RNA–Protein interactions for RNA: ENST00000471595.5

PCCB-210, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCCB, Length 6,090 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-210ENST00000471595 FZD3Q9NPG1 666 aa12.23□□□□□ -0.45
PCCB-210ENST00000471595 APOBEC3BQ9UH17 382 aaKnown RBP12.23□□□□□ -0.45
PCCB-210ENST00000471595 POLR1CO15160 346 aaPredicted RBP12.23□□□□□ -0.45
PCCB-210ENST00000471595 ZNF888P0CJ79 500 aaPredicted RBP12.23□□□□□ -0.45
PCCB-210ENST00000471595 NKX2-5P52952 324 aaPredicted RBP12.23□□□□□ -0.45
PCCB-210ENST00000471595 GRM7Q14831 915 aa12.23□□□□□ -0.45
PCCB-210ENST00000471595 ZER1Q7Z7L7 766 aa12.23□□□□□ -0.45
PCCB-210ENST00000471595 RASGEF1AQ8N9B8 481 aa12.23□□□□□ -0.45
PCCB-210ENST00000471595 POGLUT1Q8NBL1 392 aa12.23□□□□□ -0.45
PCCB-210ENST00000471595 SLC7A13Q8TCU3 470 aa12.23□□□□□ -0.45
PCCB-210ENST00000471595 CCDC120Q96HB5 630 aa12.23□□□□□ -0.45
PCCB-210ENST00000471595 C7orf50Q9BRJ6 194 aaKnown RBP12.23□□□□□ -0.45
PCCB-210ENST00000471595 DPCDQ9BVM2 203 aaPredicted RBP12.23□□□□□ -0.45
PCCB-210ENST00000471595 PPIL3Q9H2H8 161 aaKnown RBP12.23□□□□□ -0.45
PCCB-210ENST00000471595 C8orf33Q9H7E9 229 aaPredicted RBP12.23□□□□□ -0.45
PCCB-210ENST00000471595 KCNIP3Q9Y2W7 256 aa12.23□□□□□ -0.45
PCCB-210ENST00000471595 SLC16A6O15403 523 aa12.23□□□□□ -0.45
PCCB-210ENST00000471595 DUX1O43812 170 aa12.23□□□□□ -0.45
PCCB-210ENST00000471595 TIMP1P01033 207 aa12.23□□□□□ -0.45
PCCB-210ENST00000471595 CLUP10909 449 aa12.23□□□□□ -0.45
PCCB-210ENST00000471595 ACP2P11117 423 aa12.23□□□□□ -0.45
PCCB-210ENST00000471595 GRPRP30550 384 aa12.23□□□□□ -0.45
PCCB-210ENST00000471595 SERTAD2Q14140 314 aa12.23□□□□□ -0.45
PCCB-210ENST00000471595 SLC5A12Q1EHB4 618 aa12.23□□□□□ -0.45
PCCB-210ENST00000471595 CHRFAM7AQ494W8 412 aa12.23□□□□□ -0.45
PCCB-210ENST00000471595 SPIN3Q5JUX0 258 aa12.23□□□□□ -0.45
PCCB-210ENST00000471595 CYP4V2Q6ZWL3 525 aaPredicted RBP12.23□□□□□ -0.45
PCCB-210ENST00000471595 PARP16Q8N5Y8 322 aa12.23□□□□□ -0.45
PCCB-210ENST00000471595 TCEAL4Q96EI5 215 aa12.23□□□□□ -0.45
PCCB-210ENST00000471595 GPR78Q96P69 363 aa12.23□□□□□ -0.45
PCCB-210ENST00000471595 NAA50Q9GZZ1 169 aaKnown RBP12.23□□□□□ -0.45
PCCB-210ENST00000471595 GSKIPQ9P0R6 139 aa12.23□□□□□ -0.45
PCCB-210ENST00000471595 HMX3A6NHT5 357 aa12.23□□□□□ -0.45
PCCB-210ENST00000471595 SMAD9O15198 467 aaKnown RBP12.23□□□□□ -0.45
PCCB-210ENST00000471595 PRAF2O60831 178 aa12.23□□□□□ -0.45
PCCB-210ENST00000471595 JUNBP17275 347 aaPredicted RBP12.23□□□□□ -0.45
PCCB-210ENST00000471595 ZNF84P51523 738 aa12.23□□□□□ -0.45
PCCB-210ENST00000471595 AIMP2Q13155 320 aaKnown RBP12.23□□□□□ -0.45
PCCB-210ENST00000471595 CDNFQ49AH0 187 aa12.23□□□□□ -0.45
PCCB-210ENST00000471595 BCL2L15Q5TBC7 163 aa12.23□□□□□ -0.45
PCCB-210ENST00000471595 TMEM164Q5U3C3 297 aa12.23□□□□□ -0.45
PCCB-210ENST00000471595 NOXA1Q86UR1 476 aa12.23□□□□□ -0.45
PCCB-210ENST00000471595 CHPT1Q8WUD6 406 aa12.23□□□□□ -0.45
PCCB-210ENST00000471595 TGM7Q96PF1 710 aa12.23□□□□□ -0.45
PCCB-210ENST00000471595 APOOQ9BUR5 198 aa12.23□□□□□ -0.45
PCCB-210ENST00000471595 ARL6Q9H0F7 186 aa12.23□□□□□ -0.45
PCCB-210ENST00000471595 USP22Q9UPT9 525 aa12.23□□□□□ -0.45
PCCB-210ENST00000471595 CACNG2Q9Y698 323 aa12.23□□□□□ -0.45
PCCB-210ENST00000471595 TRIM64CA6NLI5 447 aa12.22□□□□□ -0.45
PCCB-210ENST00000471595 CAPNS1P04632 268 aa12.22□□□□□ -0.45
PCCB-210ENST00000471595 CTXN1P60606 82 aa12.22□□□□□ -0.45
PCCB-210ENST00000471595 MRPS10P82664 201 aaKnown RBP12.22□□□□□ -0.45
PCCB-210ENST00000471595 TBC1D15Q8TC07 691 aa12.22□□□□□ -0.45
PCCB-210ENST00000471595 ZNF717Q9BY31 904 aaPredicted RBP12.22□□□□□ -0.45
PCCB-210ENST00000471595 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.22□□□□□ -0.45
PCCB-210ENST00000471595 TAS2R3Q9NYW6 316 aa12.22□□□□□ -0.45
PCCB-210ENST00000471595 PPP4R1LQ9P1A2 415 aa12.22□□□□□ -0.45
PCCB-210ENST00000471595 IL20RAQ9UHF4 553 aa12.22□□□□□ -0.45
PCCB-210ENST00000471595 CSNK1G3Q9Y6M4 447 aa12.22□□□□□ -0.45
PCCB-210ENST00000471595 MEGF11A6BM72 1044 aa12.22□□□□□ -0.45
PCCB-210ENST00000471595 LRFN4Q6PJG9 635 aa12.22□□□□□ -0.45
PCCB-210ENST00000471595 ELMOD2Q8IZ81 293 aa12.22□□□□□ -0.45
PCCB-210ENST00000471595 BEST3Q8N1M1 668 aa12.22□□□□□ -0.45
PCCB-210ENST00000471595 TRIM43Q96BQ3 446 aaPredicted RBP12.22□□□□□ -0.45
PCCB-210ENST00000471595 PEX11GQ96HA9 241 aa12.22□□□□□ -0.45
PCCB-210ENST00000471595 TIMM29Q9BSF4 260 aa12.22□□□□□ -0.45
PCCB-210ENST00000471595 KATNBL1Q9H079 304 aa12.22□□□□□ -0.45
PCCB-210ENST00000471595 OR10A4Q9H209 315 aa12.22□□□□□ -0.45
PCCB-210ENST00000471595 SYT4Q9H2B2 425 aa12.22□□□□□ -0.45
PCCB-210ENST00000471595 BCORQ6W2J9 1755 aa12.22□□□□□ -0.45
PCCB-210ENST00000471595 M0R129 80 aa12.22□□□□□ -0.45
PCCB-210ENST00000471595 MAS1P04201 325 aa12.22□□□□□ -0.45
PCCB-210ENST00000471595 ARSAP15289 507 aa12.22□□□□□ -0.45
PCCB-210ENST00000471595 NTHL1P78549 312 aa12.22□□□□□ -0.45
PCCB-210ENST00000471595 HHEXQ03014 270 aa12.22□□□□□ -0.45
PCCB-210ENST00000471595 ATXN7L3Q14CW9 347 aaPredicted RBP12.22□□□□□ -0.45
PCCB-210ENST00000471595 GARNL3Q5VVW2 1013 aa12.22□□□□□ -0.45
PCCB-210ENST00000471595 HMBOX1Q6NT76 420 aa12.22□□□□□ -0.45
PCCB-210ENST00000471595 LKAAEAR1Q8TD35 194 aa12.22□□□□□ -0.45
PCCB-210ENST00000471595 MSANTD3Q96H12 275 aa12.22□□□□□ -0.45
PCCB-210ENST00000471595 F5H0A9 414 aaPredicted RBP12.22□□□□□ -0.45
PCCB-210ENST00000471595 FMO6PO60774 539 aa12.22□□□□□ -0.45
PCCB-210ENST00000471595 TOXO94900 526 aa12.22□□□□□ -0.45
PCCB-210ENST00000471595 HNRNPA2B1P22626 353 aaKnown RBP12.22□□□□□ -0.45
PCCB-210ENST00000471595 LHCGRP22888 699 aa12.22□□□□□ -0.45
PCCB-210ENST00000471595 ARNTP27540 789 aa12.22□□□□□ -0.45
PCCB-210ENST00000471595 MAN2A2P49641 1150 aa12.22□□□□□ -0.45
PCCB-210ENST00000471595 METTL11BQ5VVY1 283 aa12.22□□□□□ -0.45
PCCB-210ENST00000471595 RTP3Q9BQQ7 232 aa12.22□□□□□ -0.45
PCCB-210ENST00000471595 PSORS1C1Q9UIG5 152 aa12.22□□□□□ -0.45
PCCB-210ENST00000471595 MYO18AQ92614 2054 aaKnown RBP12.22□□□□□ -0.45
PCCB-210ENST00000471595 TAF1P21675 1872 aa12.22□□□□□ -0.45
PCCB-210ENST00000471595 HLA-FP30511 346 aa12.21□□□□□ -0.45
PCCB-210ENST00000471595 XKR7Q5GH72 579 aa12.21□□□□□ -0.45
PCCB-210ENST00000471595 FAM69AQ5T7M9 428 aa12.21□□□□□ -0.45
PCCB-210ENST00000471595 AGAP6Q5VW22 663 aa12.21□□□□□ -0.45
PCCB-210ENST00000471595 SFRP4Q6FHJ7 346 aaPredicted RBP12.21□□□□□ -0.45
PCCB-210ENST00000471595 HORMAD2Q8N7B1 307 aa12.21□□□□□ -0.45
PCCB-210ENST00000471595 OR5L2Q8NGL0 311 aa12.21□□□□□ -0.45
PCCB-210ENST00000471595 HRASLS5Q96KN8 279 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms