RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 IGKV1D-16P01601 117 aa14.74□□□□□ -0.05
COL9A3-208ENST00000469802 CHRNGP07510 517 aa14.74□□□□□ -0.05
COL9A3-208ENST00000469802 FGF4P08620 206 aa14.74□□□□□ -0.05
COL9A3-208ENST00000469802 ALDH3A1P30838 453 aa14.74□□□□□ -0.05
COL9A3-208ENST00000469802 ART1P52961 327 aa14.74□□□□□ -0.05
COL9A3-208ENST00000469802 IST1P53990 364 aa14.74□□□□□ -0.05
COL9A3-208ENST00000469802 CLDN15P56746 228 aa14.74□□□□□ -0.05
COL9A3-208ENST00000469802 RFTN2Q52LD8 501 aaPredicted RBP14.74□□□□□ -0.05
COL9A3-208ENST00000469802 GIMAP5Q96F15 307 aa14.74□□□□□ -0.05
COL9A3-208ENST00000469802 TSSK3Q96PN8 268 aa14.74□□□□□ -0.05
COL9A3-208ENST00000469802 DSN1Q9H410 356 aa14.74□□□□□ -0.05
COL9A3-208ENST00000469802 SDHAF3Q9NRP4 125 aa14.74□□□□□ -0.05
COL9A3-208ENST00000469802 ST6GALNAC2Q9UJ37 374 aa14.74□□□□□ -0.05
COL9A3-208ENST00000469802 MRTO4Q9UKD2 239 aaKnown RBP14.74□□□□□ -0.05
COL9A3-208ENST00000469802 FIS1Q9Y3D6 152 aa14.74□□□□□ -0.05
COL9A3-208ENST00000469802 MTORP42345 2549 aa14.74□□□□□ -0.05
COL9A3-208ENST00000469802 GXYLT2A0PJZ3 443 aa14.73□□□□□ -0.05
COL9A3-208ENST00000469802 NKX2-2O95096 273 aa14.73□□□□□ -0.05
COL9A3-208ENST00000469802 LINC00032P0C843 101 aa14.73□□□□□ -0.05
COL9A3-208ENST00000469802 EPXP11678 715 aa14.73□□□□□ -0.05
COL9A3-208ENST00000469802 PRPS2P11908 318 aa14.73□□□□□ -0.05
COL9A3-208ENST00000469802 TCEA1P23193 301 aaKnown RBP14.73□□□□□ -0.05
COL9A3-208ENST00000469802 PSMD4P55036 377 aaKnown RBP14.73□□□□□ -0.05
COL9A3-208ENST00000469802 PRR5P85299 388 aa14.73□□□□□ -0.05
COL9A3-208ENST00000469802 STX5Q13190 355 aa14.73□□□□□ -0.05
COL9A3-208ENST00000469802 XKR7Q5GH72 579 aa14.73□□□□□ -0.05
COL9A3-208ENST00000469802 EXOSC6Q5RKV6 272 aaKnown RBP14.73□□□□□ -0.05
COL9A3-208ENST00000469802 CDC20BQ86Y33 519 aa14.73□□□□□ -0.05
COL9A3-208ENST00000469802 GRAMD2AQ8IUY3 354 aa14.73□□□□□ -0.05
COL9A3-208ENST00000469802 HOMEZQ8IX15 550 aa14.73□□□□□ -0.05
COL9A3-208ENST00000469802 GCNT2Q8N0V5 402 aa14.73□□□□□ -0.05
COL9A3-208ENST00000469802 ZFP28Q8NHY6 868 aa14.73□□□□□ -0.05
COL9A3-208ENST00000469802 TWIST2Q8WVJ9 160 aa14.73□□□□□ -0.05
COL9A3-208ENST00000469802 INTS12Q96CB8 462 aaKnown RBP14.73□□□□□ -0.05
COL9A3-208ENST00000469802 PPCDCQ96CD2 204 aa14.73□□□□□ -0.05
COL9A3-208ENST00000469802 C1GALT1C1Q96EU7 318 aa14.73□□□□□ -0.05
COL9A3-208ENST00000469802 ZBED6CLQ96FA7 236 aaPredicted RBP14.73□□□□□ -0.05
COL9A3-208ENST00000469802 MS4A4EQ96PG1 132 aa14.73□□□□□ -0.05
COL9A3-208ENST00000469802 FAM111AQ96PZ2 611 aa14.73□□□□□ -0.05
COL9A3-208ENST00000469802 FOXC2Q99958 501 aa14.73□□□□□ -0.05
COL9A3-208ENST00000469802 MECRQ9BV79 373 aa14.73□□□□□ -0.05
COL9A3-208ENST00000469802 IQCGQ9H095 443 aaKnown RBP14.73□□□□□ -0.05
COL9A3-208ENST00000469802 PIGMQ9H3S5 423 aa14.73□□□□□ -0.05
COL9A3-208ENST00000469802 LIME1Q9H400 295 aa14.73□□□□□ -0.05
COL9A3-208ENST00000469802 C3orf14Q9HBI5 128 aa14.73□□□□□ -0.05
COL9A3-208ENST00000469802 EQTNQ9NQ60 294 aa14.73□□□□□ -0.05
COL9A3-208ENST00000469802 ACSS1Q9NUB1 689 aaPredicted RBP14.73□□□□□ -0.05
COL9A3-208ENST00000469802 GALNT8Q9NY28 637 aa14.73□□□□□ -0.05
COL9A3-208ENST00000469802 MED11Q9P086 117 aa14.73□□□□□ -0.05
COL9A3-208ENST00000469802 SLC17A7Q9P2U7 560 aa14.73□□□□□ -0.05
COL9A3-208ENST00000469802 PACSIN3Q9UKS6 424 aa14.73□□□□□ -0.05
COL9A3-208ENST00000469802 NUP214P35658 2090 aaPredicted RBP14.73□□□□□ -0.05
COL9A3-208ENST00000469802 A0A1W2PNV4 684 aa14.72□□□□□ -0.05
COL9A3-208ENST00000469802 AKAP10O43572 662 aa14.72□□□□□ -0.05
COL9A3-208ENST00000469802 GOSR1O95249 250 aa14.72□□□□□ -0.05
COL9A3-208ENST00000469802 UTS2O95399 124 aa14.72□□□□□ -0.05
COL9A3-208ENST00000469802 CHEK2O96017 543 aa14.72□□□□□ -0.05
COL9A3-208ENST00000469802 BCKDHAP12694 445 aa14.72□□□□□ -0.05
COL9A3-208ENST00000469802 PEPDP12955 493 aa14.72□□□□□ -0.05
COL9A3-208ENST00000469802 HK1P19367 917 aa14.72□□□□□ -0.05
COL9A3-208ENST00000469802 ARRB2P32121 409 aa14.72□□□□□ -0.05
COL9A3-208ENST00000469802 GABRA3P34903 492 aa14.72□□□□□ -0.05
COL9A3-208ENST00000469802 RIPPLY3P57055 190 aa14.72□□□□□ -0.05
COL9A3-208ENST00000469802 VSNL1P62760 191 aa14.72□□□□□ -0.05
COL9A3-208ENST00000469802 EEF1A1P68104 462 aaKnown RBP14.72□□□□□ -0.05
COL9A3-208ENST00000469802 TMEM44Q2T9K0 475 aa14.72□□□□□ -0.05
COL9A3-208ENST00000469802 GRAMD1BQ3KR37 738 aa14.72□□□□□ -0.05
COL9A3-208ENST00000469802 ARL13AQ5H913 290 aaPredicted RBP14.72□□□□□ -0.05
COL9A3-208ENST00000469802 EEF1A1P5Q5VTE0 462 aa14.72□□□□□ -0.05
COL9A3-208ENST00000469802 RAET1LQ5VY80 246 aa14.72□□□□□ -0.05
COL9A3-208ENST00000469802 APOOLQ6UXV4 268 aa14.72□□□□□ -0.05
COL9A3-208ENST00000469802 MARCH3Q86UD3 253 aa14.72□□□□□ -0.05
COL9A3-208ENST00000469802 CDRT4Q8N9R6 151 aa14.72□□□□□ -0.05
COL9A3-208ENST00000469802 GOT1L1Q8NHS2 421 aaPredicted RBP14.72□□□□□ -0.05
COL9A3-208ENST00000469802 CLHC1Q8NHS4 586 aa14.72□□□□□ -0.05
COL9A3-208ENST00000469802 AENQ8WTP8 325 aaKnown RBP14.72□□□□□ -0.05
COL9A3-208ENST00000469802 PIK3R3Q92569 461 aa14.72□□□□□ -0.05
COL9A3-208ENST00000469802 MTERF3Q96E29 417 aa14.72□□□□□ -0.05
COL9A3-208ENST00000469802 RMND5BQ96G75 393 aaPredicted RBP14.72□□□□□ -0.05
COL9A3-208ENST00000469802 RBM24Q9BX46 236 aaKnown RBP14.72□□□□□ -0.05
COL9A3-208ENST00000469802 BAIAP2L1Q9UHR4 511 aa14.72□□□□□ -0.05
COL9A3-208ENST00000469802 TRAF6Q9Y4K3 522 aa14.72□□□□□ -0.05
COL9A3-208ENST00000469802 TLDC2A0PJX2 215 aa14.71□□□□□ -0.05
COL9A3-208ENST00000469802 OR2M5A3KFT3 312 aa14.71□□□□□ -0.05
COL9A3-208ENST00000469802 A8MXE2 369 aa14.71□□□□□ -0.05
COL9A3-208ENST00000469802 LINC01387J3KSC0 135 aa14.71□□□□□ -0.05
COL9A3-208ENST00000469802 PIP5K1BO14986 540 aa14.71□□□□□ -0.05
COL9A3-208ENST00000469802 KCNH1O95259 989 aa14.71□□□□□ -0.05
COL9A3-208ENST00000469802 CRHP06850 196 aa14.71□□□□□ -0.05
COL9A3-208ENST00000469802 NGFRP08138 427 aa14.71□□□□□ -0.05
COL9A3-208ENST00000469802 ACP2P11117 423 aa14.71□□□□□ -0.05
COL9A3-208ENST00000469802 GPC1P35052 558 aa14.71□□□□□ -0.05
COL9A3-208ENST00000469802 ASMTP46597 345 aa14.71□□□□□ -0.05
COL9A3-208ENST00000469802 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.71□□□□□ -0.05
COL9A3-208ENST00000469802 GALNTL6Q49A17 601 aa14.71□□□□□ -0.05
COL9A3-208ENST00000469802 GLYR1Q49A26 553 aaPredicted RBP14.71□□□□□ -0.05
COL9A3-208ENST00000469802 VPS26BQ4G0F5 336 aa14.71□□□□□ -0.05
COL9A3-208ENST00000469802 MFSD12Q6NUT3 480 aa14.71□□□□□ -0.05
COL9A3-208ENST00000469802 LUZP2Q86TE4 346 aa14.71□□□□□ -0.05
COL9A3-208ENST00000469802 OR6Y1Q8NGX8 325 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms