RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 STUB1Q9UNE7 303 aa8.24□□□□□ -1.09
HPS4-209ENST00000466781 TRBV11-1A0A0K0K1C0 115 aa8.24□□□□□ -1.09
HPS4-209ENST00000466781 LATO43561 262 aa8.24□□□□□ -1.09
HPS4-209ENST00000466781 TPPPO94811 219 aa8.24□□□□□ -1.09
HPS4-209ENST00000466781 HPRP00739 348 aa8.24□□□□□ -1.09
HPS4-209ENST00000466781 SPINT3P49223 89 aa8.24□□□□□ -1.09
HPS4-209ENST00000466781 PITX1P78337 314 aaPredicted RBP8.24□□□□□ -1.09
HPS4-209ENST00000466781 ARL6IP1Q15041 203 aa8.24□□□□□ -1.09
HPS4-209ENST00000466781 PPP1R3AQ16821 1122 aa8.24□□□□□ -1.09
HPS4-209ENST00000466781 TPRA1Q86W33 373 aa8.24□□□□□ -1.09
HPS4-209ENST00000466781 ACVR1CQ8NER5 493 aa8.24□□□□□ -1.09
HPS4-209ENST00000466781 TBC1D20Q96BZ9 403 aa8.24□□□□□ -1.09
HPS4-209ENST00000466781 MRPL38Q96DV4 380 aaKnown RBP8.24□□□□□ -1.09
HPS4-209ENST00000466781 FAM71F1Q96KD3 344 aaPredicted RBP8.24□□□□□ -1.09
HPS4-209ENST00000466781 ZFP57Q9NU63 452 aa8.24□□□□□ -1.09
HPS4-209ENST00000466781 LRFN1Q9P244 771 aa8.24□□□□□ -1.09
HPS4-209ENST00000466781 SRPK3Q9UPE1 567 aa8.24□□□□□ -1.09
HPS4-209ENST00000466781 DOCK2Q92608 1830 aa8.24□□□□□ -1.09
HPS4-209ENST00000466781 SULT2B1O00204 365 aa8.24□□□□□ -1.09
HPS4-209ENST00000466781 KLF11O14901 512 aa8.24□□□□□ -1.09
HPS4-209ENST00000466781 RRP8O43159 456 aaKnown RBP8.24□□□□□ -1.09
HPS4-209ENST00000466781 PRKYO43930 277 aa8.24□□□□□ -1.09
HPS4-209ENST00000466781 CREBL2O60519 120 aaPredicted RBP8.24□□□□□ -1.09
HPS4-209ENST00000466781 DNAJB6O75190 326 aa8.24□□□□□ -1.09
HPS4-209ENST00000466781 TNFRSF4P43489 277 aa8.24□□□□□ -1.09
HPS4-209ENST00000466781 OR7A5Q15622 319 aa8.24□□□□□ -1.09
HPS4-209ENST00000466781 PLCXD3Q63HM9 321 aa8.24□□□□□ -1.09
HPS4-209ENST00000466781 PHC2Q8IXK0 858 aa8.24□□□□□ -1.09
HPS4-209ENST00000466781 DTX3Q8N9I9 347 aa8.24□□□□□ -1.09
HPS4-209ENST00000466781 KDM1BQ8NB78 822 aa8.24□□□□□ -1.09
HPS4-209ENST00000466781 CNIH3Q8TBE1 160 aa8.24□□□□□ -1.09
HPS4-209ENST00000466781 SENP5Q96HI0 755 aaPredicted RBP8.24□□□□□ -1.09
HPS4-209ENST00000466781 SACM1LQ9NTJ5 587 aa8.24□□□□□ -1.09
HPS4-209ENST00000466781 ANKMY1Q9P2S6 941 aa8.24□□□□□ -1.09
HPS4-209ENST00000466781 PCTPQ9UKL6 214 aa8.24□□□□□ -1.09
HPS4-209ENST00000466781 ENTPD2Q9Y5L3 495 aa8.24□□□□□ -1.09
HPS4-209ENST00000466781 ACTL7AQ9Y615 435 aa8.24□□□□□ -1.09
HPS4-209ENST00000466781 TRAPPC13A5PLN9 417 aa8.24□□□□□ -1.09
HPS4-209ENST00000466781 F5H5K5 113 aa8.24□□□□□ -1.09
HPS4-209ENST00000466781 OR8U9P0C7N5 309 aa8.24□□□□□ -1.09
HPS4-209ENST00000466781 RAB3AP20336 220 aa8.24□□□□□ -1.09
HPS4-209ENST00000466781 AGTR1P30556 359 aa8.24□□□□□ -1.09
HPS4-209ENST00000466781 GABRA2P47869 451 aa8.24□□□□□ -1.09
HPS4-209ENST00000466781 CSNK1A1P48729 337 aa8.24□□□□□ -1.09
HPS4-209ENST00000466781 ZNF45Q02386 682 aa8.24□□□□□ -1.09
HPS4-209ENST00000466781 RNASE10Q5GAN6 216 aaKnown RBP8.24□□□□□ -1.09
HPS4-209ENST00000466781 MARCH8Q5T0T0 291 aa8.24□□□□□ -1.09
HPS4-209ENST00000466781 C22orf42Q6IC83 251 aa8.24□□□□□ -1.09
HPS4-209ENST00000466781 VN1R2Q8NFZ6 395 aa8.24□□□□□ -1.09
HPS4-209ENST00000466781 SLC2A12Q8TD20 617 aa8.24□□□□□ -1.09
HPS4-209ENST00000466781 NPRL2Q8WTW4 380 aa8.24□□□□□ -1.09
HPS4-209ENST00000466781 TSPAN10Q9H1Z9 355 aaPredicted RBP8.24□□□□□ -1.09
HPS4-209ENST00000466781 TMEM165Q9HC07 324 aa8.24□□□□□ -1.09
HPS4-209ENST00000466781 OBP2BQ9NPH6 170 aa8.24□□□□□ -1.09
HPS4-209ENST00000466781 ZDHHC18Q9NUE0 388 aa8.24□□□□□ -1.09
HPS4-209ENST00000466781 MRPL15Q9P015 296 aaKnown RBP8.24□□□□□ -1.09
HPS4-209ENST00000466781 EEDO75530 441 aaKnown RBP8.23□□□□□ -1.09
HPS4-209ENST00000466781 SERPINA5P05154 406 aa8.23□□□□□ -1.09
HPS4-209ENST00000466781 UBL4AP11441 157 aa8.23□□□□□ -1.09
HPS4-209ENST00000466781 MSR1P21757 451 aa8.23□□□□□ -1.09
HPS4-209ENST00000466781 CD70P32970 193 aa8.23□□□□□ -1.09
HPS4-209ENST00000466781 MAP2K4P45985 399 aa8.23□□□□□ -1.09
HPS4-209ENST00000466781 ALDH3B2P48448 385 aa8.23□□□□□ -1.09
HPS4-209ENST00000466781 ZNF136P52737 540 aa8.23□□□□□ -1.09
HPS4-209ENST00000466781 RIPPLY1Q0D2K3 151 aa8.23□□□□□ -1.09
HPS4-209ENST00000466781 TECRLQ5HYJ1 363 aa8.23□□□□□ -1.09
HPS4-209ENST00000466781 IGFN1Q86VF2 1251 aa8.23□□□□□ -1.09
HPS4-209ENST00000466781 MARVELD2Q8N4S9 558 aa8.23□□□□□ -1.09
HPS4-209ENST00000466781 TANKQ92844 425 aa8.23□□□□□ -1.09
HPS4-209ENST00000466781 MUCL1Q96DR8 90 aa8.23□□□□□ -1.09
HPS4-209ENST00000466781 AMDHD1Q96NU7 426 aa8.23□□□□□ -1.09
HPS4-209ENST00000466781 NSUN5Q96P11 429 aaKnown RBP8.23□□□□□ -1.09
HPS4-209ENST00000466781 KCMF1Q9P0J7 381 aa8.23□□□□□ -1.09
HPS4-209ENST00000466781 EDARQ9UNE0 448 aa8.23□□□□□ -1.09
HPS4-209ENST00000466781 VDAC3Q9Y277 283 aa8.23□□□□□ -1.09
HPS4-209ENST00000466781 TMEM265A0A087WTH1 108 aa8.23□□□□□ -1.09
HPS4-209ENST00000466781 A0A1B0GV50 99 aa8.23□□□□□ -1.09
HPS4-209ENST00000466781 SOBPA7XYQ1 873 aa8.23□□□□□ -1.09
HPS4-209ENST00000466781 A8MXE2 369 aa8.23□□□□□ -1.09
HPS4-209ENST00000466781 TMEM189-UBE2V1I3L0A0 370 aa8.23□□□□□ -1.09
HPS4-209ENST00000466781 MYOGP15173 224 aa8.23□□□□□ -1.09
HPS4-209ENST00000466781 ZNF182P17025 639 aaPredicted RBP8.23□□□□□ -1.09
HPS4-209ENST00000466781 TSFMP43897 325 aaKnown RBP8.23□□□□□ -1.09
HPS4-209ENST00000466781 WNT7BP56706 349 aa8.23□□□□□ -1.09
HPS4-209ENST00000466781 ACTBP60709 375 aa8.23□□□□□ -1.09
HPS4-209ENST00000466781 ACTG1P63261 375 aa8.23□□□□□ -1.09
HPS4-209ENST00000466781 RAB6CQ53S08 254 aa8.23□□□□□ -1.09
HPS4-209ENST00000466781 KANK2Q63ZY3 851 aa8.23□□□□□ -1.09
HPS4-209ENST00000466781 PSAPL1Q6NUJ1 521 aa8.23□□□□□ -1.09
HPS4-209ENST00000466781 OR11L1Q8NGX0 322 aa8.23□□□□□ -1.09
HPS4-209ENST00000466781 FIBINQ8TAL6 211 aa8.23□□□□□ -1.09
HPS4-209ENST00000466781 NDNFQ8TB73 568 aa8.23□□□□□ -1.09
HPS4-209ENST00000466781 TSPEARQ8WU66 669 aa8.23□□□□□ -1.09
HPS4-209ENST00000466781 RAB6CQ9H0N0 254 aa8.23□□□□□ -1.09
HPS4-209ENST00000466781 MTG2Q9H4K7 406 aa8.23□□□□□ -1.09
HPS4-209ENST00000466781 PLEKHJ1Q9NW61 149 aa8.23□□□□□ -1.09
HPS4-209ENST00000466781 KLHL9Q9P2J3 617 aa8.23□□□□□ -1.09
HPS4-209ENST00000466781 HCSTQ9UBK5 93 aa8.23□□□□□ -1.09
HPS4-209ENST00000466781 BOKQ9UMX3 212 aaPredicted RBP8.23□□□□□ -1.09
HPS4-209ENST00000466781 SGK494L7N484 410 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms