203ENST00000471658 GRAMD1BQ3KR37 738 aa17.65■□□□□ 0.42
PSPC1-203ENST00000471658 CRB2Q5IJ48 1285 aa17.65■□□□□ 0.42
PSPC1-203ENST00000471658 PRAMEF8Q5VWM4 474 aa17.65■□□□□ 0.42
PSPC1-203ENST00000471658 PRAMEF7Q5VXH5 474 aa17.65■□□□□ 0.42
PSPC1-203ENST00000471658 LCN8Q6JVE9 175 aa17.65■□□□□ 0.42
PSPC1-203ENST00000471658 LINC00696Q6ZRV3 163 aa17.65■□□□□ 0.42
PSPC1-203ENST00000471658 BEST3Q8N1M1 668 aa17.65■□□□□ 0.42
PSPC1-203ENST00000471658 SLC15A4Q8N697 577 aa17.65■□□□□ 0.42
PSPC1-203ENST00000471658 BHLHE22Q8NFJ8 381 aaPredicted RBP17.65■□□□□ 0.42
PSPC1-203ENST00000471658 ZNF354BQ96LW1 612 aa17.65■□□□□ 0.42
PSPC1-203ENST00000471658 NSMCE2Q96MF7 247 aa17.65■□□□□ 0.42
PSPC1-203ENST00000471658 DENND2DQ9H6A0 471 aaPredicted RBP17.65■□□□□ 0.42
PSPC1-203ENST00000471658 GPR83Q9NYM4 423 aa17.65■□□□□ 0.42
PSPC1-203ENST00000471658 V9GYQ6 96 aa17.65■□□□□ 0.42
PSPC1-203ENST00000471658 CLDN24A6NM45 220 aa17.65■□□□□ 0.42
PSPC1-203ENST00000471658 NPIPB9F8W1W9 429 aa17.65■□□□□ 0.42
PSPC1-203ENST00000471658 K7ENP7 123 aa17.65■□□□□ 0.42
PSPC1-203ENST00000471658 TPST1O60507 370 aa17.65■□□□□ 0.42
PSPC1-203ENST00000471658 ABCB7O75027 752 aa17.65■□□□□ 0.42
PSPC1-203ENST00000471658 UGT2B17O75795 530 aa17.65■□□□□ 0.42
PSPC1-203ENST00000471658 MFN2O95140 757 aa17.65■□□□□ 0.42
PSPC1-203ENST00000471658 FBXO45P0C2W1 286 aa17.65■□□□□ 0.42
PSPC1-203ENST00000471658 DCTP40126 519 aa17.65■□□□□ 0.42
PSPC1-203ENST00000471658 PNLIPRP2P54317 469 aa17.65■□□□□ 0.42
PSPC1-203ENST00000471658 CCNIQ14094 377 aa17.65■□□□□ 0.42
PSPC1-203ENST00000471658 ZNF791Q3KP31 576 aaPredicted RBP17.65■□□□□ 0.42
PSPC1-203ENST00000471658 GLIPR1L2Q4G1C9 344 aa17.65■□□□□ 0.42
PSPC1-203ENST00000471658 AP1ARQ63HQ0 302 aa17.65■□□□□ 0.42
PSPC1-203ENST00000471658 INO80CQ6PI98 192 aaPredicted RBP17.65■□□□□ 0.42
PSPC1-203ENST00000471658 PATL1Q86TB9 770 aaKnown RBP17.65■□□□□ 0.42
PSPC1-203ENST00000471658 FAM86B1Q8N7N1 296 aa17.65■□□□□ 0.42
PSPC1-203ENST00000471658 FDCSPQ8NFU4 85 aa17.65■□□□□ 0.42
PSPC1-203ENST00000471658 HGDQ93099 445 aa17.65■□□□□ 0.42
PSPC1-203ENST00000471658 NODALQ96S42 347 aa17.65■□□□□ 0.42
PSPC1-203ENST00000471658 MUC13Q9H3R2 512 aa17.65■□□□□ 0.42
PSPC1-203ENST00000471658 POLE3Q9NRF9 147 aa17.65■□□□□ 0.42
PSPC1-203ENST00000471658 MRTO4Q9UKD2 239 aaKnown RBP17.65■□□□□ 0.42
PSPC1-203ENST00000471658 ZNF451Q9Y4E5 1061 aa17.65■□□□□ 0.42
PSPC1-203ENST00000471658 TCRBV5S2A0A599 114 aa17.64■□□□□ 0.41
PSPC1-203ENST00000471658 OR6C70A6NIJ9 312 aa17.64■□□□□ 0.41
PSPC1-203ENST00000471658 ETS2P15036 469 aa17.64■□□□□ 0.41
PSPC1-203ENST00000471658 ATP12AP54707 1039 aa17.64■□□□□ 0.41
PSPC1-203ENST00000471658 PSMD4P55036 377 aaKnown RBP17.64■□□□□ 0.41
PSPC1-203ENST00000471658 CYBRD1Q53TN4 286 aa17.64■□□□□ 0.41
PSPC1-203ENST00000471658 PDZK1Q5T2W1 519 aa17.64■□□□□ 0.41
PSPC1-203ENST00000471658 APOOLQ6UXV4 268 aa17.64■□□□□ 0.41
PSPC1-203ENST00000471658 KRT73Q86Y46 540 aa17.64■□□□□ 0.41
PSPC1-203ENST00000471658 TMEM156Q8N614 296 aa17.64■□□□□ 0.41
PSPC1-203ENST00000471658 OR10G3Q8NGC4 313 aa17.64■□□□□ 0.41
PSPC1-203ENST00000471658 OR52P1PQ8NH57 321 aa17.64■□□□□ 0.41
PSPC1-203ENST00000471658 ASB15Q8WXK1 588 aa17.64■□□□□ 0.41
PSPC1-203ENST00000471658 SPACA9Q96E40 222 aaPredicted RBP17.64■□□□□ 0.41
PSPC1-203ENST00000471658 ZNF607Q96SK3 696 aa17.64■□□□□ 0.41
PSPC1-203ENST00000471658 ZNF552Q9H707 407 aaPredicted RBP17.64■□□□□ 0.41
PSPC1-203ENST00000471658 DCAF13Q9NV06 445 aaKnown RBP17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms