RNA–Protein interactions for RNA: ENST00000466763.5

UBA3-209, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-209ENST00000466763 FLRT3Q9NZU0 649 aa12.72□□□□□ -0.37
UBA3-209ENST00000466763 LEF1Q9UJU2 399 aaPredicted RBP12.72□□□□□ -0.37
UBA3-209ENST00000466763 NDUFAF1Q9Y375 327 aa12.72□□□□□ -0.37
UBA3-209ENST00000466763 FREM3P0C091 2139 aa12.71□□□□□ -0.37
UBA3-209ENST00000466763 ESPL1Q14674 2120 aa12.71□□□□□ -0.37
UBA3-209ENST00000466763 KALRNO60229 2985 aa12.71□□□□□ -0.37
UBA3-209ENST00000466763 BSNQ9UPA5 3926 aa12.71□□□□□ -0.37
UBA3-209ENST00000466763 A0A096LPI6 279 aa12.71□□□□□ -0.37
UBA3-209ENST00000466763 NPIPA5A0A0B4J1W7 369 aa12.71□□□□□ -0.37
UBA3-209ENST00000466763 ANKUB1A6NFN9 424 aa12.71□□□□□ -0.37
UBA3-209ENST00000466763 NPIPA7E9PJI5 369 aa12.71□□□□□ -0.37
UBA3-209ENST00000466763 WISP2O76076 250 aa12.71□□□□□ -0.37
UBA3-209ENST00000466763 UNC5CO95185 931 aa12.71□□□□□ -0.37
UBA3-209ENST00000466763 AGR2O95994 175 aa12.71□□□□□ -0.37
UBA3-209ENST00000466763 NPIPA8P0DM63 369 aa12.71□□□□□ -0.37
UBA3-209ENST00000466763 EDN3P14138 238 aa12.71□□□□□ -0.37
UBA3-209ENST00000466763 GNLYP22749 145 aa12.71□□□□□ -0.37
UBA3-209ENST00000466763 GDF1P27539 372 aa12.71□□□□□ -0.37
UBA3-209ENST00000466763 EVI2BP34910 448 aa12.71□□□□□ -0.37
UBA3-209ENST00000466763 CRATP43155 626 aa12.71□□□□□ -0.37
UBA3-209ENST00000466763 MAGEA5P43359 124 aa12.71□□□□□ -0.37
UBA3-209ENST00000466763 FOXO1Q12778 655 aa12.71□□□□□ -0.37
UBA3-209ENST00000466763 KLF10Q13118 480 aa12.71□□□□□ -0.37
UBA3-209ENST00000466763 MRPL49Q13405 166 aaKnown RBP12.71□□□□□ -0.37
UBA3-209ENST00000466763 SNTA1Q13424 505 aa12.71□□□□□ -0.37
UBA3-209ENST00000466763 GRAMD1BQ3KR37 738 aa12.71□□□□□ -0.37
UBA3-209ENST00000466763 GPAT3Q53EU6 434 aa12.71□□□□□ -0.37
UBA3-209ENST00000466763 EXOSC6Q5RKV6 272 aaKnown RBP12.71□□□□□ -0.37
UBA3-209ENST00000466763 ZNF324BQ6AW86 544 aaPredicted RBP12.71□□□□□ -0.37
UBA3-209ENST00000466763 OR5M10Q6IEU7 315 aa12.71□□□□□ -0.37
UBA3-209ENST00000466763 ZAR1Q86SH2 424 aa12.71□□□□□ -0.37
UBA3-209ENST00000466763 MARCH3Q86UD3 253 aa12.71□□□□□ -0.37
UBA3-209ENST00000466763 TMEM251Q8N6I4 163 aa12.71□□□□□ -0.37
UBA3-209ENST00000466763 GALNT11Q8NCW6 608 aa12.71□□□□□ -0.37
UBA3-209ENST00000466763 OR52N2Q8NGI0 321 aa12.71□□□□□ -0.37
UBA3-209ENST00000466763 OR1J4Q8NGS1 313 aa12.71□□□□□ -0.37
UBA3-209ENST00000466763 ZFP90Q8TF47 636 aa12.71□□□□□ -0.37
UBA3-209ENST00000466763 AURKBQ96GD4 344 aaPredicted RBP12.71□□□□□ -0.37
UBA3-209ENST00000466763 PAIP1Q9H074 479 aaKnown RBP12.71□□□□□ -0.37
UBA3-209ENST00000466763 LDAHQ9H6V9 325 aa12.71□□□□□ -0.37
UBA3-209ENST00000466763 EXO5Q9H790 373 aa12.71□□□□□ -0.37
UBA3-209ENST00000466763 TPT1P8Q9HAU6 139 aa12.71□□□□□ -0.37
UBA3-209ENST00000466763 MRGBPQ9NV56 204 aa12.71□□□□□ -0.37
UBA3-209ENST00000466763 B4GALT7Q9UBV7 327 aa12.71□□□□□ -0.37
UBA3-209ENST00000466763 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.71□□□□□ -0.37
UBA3-209ENST00000466763 PCDHB14Q9Y5E9 798 aa12.71□□□□□ -0.37
UBA3-209ENST00000466763 LOC100653049A0A140TA62 436 aa12.7□□□□□ -0.38
UBA3-209ENST00000466763 SCDO00767 359 aa12.7□□□□□ -0.38
UBA3-209ENST00000466763 ASNA1O43681 348 aa12.7□□□□□ -0.38
UBA3-209ENST00000466763 CCDC22O60826 627 aa12.7□□□□□ -0.38
UBA3-209ENST00000466763 TRIM3O75382 744 aaPredicted RBP12.7□□□□□ -0.38
UBA3-209ENST00000466763 TRAPPC6AO75865 159 aa12.7□□□□□ -0.38
UBA3-209ENST00000466763 KRT34O76011 436 aa12.7□□□□□ -0.38
UBA3-209ENST00000466763 RFPL3SP0C7P2 107 aa12.7□□□□□ -0.38
UBA3-209ENST00000466763 ZCCHC18P0CG32 403 aa12.7□□□□□ -0.38
UBA3-209ENST00000466763 PTGDSP41222 190 aa12.7□□□□□ -0.38
UBA3-209ENST00000466763 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.7□□□□□ -0.38
UBA3-209ENST00000466763 MMEL1Q495T6 779 aa12.7□□□□□ -0.38
UBA3-209ENST00000466763 FLYWCH1Q4VC44 716 aa12.7□□□□□ -0.38
UBA3-209ENST00000466763 KRTCAP3Q53RY4 240 aa12.7□□□□□ -0.38
UBA3-209ENST00000466763 COX20Q5RI15 118 aa12.7□□□□□ -0.38
UBA3-209ENST00000466763 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.7□□□□□ -0.38
UBA3-209ENST00000466763 OLIG3Q7RTU3 272 aa12.7□□□□□ -0.38
UBA3-209ENST00000466763 FAM109AQ8N4B1 249 aa12.7□□□□□ -0.38
UBA3-209ENST00000466763 ZNF614Q8N883 585 aa12.7□□□□□ -0.38
UBA3-209ENST00000466763 GATSQ8NAP1 163 aa12.7□□□□□ -0.38
UBA3-209ENST00000466763 OR4C3Q8NH37 302 aa12.7□□□□□ -0.38
UBA3-209ENST00000466763 FAM110BQ8TC76 370 aa12.7□□□□□ -0.38
UBA3-209ENST00000466763 MIPOL1Q8TD10 442 aa12.7□□□□□ -0.38
UBA3-209ENST00000466763 TMEM41AQ96HV5 264 aa12.7□□□□□ -0.38
UBA3-209ENST00000466763 GPR137Q96N19 417 aa12.7□□□□□ -0.38
UBA3-209ENST00000466763 GNRHR2Q96P88 292 aa12.7□□□□□ -0.38
UBA3-209ENST00000466763 BARD1Q99728 777 aaKnown RBP12.7□□□□□ -0.38
UBA3-209ENST00000466763 SLX1AQ9BQ83 275 aa12.7□□□□□ -0.38
UBA3-209ENST00000466763 NMUR2Q9GZQ4 415 aa12.7□□□□□ -0.38
UBA3-209ENST00000466763 SLC52A3Q9NQ40 469 aa12.7□□□□□ -0.38
UBA3-209ENST00000466763 SDHAF3Q9NRP4 125 aa12.7□□□□□ -0.38
UBA3-209ENST00000466763 SLAMF8Q9P0V8 285 aa12.7□□□□□ -0.38
UBA3-209ENST00000466763 PPP4R1LQ9P1A2 415 aa12.7□□□□□ -0.38
UBA3-209ENST00000466763 ARMCX1Q9P291 453 aa12.7□□□□□ -0.38
UBA3-209ENST00000466763 WIF1Q9Y5W5 379 aa12.7□□□□□ -0.38
UBA3-209ENST00000466763 CAPN7Q9Y6W3 813 aa12.7□□□□□ -0.38
UBA3-209ENST00000466763 DNAJC13O75165 2243 aa12.7□□□□□ -0.38
UBA3-209ENST00000466763 CFAP46Q8IYW2 2715 aa12.69□□□□□ -0.38
UBA3-209ENST00000466763 ZNF407Q9C0G0 2248 aa12.69□□□□□ -0.38
UBA3-209ENST00000466763 LRRC3CA6NJW4 275 aa12.69□□□□□ -0.38
UBA3-209ENST00000466763 CLIC1O00299 241 aa12.69□□□□□ -0.38
UBA3-209ENST00000466763 ZNHIT1O43257 154 aa12.69□□□□□ -0.38
UBA3-209ENST00000466763 GMFGO60234 142 aa12.69□□□□□ -0.38
UBA3-209ENST00000466763 FADS1O60427 444 aa12.69□□□□□ -0.38
UBA3-209ENST00000466763 SNX3O60493 162 aa12.69□□□□□ -0.38
UBA3-209ENST00000466763 CBX6O95503 412 aa12.69□□□□□ -0.38
UBA3-209ENST00000466763 OXSR1O95747 527 aaPredicted RBP12.69□□□□□ -0.38
UBA3-209ENST00000466763 AK1P00568 194 aa12.69□□□□□ -0.38
UBA3-209ENST00000466763 ETFAP13804 333 aa12.69□□□□□ -0.38
UBA3-209ENST00000466763 UQCRFS1P47985 274 aa12.69□□□□□ -0.38
UBA3-209ENST00000466763 RNF144AP50876 292 aaPredicted RBP12.69□□□□□ -0.38
UBA3-209ENST00000466763 TDGF1P3P51864 188 aa12.69□□□□□ -0.38
UBA3-209ENST00000466763 HPCAP84074 193 aa12.69□□□□□ -0.38
UBA3-209ENST00000466763 HSF1Q00613 529 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms