RNA–Protein interactions for RNA: ENST00000468542.1

TRIM59-202, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-202ENST00000468542 NXF5Q9H1B4 397 aaKnown RBP3.24□□□□□ -1.89
TRIM59-202ENST00000468542 RAD21L1Q9H4I0 556 aa3.24□□□□□ -1.89
TRIM59-202ENST00000468542 CDCP1Q9H5V8 836 aa3.24□□□□□ -1.89
TRIM59-202ENST00000468542 CXorf36Q9H7Y0 433 aa3.24□□□□□ -1.89
TRIM59-202ENST00000468542 FOLH1BQ9HBA9 442 aa3.24□□□□□ -1.89
TRIM59-202ENST00000468542 SERHLQ9NQF3 203 aa3.24□□□□□ -1.89
TRIM59-202ENST00000468542 SAR1AQ9NR31 198 aa3.24□□□□□ -1.89
TRIM59-202ENST00000468542 AGPAT4Q9NRZ5 378 aa3.24□□□□□ -1.89
TRIM59-202ENST00000468542 SACM1LQ9NTJ5 587 aa3.24□□□□□ -1.89
TRIM59-202ENST00000468542 ZCCHC3Q9NUD5 404 aaKnown RBP3.24□□□□□ -1.89
TRIM59-202ENST00000468542 LRFN1Q9P244 771 aa3.24□□□□□ -1.89
TRIM59-202ENST00000468542 BCAP29Q9UHQ4 241 aa3.24□□□□□ -1.89
TRIM59-202ENST00000468542 LEF1Q9UJU2 399 aaPredicted RBP3.24□□□□□ -1.89
TRIM59-202ENST00000468542 DCTN4Q9UJW0 460 aa3.24□□□□□ -1.89
TRIM59-202ENST00000468542 VPS4AQ9UN37 437 aa3.24□□□□□ -1.89
TRIM59-202ENST00000468542 FAF1Q9UNN5 650 aaPredicted RBP3.24□□□□□ -1.89
TRIM59-202ENST00000468542 ERVK-11Q9UQG0 969 aa3.24□□□□□ -1.89
TRIM59-202ENST00000468542 LIPT1Q9Y234 373 aa3.24□□□□□ -1.89
TRIM59-202ENST00000468542 NPFFR2Q9Y5X5 522 aa3.24□□□□□ -1.89
TRIM59-202ENST00000468542 NCKAP5O14513 1909 aa3.24□□□□□ -1.89
TRIM59-202ENST00000468542 TACC2O95359 2948 aa3.24□□□□□ -1.89
TRIM59-202ENST00000468542 DCHS2Q6V1P9 2916 aa3.24□□□□□ -1.89
TRIM59-202ENST00000468542 SVILO95425 2214 aa3.24□□□□□ -1.89
TRIM59-202ENST00000468542 ZNF407Q9C0G0 2248 aa3.24□□□□□ -1.89
TRIM59-202ENST00000468542 PHF3Q92576 2039 aaKnown RBP3.24□□□□□ -1.89
TRIM59-202ENST00000468542 UNC79Q9P2D8 2635 aa3.23□□□□□ -1.89
TRIM59-202ENST00000468542 ITPR2Q14571 2701 aa3.23□□□□□ -1.89
TRIM59-202ENST00000468542 A0A096LPI6 279 aa3.23□□□□□ -1.89
TRIM59-202ENST00000468542 IGLV3-32A0A0A0MS00 114 aa3.23□□□□□ -1.89
TRIM59-202ENST00000468542 TRBV5-3A0A0A0MS03 114 aa3.23□□□□□ -1.89
TRIM59-202ENST00000468542 C15orf38-AP3S2A0A0A6YYH1 394 aa3.23□□□□□ -1.89
TRIM59-202ENST00000468542 RNF103-CHMP3A0A140T963 221 aa3.23□□□□□ -1.89
TRIM59-202ENST00000468542 OR14I1A6ND48 311 aa3.23□□□□□ -1.89
TRIM59-202ENST00000468542 CCDC154A6NI56 674 aa3.23□□□□□ -1.89
TRIM59-202ENST00000468542 EIF4E1BA6NMX2 242 aaKnown RBP3.23□□□□□ -1.89
TRIM59-202ENST00000468542 ALG1L2C9J202 215 aa3.23□□□□□ -1.89
TRIM59-202ENST00000468542 LINC01387J3KSC0 135 aa3.23□□□□□ -1.89
TRIM59-202ENST00000468542 K7EM74 188 aa3.23□□□□□ -1.89
TRIM59-202ENST00000468542 ACOT7O00154 380 aa3.23□□□□□ -1.89
TRIM59-202ENST00000468542 MASP2O00187 686 aa3.23□□□□□ -1.89
TRIM59-202ENST00000468542 WWP2O00308 870 aa3.23□□□□□ -1.89
TRIM59-202ENST00000468542 NDUFAB1O14561 156 aa3.23□□□□□ -1.89
TRIM59-202ENST00000468542 ANGPT2O15123 496 aa3.23□□□□□ -1.89
TRIM59-202ENST00000468542 HS6ST1O60243 411 aa3.23□□□□□ -1.89
TRIM59-202ENST00000468542 TSPAN2O60636 221 aa3.23□□□□□ -1.89
TRIM59-202ENST00000468542 ZNF354AO60765 605 aaPredicted RBP3.23□□□□□ -1.89
TRIM59-202ENST00000468542 FLNBO75369 2602 aaKnown RBP3.23□□□□□ -1.89
TRIM59-202ENST00000468542 TRIM3O75382 744 aaPredicted RBP3.23□□□□□ -1.89
TRIM59-202ENST00000468542 DCTN3O75935 186 aa3.23□□□□□ -1.89
TRIM59-202ENST00000468542 C1QL1O75973 258 aa3.23□□□□□ -1.89
TRIM59-202ENST00000468542 GLSO94925 669 aaPredicted RBP3.23□□□□□ -1.89
TRIM59-202ENST00000468542 OR6B1O95007 311 aa3.23□□□□□ -1.89
TRIM59-202ENST00000468542 KCNK2O95069 426 aa3.23□□□□□ -1.89
TRIM59-202ENST00000468542 RASAL1O95294 804 aa3.23□□□□□ -1.89
TRIM59-202ENST00000468542 IL33O95760 270 aa3.23□□□□□ -1.89
TRIM59-202ENST00000468542 P04436 131 aa3.23□□□□□ -1.89
TRIM59-202ENST00000468542 SNRPB2P08579 225 aaKnown RBP3.23□□□□□ -1.89
TRIM59-202ENST00000468542 ALOX5P09917 674 aa3.23□□□□□ -1.89
TRIM59-202ENST00000468542 ZNF24P17028 368 aa3.23□□□□□ -1.89
TRIM59-202ENST00000468542 HOXB9P17482 250 aaPredicted RBP3.23□□□□□ -1.89
TRIM59-202ENST00000468542 GPX2P18283 190 aa3.23□□□□□ -1.89
TRIM59-202ENST00000468542 NCF2P19878 526 aaPredicted RBP3.23□□□□□ -1.89
TRIM59-202ENST00000468542 CAPN3P20807 821 aa3.23□□□□□ -1.89
TRIM59-202ENST00000468542 CNR1P21554 472 aa3.23□□□□□ -1.89
TRIM59-202ENST00000468542 DRD4P21917 467 aa3.23□□□□□ -1.89
TRIM59-202ENST00000468542 PRDX6P30041 224 aa3.23□□□□□ -1.89
TRIM59-202ENST00000468542 SOX3P41225 446 aa3.23□□□□□ -1.89
TRIM59-202ENST00000468542 KHKP50053 298 aa3.23□□□□□ -1.89
TRIM59-202ENST00000468542 CDK9P50750 372 aaKnown RBP3.23□□□□□ -1.89
TRIM59-202ENST00000468542 NR0B1P51843 470 aaKnown RBP3.23□□□□□ -1.89
TRIM59-202ENST00000468542 MNAT1P51948 309 aa3.23□□□□□ -1.89
TRIM59-202ENST00000468542 DGKQP52824 942 aa3.23□□□□□ -1.89
TRIM59-202ENST00000468542 MVDP53602 400 aa3.23□□□□□ -1.89
TRIM59-202ENST00000468542 CORO7P57737 925 aa3.23□□□□□ -1.89
TRIM59-202ENST00000468542 GNGT1P63211 74 aa3.23□□□□□ -1.89
TRIM59-202ENST00000468542 PLCXD2Q0VAA5 305 aa3.23□□□□□ -1.89
TRIM59-202ENST00000468542 C19orf57Q0VDD7 668 aa3.23□□□□□ -1.89
TRIM59-202ENST00000468542 FOXO1Q12778 655 aa3.23□□□□□ -1.89
TRIM59-202ENST00000468542 ZNF155Q12901 538 aaPredicted RBP3.23□□□□□ -1.89
TRIM59-202ENST00000468542 NFATC3Q12968 1075 aa3.23□□□□□ -1.89
TRIM59-202ENST00000468542 STX5Q13190 355 aa3.23□□□□□ -1.89
TRIM59-202ENST00000468542 GAB1Q13480 694 aa3.23□□□□□ -1.89
TRIM59-202ENST00000468542 RAPSNQ13702 412 aa3.23□□□□□ -1.89
TRIM59-202ENST00000468542 LY6DQ14210 128 aa3.23□□□□□ -1.89
TRIM59-202ENST00000468542 GANABQ14697 944 aaKnown RBP3.23□□□□□ -1.89
TRIM59-202ENST00000468542 LASP1Q14847 261 aaKnown RBP3.23□□□□□ -1.89
TRIM59-202ENST00000468542 EXOSC7Q15024 291 aaKnown RBP3.23□□□□□ -1.89
TRIM59-202ENST00000468542 DUSP5Q16690 384 aa3.23□□□□□ -1.89
TRIM59-202ENST00000468542 ZSWIM7Q19AV6 140 aa3.23□□□□□ -1.89
TRIM59-202ENST00000468542 PGS1Q32NB8 556 aa3.23□□□□□ -1.89
TRIM59-202ENST00000468542 TRMT5Q32P41 509 aaKnown RBP3.23□□□□□ -1.89
TRIM59-202ENST00000468542 PLEKHN1Q494U1 663 aaPredicted RBP3.23□□□□□ -1.89
TRIM59-202ENST00000468542 SPDYE7PQ495Y7 208 aa3.23□□□□□ -1.89
TRIM59-202ENST00000468542 SPATS1Q496A3 300 aa3.23□□□□□ -1.89
TRIM59-202ENST00000468542 NADK2Q4G0N4 442 aa3.23□□□□□ -1.89
TRIM59-202ENST00000468542 TIGD2Q4W5G0 525 aa3.23□□□□□ -1.89
TRIM59-202ENST00000468542 ATAD3BQ5T9A4 648 aa3.23□□□□□ -1.89
TRIM59-202ENST00000468542 GKAP1Q5VSY0 366 aaPredicted RBP3.23□□□□□ -1.89
TRIM59-202ENST00000468542 ZNF324BQ6AW86 544 aaPredicted RBP3.23□□□□□ -1.89
TRIM59-202ENST00000468542 SPINK14Q6IE38 97 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms