RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 UBFD1O14562 309 aaKnown RBP11.02□□□□□ -0.65
HDAC3-204ENST00000469207 EMC8O43402 210 aa11.02□□□□□ -0.65
HDAC3-204ENST00000469207 TNFRSF21O75509 655 aa11.02□□□□□ -0.65
HDAC3-204ENST00000469207 IGKV1D-16P01601 117 aa11.02□□□□□ -0.65
HDAC3-204ENST00000469207 HSD3B1P14060 373 aa11.02□□□□□ -0.65
HDAC3-204ENST00000469207 NID1P14543 1247 aa11.02□□□□□ -0.65
HDAC3-204ENST00000469207 IMPDH1P20839 514 aa11.02□□□□□ -0.65
HDAC3-204ENST00000469207 TBXA2RP21731 343 aa11.02□□□□□ -0.65
HDAC3-204ENST00000469207 HSD3B2P26439 372 aa11.02□□□□□ -0.65
HDAC3-204ENST00000469207 ECHS1P30084 290 aa11.02□□□□□ -0.65
HDAC3-204ENST00000469207 NCBP2P52298 156 aaKnown RBP eCLIP11.02□□□□□ -0.65
HDAC3-204ENST00000469207 NR1H2P55055 460 aa11.02□□□□□ -0.65
HDAC3-204ENST00000469207 ACSM2AQ08AH3 577 aa11.02□□□□□ -0.65
HDAC3-204ENST00000469207 HEPACAMQ14CZ8 416 aa11.02□□□□□ -0.65
HDAC3-204ENST00000469207 SGCBQ16585 318 aa11.02□□□□□ -0.65
HDAC3-204ENST00000469207 SPDYAQ5MJ70 313 aa11.02□□□□□ -0.65
HDAC3-204ENST00000469207 LGSNQ5TDP6 509 aa11.02□□□□□ -0.65
HDAC3-204ENST00000469207 ACSM2BQ68CK6 577 aa11.02□□□□□ -0.65
HDAC3-204ENST00000469207 EXOC3L1Q86VI1 746 aa11.02□□□□□ -0.65
HDAC3-204ENST00000469207 NOA1Q8NC60 698 aaKnown RBP11.02□□□□□ -0.65
HDAC3-204ENST00000469207 PIK3R3Q92569 461 aa11.02□□□□□ -0.65
HDAC3-204ENST00000469207 ERP27Q96DN0 273 aa11.02□□□□□ -0.65
HDAC3-204ENST00000469207 C1GALT1C1Q96EU7 318 aa11.02□□□□□ -0.65
HDAC3-204ENST00000469207 ZNF382Q96SR6 550 aa11.02□□□□□ -0.65
HDAC3-204ENST00000469207 KLHDC3Q9BQ90 382 aa11.02□□□□□ -0.65
HDAC3-204ENST00000469207 SLC39A3Q9BRY0 314 aa11.02□□□□□ -0.65
HDAC3-204ENST00000469207 GIMAP4Q9NUV9 329 aa11.02□□□□□ -0.65
HDAC3-204ENST00000469207 ELOVL5Q9NYP7 299 aa11.02□□□□□ -0.65
HDAC3-204ENST00000469207 ADAM21Q9UKJ8 722 aa11.02□□□□□ -0.65
HDAC3-204ENST00000469207 PROCRQ9UNN8 238 aa11.02□□□□□ -0.65
HDAC3-204ENST00000469207 C19orf53Q9UNZ5 99 aaPredicted RBP11.02□□□□□ -0.65
HDAC3-204ENST00000469207 PRR14LQ5THK1 2151 aa11.01□□□□□ -0.65
HDAC3-204ENST00000469207 JMJD1CQ15652 2540 aa11.01□□□□□ -0.65
HDAC3-204ENST00000469207 KLF4O43474 513 aa11.01□□□□□ -0.65
HDAC3-204ENST00000469207 NTN1O95631 604 aa11.01□□□□□ -0.65
HDAC3-204ENST00000469207 SNRPAP09012 282 aaKnown RBP11.01□□□□□ -0.65
HDAC3-204ENST00000469207 CD8BP10966 210 aa11.01□□□□□ -0.65
HDAC3-204ENST00000469207 TAC1P20366 129 aa11.01□□□□□ -0.65
HDAC3-204ENST00000469207 DDCP20711 480 aa11.01□□□□□ -0.65
HDAC3-204ENST00000469207 FPR1P21462 350 aa11.01□□□□□ -0.65
HDAC3-204ENST00000469207 GABRA3P34903 492 aa11.01□□□□□ -0.65
HDAC3-204ENST00000469207 GUSBP1Q15486 140 aa11.01□□□□□ -0.65
HDAC3-204ENST00000469207 FAM71E1Q6IPT2 247 aa11.01□□□□□ -0.65
HDAC3-204ENST00000469207 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.01□□□□□ -0.65
HDAC3-204ENST00000469207 SLC9A6Q92581 669 aa11.01□□□□□ -0.65
HDAC3-204ENST00000469207 EGLN2Q96KS0 407 aa11.01□□□□□ -0.65
HDAC3-204ENST00000469207 BDH2Q9BUT1 245 aa11.01□□□□□ -0.65
HDAC3-204ENST00000469207 TNFRSF12AQ9NP84 129 aa11.01□□□□□ -0.65
HDAC3-204ENST00000469207 ZNF180Q9UJW8 692 aa11.01□□□□□ -0.65
HDAC3-204ENST00000469207 VDAC3Q9Y277 283 aa11.01□□□□□ -0.65
HDAC3-204ENST00000469207 POLR3HQ9Y535 204 aaPredicted RBP11.01□□□□□ -0.65
HDAC3-204ENST00000469207 ZANQ9Y493 2812 aa11.01□□□□□ -0.65
HDAC3-204ENST00000469207 ROS1P08922 2347 aa11.01□□□□□ -0.65
HDAC3-204ENST00000469207 CSPG4Q6UVK1 2322 aa11.01□□□□□ -0.65
HDAC3-204ENST00000469207 A0A087WV62 115 aa11□□□□□ -0.65
HDAC3-204ENST00000469207 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11□□□□□ -0.65
HDAC3-204ENST00000469207 EIF1AYO14602 144 aaKnown RBP11□□□□□ -0.65
HDAC3-204ENST00000469207 UTS2O95399 124 aa11□□□□□ -0.65
HDAC3-204ENST00000469207 CNOT4O95628 575 aaKnown RBP11□□□□□ -0.65
HDAC3-204ENST00000469207 IL33O95760 270 aa11□□□□□ -0.65
HDAC3-204ENST00000469207 ANGPTL1O95841 491 aa11□□□□□ -0.65
HDAC3-204ENST00000469207 ATP5F1P24539 256 aaPredicted RBP11□□□□□ -0.65
HDAC3-204ENST00000469207 EIF1AXP47813 144 aaKnown RBP11□□□□□ -0.65
HDAC3-204ENST00000469207 PTH2RP49190 550 aa11□□□□□ -0.65
HDAC3-204ENST00000469207 EEFSECP57772 596 aaKnown RBP11□□□□□ -0.65
HDAC3-204ENST00000469207 DECR1Q16698 335 aa11□□□□□ -0.65
HDAC3-204ENST00000469207 GRAMD1BQ3KR37 738 aa11□□□□□ -0.65
HDAC3-204ENST00000469207 CYP27C1Q4G0S4 372 aa11□□□□□ -0.65
HDAC3-204ENST00000469207 SPIN4Q56A73 249 aa11□□□□□ -0.65
HDAC3-204ENST00000469207 ALKBH2Q6NS38 261 aa11□□□□□ -0.65
HDAC3-204ENST00000469207 ANKRD26P1Q6NSI1 321 aa11□□□□□ -0.65
HDAC3-204ENST00000469207 GALNT18Q6P9A2 607 aa11□□□□□ -0.65
HDAC3-204ENST00000469207 PRSS57Q6UWY2 283 aa11□□□□□ -0.65
HDAC3-204ENST00000469207 FAM214BQ7L5A3 538 aa11□□□□□ -0.65
HDAC3-204ENST00000469207 ZNF551Q7Z340 670 aaPredicted RBP11□□□□□ -0.65
HDAC3-204ENST00000469207 GGNQ86UU5 652 aa11□□□□□ -0.65
HDAC3-204ENST00000469207 SAMD14Q8IZD0 417 aaPredicted RBP11□□□□□ -0.65
HDAC3-204ENST00000469207 METTL25Q8N6Q8 603 aa11□□□□□ -0.65
HDAC3-204ENST00000469207 GBP7Q8N8V2 638 aaPredicted RBP11□□□□□ -0.65
HDAC3-204ENST00000469207 MAPK1IP1LQ8NDC0 245 aa11□□□□□ -0.65
HDAC3-204ENST00000469207 IGFBPL1Q8WX77 278 aa11□□□□□ -0.65
HDAC3-204ENST00000469207 GFM2Q969S9 779 aaKnown RBP11□□□□□ -0.65
HDAC3-204ENST00000469207 ELP4Q96EB1 424 aa11□□□□□ -0.65
HDAC3-204ENST00000469207 AMDHD1Q96NU7 426 aa11□□□□□ -0.65
HDAC3-204ENST00000469207 FMO2Q99518 471 aa11□□□□□ -0.65
HDAC3-204ENST00000469207 PRRG4Q9BZD6 226 aa11□□□□□ -0.65
HDAC3-204ENST00000469207 SHCBP1LQ9BZQ2 653 aa11□□□□□ -0.65
HDAC3-204ENST00000469207 GSTO2Q9H4Y5 243 aa11□□□□□ -0.65
HDAC3-204ENST00000469207 PTGES2Q9H7Z7 377 aa11□□□□□ -0.65
HDAC3-204ENST00000469207 MID1IP1Q9NPA3 183 aa11□□□□□ -0.65
HDAC3-204ENST00000469207 SDHAF3Q9NRP4 125 aa11□□□□□ -0.65
HDAC3-204ENST00000469207 PLSCR4Q9NRQ2 329 aa11□□□□□ -0.65
HDAC3-204ENST00000469207 FBXO34Q9NWN3 711 aa11□□□□□ -0.65
HDAC3-204ENST00000469207 RAI1Q7Z5J4 1906 aaPredicted RBP10.99□□□□□ -0.65
HDAC3-204ENST00000469207 USF3Q68DE3 2245 aa10.99□□□□□ -0.65
HDAC3-204ENST00000469207 A0A087WUV0 522 aaPredicted RBP10.99□□□□□ -0.65
HDAC3-204ENST00000469207 FAM171A2A8MVW0 826 aa10.99□□□□□ -0.65
HDAC3-204ENST00000469207 COQ9O75208 318 aa10.99□□□□□ -0.65
HDAC3-204ENST00000469207 URI1O94763 535 aaPredicted RBP10.99□□□□□ -0.65
HDAC3-204ENST00000469207 PSMG1O95456 288 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms