RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 RPS8P62241 208 aaKnown RBP3.59□□□□□ -1.83
XRN1-207ENST00000468894 GNB2P62879 340 aa3.59□□□□□ -1.83
XRN1-207ENST00000468894 PLOD1Q02809 727 aaPredicted RBP3.59□□□□□ -1.83
XRN1-207ENST00000468894 UBE2V2Q15819 145 aa3.59□□□□□ -1.83
XRN1-207ENST00000468894 CYBRD1Q53TN4 286 aa3.59□□□□□ -1.83
XRN1-207ENST00000468894 SLC39A4Q6P5W5 647 aa3.59□□□□□ -1.83
XRN1-207ENST00000468894 ZNF530Q6P9A1 599 aaPredicted RBP3.59□□□□□ -1.83
XRN1-207ENST00000468894 BTNL3Q6UXE8 466 aa3.59□□□□□ -1.83
XRN1-207ENST00000468894 NFAM1Q8NET5 270 aaPredicted RBP3.59□□□□□ -1.83
XRN1-207ENST00000468894 ARNTL2Q8WYA1 636 aa3.59□□□□□ -1.83
XRN1-207ENST00000468894 RUFY1Q96T51 708 aa3.59□□□□□ -1.83
XRN1-207ENST00000468894 WRAP53Q9BUR4 548 aaKnown RBP3.59□□□□□ -1.83
XRN1-207ENST00000468894 CHMP4BQ9H444 224 aaKnown RBP3.59□□□□□ -1.83
XRN1-207ENST00000468894 THAP9Q9H5L6 903 aa3.59□□□□□ -1.83
XRN1-207ENST00000468894 PNO1Q9NRX1 252 aaKnown RBP3.59□□□□□ -1.83
XRN1-207ENST00000468894 GDAP2Q9NXN4 497 aa3.59□□□□□ -1.83
XRN1-207ENST00000468894 PRO0461Q9UI25 63 aa3.59□□□□□ -1.83
XRN1-207ENST00000468894 L3MBTL1Q9Y468 752 aa3.59□□□□□ -1.83
XRN1-207ENST00000468894 GRIN2DO15399 1336 aa3.59□□□□□ -1.83
XRN1-207ENST00000468894 RPGRIP1LQ68CZ1 1315 aa3.59□□□□□ -1.83
XRN1-207ENST00000468894 CFAP73A6NFT4 308 aa3.58□□□□□ -1.84
XRN1-207ENST00000468894 E9PMD0 336 aa3.58□□□□□ -1.84
XRN1-207ENST00000468894 SGK494L7N484 410 aa3.58□□□□□ -1.84
XRN1-207ENST00000468894 PPIHO43447 177 aaKnown RBP3.58□□□□□ -1.84
XRN1-207ENST00000468894 ZNF861PO60384 105 aa3.58□□□□□ -1.84
XRN1-207ENST00000468894 HSPA1LP34931 641 aa3.58□□□□□ -1.84
XRN1-207ENST00000468894 WNT4P56705 351 aa3.58□□□□□ -1.84
XRN1-207ENST00000468894 RIPK4P57078 832 aa3.58□□□□□ -1.84
XRN1-207ENST00000468894 RPL32P62910 135 aaKnown RBP3.58□□□□□ -1.84
XRN1-207ENST00000468894 SNX1Q13596 522 aa3.58□□□□□ -1.84
XRN1-207ENST00000468894 DPYSL3Q14195 570 aa3.58□□□□□ -1.84
XRN1-207ENST00000468894 KYAT1Q16773 422 aa3.58□□□□□ -1.84
XRN1-207ENST00000468894 WSCD1Q658N2 575 aa3.58□□□□□ -1.84
XRN1-207ENST00000468894 OR6B2Q6IFH4 312 aa3.58□□□□□ -1.84
XRN1-207ENST00000468894 CXCL17Q6UXB2 119 aa3.58□□□□□ -1.84
XRN1-207ENST00000468894 STAC2Q6ZMT1 411 aa3.58□□□□□ -1.84
XRN1-207ENST00000468894 GET4Q7L5D6 327 aaPredicted RBP3.58□□□□□ -1.84
XRN1-207ENST00000468894 SLC13A3Q8WWT9 602 aa3.58□□□□□ -1.84
XRN1-207ENST00000468894 TADA1Q96BN2 335 aa3.58□□□□□ -1.84
XRN1-207ENST00000468894 TMEM80Q96HE8 168 aa3.58□□□□□ -1.84
XRN1-207ENST00000468894 NOL4LQ96MY1 436 aaPredicted RBP3.58□□□□□ -1.84
XRN1-207ENST00000468894 PLEKHF1Q96S99 279 aa3.58□□□□□ -1.84
XRN1-207ENST00000468894 XPO4Q9C0E2 1151 aaKnown RBP3.58□□□□□ -1.84
XRN1-207ENST00000468894 EHD1Q9H4M9 534 aa3.58□□□□□ -1.84
XRN1-207ENST00000468894 RPS6KB2Q9UBS0 482 aa3.58□□□□□ -1.84
XRN1-207ENST00000468894 IL19Q9UHD0 177 aa3.58□□□□□ -1.84
XRN1-207ENST00000468894 IGLV1-47P01700 117 aa3.57□□□□□ -1.84
XRN1-207ENST00000468894 CD55P08174 381 aa3.57□□□□□ -1.84
XRN1-207ENST00000468894 RPL4P36578 427 aaKnown RBP3.57□□□□□ -1.84
XRN1-207ENST00000468894 PPP2R5CQ13362 524 aa3.57□□□□□ -1.84
XRN1-207ENST00000468894 SPATA46Q5T0L3 261 aa3.57□□□□□ -1.84
XRN1-207ENST00000468894 TMEM26Q6ZUK4 368 aa3.57□□□□□ -1.84
XRN1-207ENST00000468894 BPIFB2Q8N4F0 458 aa3.57□□□□□ -1.84
XRN1-207ENST00000468894 PSMG2Q969U7 264 aa3.57□□□□□ -1.84
XRN1-207ENST00000468894 TMEM186Q96B77 213 aa3.57□□□□□ -1.84
XRN1-207ENST00000468894 PLA2G4CQ9UP65 541 aa3.57□□□□□ -1.84
XRN1-207ENST00000468894 IGKV6D-21A0A0A0MT36 114 aa3.56□□□□□ -1.84
XRN1-207ENST00000468894 RNF222A6NCQ9 220 aa3.56□□□□□ -1.84
XRN1-207ENST00000468894 SAGE2PA6NJ88 616 aa3.56□□□□□ -1.84
XRN1-207ENST00000468894 ZSCAN5BA6NJL1 495 aa3.56□□□□□ -1.84
XRN1-207ENST00000468894 RTL8CO15255 209 aa3.56□□□□□ -1.84
XRN1-207ENST00000468894 RALAP11233 206 aa3.56□□□□□ -1.84
XRN1-207ENST00000468894 TSPAN8P19075 237 aa3.56□□□□□ -1.84
XRN1-207ENST00000468894 CDH5P33151 784 aaPredicted RBP3.56□□□□□ -1.84
XRN1-207ENST00000468894 BCL2L1Q07817 233 aa3.56□□□□□ -1.84
XRN1-207ENST00000468894 PSG7Q13046 419 aa3.56□□□□□ -1.84
XRN1-207ENST00000468894 TFDP1Q14186 410 aa3.56□□□□□ -1.84
XRN1-207ENST00000468894 KCNJ11Q14654 390 aa3.56□□□□□ -1.84
XRN1-207ENST00000468894 CCDC40Q4G0X9 1142 aa3.56□□□□□ -1.84
XRN1-207ENST00000468894 OR2B11Q5JQS5 317 aa3.56□□□□□ -1.84
XRN1-207ENST00000468894 OTPQ5XKR4 325 aa3.56□□□□□ -1.84
XRN1-207ENST00000468894 TRPM8Q7Z2W7 1104 aa3.56□□□□□ -1.84
XRN1-207ENST00000468894 MIER3Q7Z3K6 550 aa3.56□□□□□ -1.84
XRN1-207ENST00000468894 MINDY2Q8NBR6 621 aa3.56□□□□□ -1.84
XRN1-207ENST00000468894 OR10H4Q8NGA5 316 aa3.56□□□□□ -1.84
XRN1-207ENST00000468894 NSMCE2Q96MF7 247 aa3.56□□□□□ -1.84
XRN1-207ENST00000468894 TBC1D10AQ9BXI6 508 aa3.56□□□□□ -1.84
XRN1-207ENST00000468894 CCSER1Q9C0I3 900 aa3.56□□□□□ -1.84
XRN1-207ENST00000468894 TMEM231Q9H6L2 316 aa3.56□□□□□ -1.84
XRN1-207ENST00000468894 KAT8Q9H7Z6 458 aaKnown RBP3.56□□□□□ -1.84
XRN1-207ENST00000468894 ANO10Q9NW15 660 aa3.56□□□□□ -1.84
XRN1-207ENST00000468894 CNOT2Q9NZN8 540 aaKnown RBP3.56□□□□□ -1.84
XRN1-207ENST00000468894 GALPQ9UBC7 116 aa3.56□□□□□ -1.84
XRN1-207ENST00000468894 P2RX2Q9UBL9 471 aa3.56□□□□□ -1.84
XRN1-207ENST00000468894 ZNF221Q9UK13 617 aa3.56□□□□□ -1.84
XRN1-207ENST00000468894 NUDCQ9Y266 331 aa3.56□□□□□ -1.84
XRN1-207ENST00000468894 E9PLD3 99 aa3.55□□□□□ -1.84
XRN1-207ENST00000468894 H3BTX0 84 aa3.55□□□□□ -1.84
XRN1-207ENST00000468894 K7ENP7 123 aa3.55□□□□□ -1.84
XRN1-207ENST00000468894 EMC8O43402 210 aa3.55□□□□□ -1.84
XRN1-207ENST00000468894 SCRG1O75711 98 aa3.55□□□□□ -1.84
XRN1-207ENST00000468894 EMDP50402 254 aa3.55□□□□□ -1.84
XRN1-207ENST00000468894 SLC26A2P50443 739 aa3.55□□□□□ -1.84
XRN1-207ENST00000468894 LIM2P55344 173 aa3.55□□□□□ -1.84
XRN1-207ENST00000468894 KRTAP10-8P60410 259 aa3.55□□□□□ -1.84
XRN1-207ENST00000468894 RND3P61587 244 aa3.55□□□□□ -1.84
XRN1-207ENST00000468894 PDIA5Q14554 519 aa3.55□□□□□ -1.84
XRN1-207ENST00000468894 TEX44Q53QW1 395 aa3.55□□□□□ -1.84
XRN1-207ENST00000468894 METTL11BQ5VVY1 283 aa3.55□□□□□ -1.84
XRN1-207ENST00000468894 FRA10AC1Q70Z53 315 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms