RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 CAPGP40121 348 aa12.83□□□□□ -0.36
HDAC6-215ENST00000465457 VSX2P58304 361 aaPredicted RBP12.83□□□□□ -0.36
HDAC6-215ENST00000465457 CDSNQ15517 529 aa12.83□□□□□ -0.36
HDAC6-215ENST00000465457 PRTGQ2VWP7 1150 aa12.83□□□□□ -0.36
HDAC6-215ENST00000465457 C6orf52Q5T4I8 152 aa12.83□□□□□ -0.36
HDAC6-215ENST00000465457 C18orf63Q68DL7 685 aa12.83□□□□□ -0.36
HDAC6-215ENST00000465457 KRT80Q6KB66 452 aa12.83□□□□□ -0.36
HDAC6-215ENST00000465457 UGT2A3Q6UWM9 527 aa12.83□□□□□ -0.36
HDAC6-215ENST00000465457 PPP1R32Q7Z5V6 425 aa12.83□□□□□ -0.36
HDAC6-215ENST00000465457 MCATQ8IVS2 390 aaKnown RBP12.83□□□□□ -0.36
HDAC6-215ENST00000465457 OR4N4Q8N0Y3 316 aa12.83□□□□□ -0.36
HDAC6-215ENST00000465457 LGI4Q8N135 537 aa12.83□□□□□ -0.36
HDAC6-215ENST00000465457 DNAJC22Q8N4W6 341 aa12.83□□□□□ -0.36
HDAC6-215ENST00000465457 DHRSXQ8N5I4 330 aa12.83□□□□□ -0.36
HDAC6-215ENST00000465457 BBS10Q8TAM1 723 aa12.83□□□□□ -0.36
HDAC6-215ENST00000465457 SUN3Q8TAQ9 357 aa12.83□□□□□ -0.36
HDAC6-215ENST00000465457 MAGEE2Q8TD90 523 aaPredicted RBP12.83□□□□□ -0.36
HDAC6-215ENST00000465457 MAL2Q969L2 176 aa12.83□□□□□ -0.36
HDAC6-215ENST00000465457 C10orf90Q96M02 699 aa12.83□□□□□ -0.36
HDAC6-215ENST00000465457 ZNF285Q96NJ3 590 aa12.83□□□□□ -0.36
HDAC6-215ENST00000465457 EPYCQ99645 322 aa12.83□□□□□ -0.36
HDAC6-215ENST00000465457 BTBD2Q9BX70 525 aa12.83□□□□□ -0.36
HDAC6-215ENST00000465457 KLHL25Q9H0H3 589 aa12.83□□□□□ -0.36
HDAC6-215ENST00000465457 REEP1Q9H902 201 aa12.83□□□□□ -0.36
HDAC6-215ENST00000465457 ENAMQ9NRM1 1142 aa12.83□□□□□ -0.36
HDAC6-215ENST00000465457 PNPLA3Q9NST1 481 aa12.83□□□□□ -0.36
HDAC6-215ENST00000465457 P4HTMQ9NXG6 502 aa12.83□□□□□ -0.36
HDAC6-215ENST00000465457 CALML5Q9NZT1 146 aa12.83□□□□□ -0.36
HDAC6-215ENST00000465457 NTMQ9P121 344 aa12.83□□□□□ -0.36
HDAC6-215ENST00000465457 PTGFRNQ9P2B2 879 aa12.83□□□□□ -0.36
HDAC6-215ENST00000465457 LIPT1Q9Y234 373 aa12.83□□□□□ -0.36
HDAC6-215ENST00000465457 MRPS33Q9Y291 106 aaKnown RBP12.83□□□□□ -0.36
HDAC6-215ENST00000465457 SLC9B1P1A6NJY1 282 aa12.82□□□□□ -0.36
HDAC6-215ENST00000465457 GLOD5A6NK44 160 aa12.82□□□□□ -0.36
HDAC6-215ENST00000465457 DUXAA6NLW8 204 aa12.82□□□□□ -0.36
HDAC6-215ENST00000465457 PDLIM1O00151 329 aa12.82□□□□□ -0.36
HDAC6-215ENST00000465457 PLOD2O00469 737 aa12.82□□□□□ -0.36
HDAC6-215ENST00000465457 ALPLP05186 524 aa12.82□□□□□ -0.36
HDAC6-215ENST00000465457 TFPTP0C1Z6 253 aa12.82□□□□□ -0.36
HDAC6-215ENST00000465457 THRBP10828 461 aa12.82□□□□□ -0.36
HDAC6-215ENST00000465457 CDH2P19022 906 aaPredicted RBP12.82□□□□□ -0.36
HDAC6-215ENST00000465457 FPR1P21462 350 aa12.82□□□□□ -0.36
HDAC6-215ENST00000465457 MYF6P23409 242 aa12.82□□□□□ -0.36
HDAC6-215ENST00000465457 RPS6KA3P51812 740 aa12.82□□□□□ -0.36
HDAC6-215ENST00000465457 CRISP3P54108 245 aa12.82□□□□□ -0.36
HDAC6-215ENST00000465457 RAD23AP54725 363 aa12.82□□□□□ -0.36
HDAC6-215ENST00000465457 RAB38P57729 211 aa12.82□□□□□ -0.36
HDAC6-215ENST00000465457 FAM53BQ14153 422 aa12.82□□□□□ -0.36
HDAC6-215ENST00000465457 SLC36A3Q495N2 470 aa12.82□□□□□ -0.36
HDAC6-215ENST00000465457 TMEM154Q6P9G4 183 aa12.82□□□□□ -0.36
HDAC6-215ENST00000465457 CDH24Q86UP0 819 aa12.82□□□□□ -0.36
HDAC6-215ENST00000465457 STK32CQ86UX6 486 aa12.82□□□□□ -0.36
HDAC6-215ENST00000465457 HORMAD2Q8N7B1 307 aa12.82□□□□□ -0.36
HDAC6-215ENST00000465457 C7orf57Q8NEG2 295 aa12.82□□□□□ -0.36
HDAC6-215ENST00000465457 TM9SF4Q92544 642 aa12.82□□□□□ -0.36
HDAC6-215ENST00000465457 ELP4Q96EB1 424 aa12.82□□□□□ -0.36
HDAC6-215ENST00000465457 TPD52L3Q96J77 140 aa12.82□□□□□ -0.36
HDAC6-215ENST00000465457 CNBD2Q96M20 576 aa12.82□□□□□ -0.36
HDAC6-215ENST00000465457 MS4A4EQ96PG1 132 aa12.82□□□□□ -0.36
HDAC6-215ENST00000465457 ZNF696Q9H7X3 374 aa12.82□□□□□ -0.36
HDAC6-215ENST00000465457 TRIM45Q9H8W5 580 aaPredicted RBP12.82□□□□□ -0.36
HDAC6-215ENST00000465457 C3orf18Q9UK00 162 aa12.82□□□□□ -0.36
HDAC6-215ENST00000465457 PTRH2Q9Y3E5 179 aaKnown RBP12.82□□□□□ -0.36
HDAC6-215ENST00000465457 PCDHGB3Q9Y5G1 929 aa12.82□□□□□ -0.36
HDAC6-215ENST00000465457 A0A1B0GUH1 482 aa12.81□□□□□ -0.36
HDAC6-215ENST00000465457 M0QX08 132 aa12.81□□□□□ -0.36
HDAC6-215ENST00000465457 HMGN4O00479 90 aa12.81□□□□□ -0.36
HDAC6-215ENST00000465457 GCM2O75603 506 aaPredicted RBP12.81□□□□□ -0.36
HDAC6-215ENST00000465457 C1QCP02747 245 aa12.81□□□□□ -0.36
HDAC6-215ENST00000465457 ATP1B1P05026 303 aa12.81□□□□□ -0.36
HDAC6-215ENST00000465457 CTSBP07858 339 aa12.81□□□□□ -0.36
HDAC6-215ENST00000465457 UBTFL6P0CB48 400 aaPredicted RBP12.81□□□□□ -0.36
HDAC6-215ENST00000465457 ETS2P15036 469 aa12.81□□□□□ -0.36
HDAC6-215ENST00000465457 PORP16435 677 aaPredicted RBP12.81□□□□□ -0.36
HDAC6-215ENST00000465457 MATN1P21941 496 aa12.81□□□□□ -0.36
HDAC6-215ENST00000465457 AQP1P29972 269 aa12.81□□□□□ -0.36
HDAC6-215ENST00000465457 TDGF1P3P51864 188 aa12.81□□□□□ -0.36
HDAC6-215ENST00000465457 CRYBA2P53672 197 aa12.81□□□□□ -0.36
HDAC6-215ENST00000465457 KCNJ10P78508 379 aa12.81□□□□□ -0.36
HDAC6-215ENST00000465457 PPP2R2BQ00005 443 aa12.81□□□□□ -0.36
HDAC6-215ENST00000465457 RUNX2Q13950 521 aa12.81□□□□□ -0.36
HDAC6-215ENST00000465457 ATAD3BQ5T9A4 648 aa12.81□□□□□ -0.36
HDAC6-215ENST00000465457 C1orf189Q5VU69 101 aa12.81□□□□□ -0.36
HDAC6-215ENST00000465457 TTC23Q5W5X9 447 aa12.81□□□□□ -0.36
HDAC6-215ENST00000465457 TNFAIP8L2Q6P589 184 aaPredicted RBP12.81□□□□□ -0.36
HDAC6-215ENST00000465457 SZRD1Q7Z422 152 aa12.81□□□□□ -0.36
HDAC6-215ENST00000465457 VTCN1Q7Z7D3 282 aa12.81□□□□□ -0.36
HDAC6-215ENST00000465457 MRGPRGQ86SM5 289 aa12.81□□□□□ -0.36
HDAC6-215ENST00000465457 CCDC116Q8IYX3 515 aa12.81□□□□□ -0.36
HDAC6-215ENST00000465457 CA13Q8N1Q1 262 aa12.81□□□□□ -0.36
HDAC6-215ENST00000465457 ARHGEF39Q8N4T4 335 aa12.81□□□□□ -0.36
HDAC6-215ENST00000465457 TTC29Q8NA56 475 aaPredicted RBP12.81□□□□□ -0.36
HDAC6-215ENST00000465457 SPPL2AQ8TCT8 520 aa12.81□□□□□ -0.36
HDAC6-215ENST00000465457 SLC38A5Q8WUX1 472 aa12.81□□□□□ -0.36
HDAC6-215ENST00000465457 RELTQ969Z4 430 aa12.81□□□□□ -0.36
HDAC6-215ENST00000465457 FKBP10Q96AY3 582 aa12.81□□□□□ -0.36
HDAC6-215ENST00000465457 TAMM41Q96BW9 452 aa12.81□□□□□ -0.36
HDAC6-215ENST00000465457 TMEM19Q96HH6 336 aa12.81□□□□□ -0.36
HDAC6-215ENST00000465457 C7orf34Q96L11 122 aa12.81□□□□□ -0.36
HDAC6-215ENST00000465457 FER1L6-AS2Q96M78 137 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms