RNA–Protein interactions for RNA: ENST00000465312.5

SCAMP3-204, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 715 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-204ENST00000465312 DCTN3O75935 186 aa16.96■□□□□ 0.31
SCAMP3-204ENST00000465312 SNX4O95219 450 aa16.96■□□□□ 0.31
SCAMP3-204ENST00000465312 AK1P00568 194 aa16.96■□□□□ 0.31
SCAMP3-204ENST00000465312 NPIPA8P0DM63 369 aa16.96■□□□□ 0.31
SCAMP3-204ENST00000465312 PPIBP23284 216 aaKnown RBP16.96■□□□□ 0.31
SCAMP3-204ENST00000465312 MAN2A2P49641 1150 aa16.96■□□□□ 0.31
SCAMP3-204ENST00000465312 DSTNP60981 165 aa16.96■□□□□ 0.31
SCAMP3-204ENST00000465312 PPIAP62937 165 aaKnown RBP16.96■□□□□ 0.31
SCAMP3-204ENST00000465312 GPR68Q15743 365 aa16.96■□□□□ 0.31
SCAMP3-204ENST00000465312 GRAMD1BQ3KR37 738 aa16.96■□□□□ 0.31
SCAMP3-204ENST00000465312 SLC30A6Q6NXT4 461 aa16.96■□□□□ 0.31
SCAMP3-204ENST00000465312 PIGWQ7Z7B1 504 aa16.96■□□□□ 0.31
SCAMP3-204ENST00000465312 SLC22A16Q86VW1 577 aa16.96■□□□□ 0.31
SCAMP3-204ENST00000465312 PCYOX1LQ8NBM8 494 aa16.96■□□□□ 0.31
SCAMP3-204ENST00000465312 DNAJB8Q8NHS0 232 aa16.96■□□□□ 0.31
SCAMP3-204ENST00000465312 MIPOL1Q8TD10 442 aa16.96■□□□□ 0.31
SCAMP3-204ENST00000465312 TTTY12Q9BZ98 90 aa16.96■□□□□ 0.31
SCAMP3-204ENST00000465312 SH2D2AQ9NP31 389 aa16.96■□□□□ 0.31
SCAMP3-204ENST00000465312 SLC52A3Q9NQ40 469 aa16.96■□□□□ 0.31
SCAMP3-204ENST00000465312 FBXO34Q9NWN3 711 aa16.96■□□□□ 0.31
SCAMP3-204ENST00000465312 FLRT3Q9NZU0 649 aa16.96■□□□□ 0.31
SCAMP3-204ENST00000465312 NPIPA1Q9UND3 350 aa16.96■□□□□ 0.31
SCAMP3-204ENST00000465312 NDUFAB1O14561 156 aa16.95■□□□□ 0.3
SCAMP3-204ENST00000465312 ASNA1O43681 348 aa16.95■□□□□ 0.3
SCAMP3-204ENST00000465312 SHOX2O60902 331 aaPredicted RBP16.95■□□□□ 0.3
SCAMP3-204ENST00000465312 NR2F1P10589 423 aa16.95■□□□□ 0.3
SCAMP3-204ENST00000465312 ETFAP13804 333 aa16.95■□□□□ 0.3
SCAMP3-204ENST00000465312 GDF1P27539 372 aa16.95■□□□□ 0.3
SCAMP3-204ENST00000465312 TXNL4AP83876 142 aaKnown RBP16.95■□□□□ 0.3
SCAMP3-204ENST00000465312 CAPRIN1Q14444 709 aaKnown RBP16.95■□□□□ 0.3
SCAMP3-204ENST00000465312 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.95■□□□□ 0.3
SCAMP3-204ENST00000465312 LRIF1Q5T3J3 769 aa16.95■□□□□ 0.3
SCAMP3-204ENST00000465312 RETREG3Q86VR2 466 aa16.95■□□□□ 0.3
SCAMP3-204ENST00000465312 GATSQ8NAP1 163 aa16.95■□□□□ 0.3
SCAMP3-204ENST00000465312 ZNF527Q8NB42 609 aa16.95■□□□□ 0.3
SCAMP3-204ENST00000465312 CCDC197Q8NCU1 140 aa16.95■□□□□ 0.3
SCAMP3-204ENST00000465312 OR52N2Q8NGI0 321 aa16.95■□□□□ 0.3
SCAMP3-204ENST00000465312 OR1J4Q8NGS1 313 aa16.95■□□□□ 0.3
SCAMP3-204ENST00000465312 FAR1Q8WVX9 515 aa16.95■□□□□ 0.3
SCAMP3-204ENST00000465312 PHF12Q96QT6 1004 aa16.95■□□□□ 0.3
SCAMP3-204ENST00000465312 THUMPD3Q9BV44 507 aaKnown RBP16.95■□□□□ 0.3
SCAMP3-204ENST00000465312 ANGPTL4Q9BY76 406 aa16.95■□□□□ 0.3
SCAMP3-204ENST00000465312 EXO5Q9H790 373 aa16.95■□□□□ 0.3
SCAMP3-204ENST00000465312 VAPAQ9P0L0 249 aa16.95■□□□□ 0.3
SCAMP3-204ENST00000465312 PPP4R1LQ9P1A2 415 aa16.95■□□□□ 0.3
SCAMP3-204ENST00000465312 P2RX2Q9UBL9 471 aa16.95■□□□□ 0.3
SCAMP3-204ENST00000465312 CORO2BQ9UQ03 480 aa16.95■□□□□ 0.3
SCAMP3-204ENST00000465312 WIF1Q9Y5W5 379 aa16.95■□□□□ 0.3
SCAMP3-204ENST00000465312 HMGN4O00479 90 aa16.94■□□□□ 0.3
SCAMP3-204ENST00000465312 GMFGO60234 142 aa16.94■□□□□ 0.3
SCAMP3-204ENST00000465312 STX11O75558 287 aa16.94■□□□□ 0.3
SCAMP3-204ENST00000465312 UNC5CO95185 931 aa16.94■□□□□ 0.3
SCAMP3-204ENST00000465312 COX4I1P13073 169 aa16.94■□□□□ 0.3
SCAMP3-204ENST00000465312 DCTP40126 519 aa16.94■□□□□ 0.3
SCAMP3-204ENST00000465312 RNF144AP50876 292 aaPredicted RBP16.94■□□□□ 0.3
SCAMP3-204ENST00000465312 SNTA1Q13424 505 aa16.94■□□□□ 0.3
SCAMP3-204ENST00000465312 ELOAQ14241 798 aaKnown RBP16.94■□□□□ 0.3
SCAMP3-204ENST00000465312 ARHGAP11BQ3KRB8 267 aa16.94■□□□□ 0.3
SCAMP3-204ENST00000465312 EXOSC6Q5RKV6 272 aaKnown RBP16.94■□□□□ 0.3
SCAMP3-204ENST00000465312 OLIG3Q7RTU3 272 aa16.94■□□□□ 0.3
SCAMP3-204ENST00000465312 ZAR1Q86SH2 424 aa16.94■□□□□ 0.3
SCAMP3-204ENST00000465312 MARCH3Q86UD3 253 aa16.94■□□□□ 0.3
SCAMP3-204ENST00000465312 ANKS4BQ8N8V4 417 aa16.94■□□□□ 0.3
SCAMP3-204ENST00000465312 ZFP62Q8NB50 900 aaPredicted RBP16.94■□□□□ 0.3
SCAMP3-204ENST00000465312 RP9Q8TA86 221 aaKnown RBP16.94■□□□□ 0.3
SCAMP3-204ENST00000465312 NR4A3Q92570 626 aa16.94■□□□□ 0.3
SCAMP3-204ENST00000465312 ROPN1LQ96C74 230 aa16.94■□□□□ 0.3
SCAMP3-204ENST00000465312 RCN3Q96D15 328 aa16.94■□□□□ 0.3
SCAMP3-204ENST00000465312 LRRC37BQ96QE4 947 aa16.94■□□□□ 0.3
SCAMP3-204ENST00000465312 SDF2Q99470 211 aa16.94■□□□□ 0.3
SCAMP3-204ENST00000465312 CCDC106Q9BWC9 280 aa16.94■□□□□ 0.3
SCAMP3-204ENST00000465312 CACYBPQ9HB71 228 aaKnown RBP16.94■□□□□ 0.3
SCAMP3-204ENST00000465312 ZFP64Q9NPA5 681 aa16.94■□□□□ 0.3
SCAMP3-204ENST00000465312 SDHAF3Q9NRP4 125 aa16.94■□□□□ 0.3
SCAMP3-204ENST00000465312 UBQLN4Q9NRR5 601 aa16.94■□□□□ 0.3
SCAMP3-204ENST00000465312 GID8Q9NWU2 228 aa16.94■□□□□ 0.3
SCAMP3-204ENST00000465312 SLC25A37Q9NYZ2 338 aa16.94■□□□□ 0.3
SCAMP3-204ENST00000465312 MKLN1Q9UL63 735 aa16.94■□□□□ 0.3
SCAMP3-204ENST00000465312 ABCG2Q9UNQ0 655 aa16.94■□□□□ 0.3
SCAMP3-204ENST00000465312 WDR45Q9Y484 360 aa16.94■□□□□ 0.3
SCAMP3-204ENST00000465312 ANKRD33BA6NCL7 494 aa16.93■□□□□ 0.3
SCAMP3-204ENST00000465312 FBP2O00757 339 aa16.93■□□□□ 0.3
SCAMP3-204ENST00000465312 AIM2O14862 343 aa16.93■□□□□ 0.3
SCAMP3-204ENST00000465312 NDUFB5O43674 189 aa16.93■□□□□ 0.3
SCAMP3-204ENST00000465312 TRAPPC6AO75865 159 aa16.93■□□□□ 0.3
SCAMP3-204ENST00000465312 OXSR1O95747 527 aaPredicted RBP16.93■□□□□ 0.3
SCAMP3-204ENST00000465312 BCHEP06276 602 aa16.93■□□□□ 0.3
SCAMP3-204ENST00000465312 PTPN6P29350 595 aa16.93■□□□□ 0.3
SCAMP3-204ENST00000465312 RGNQ15493 299 aa16.93■□□□□ 0.3
SCAMP3-204ENST00000465312 SYPL1Q16563 259 aa16.93■□□□□ 0.3
SCAMP3-204ENST00000465312 TRMT5Q32P41 509 aaKnown RBP16.93■□□□□ 0.3
SCAMP3-204ENST00000465312 OR5M10Q6IEU7 315 aa16.93■□□□□ 0.3
SCAMP3-204ENST00000465312 ATCAYQ86WG3 371 aa16.93■□□□□ 0.3
SCAMP3-204ENST00000465312 DPP10Q8N608 796 aa16.93■□□□□ 0.3
SCAMP3-204ENST00000465312 OR4K17Q8NGC6 315 aa16.93■□□□□ 0.3
SCAMP3-204ENST00000465312 FAM110BQ8TC76 370 aa16.93■□□□□ 0.3
SCAMP3-204ENST00000465312 BCAS4Q8TDM0 211 aa16.93■□□□□ 0.3
SCAMP3-204ENST00000465312 CMTM5Q96DZ9 223 aa16.93■□□□□ 0.3
SCAMP3-204ENST00000465312 CGREF1Q99674 301 aa16.93■□□□□ 0.3
SCAMP3-204ENST00000465312 HOXD1Q9GZZ0 328 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms