RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 OR52N2Q8NGI0 321 aa16.04■□□□□ 0.16
CPSF4-209ENST00000465132 HOXB13Q92826 284 aaPredicted RBP16.04■□□□□ 0.16
CPSF4-209ENST00000465132 PMM1Q92871 262 aa16.04■□□□□ 0.16
CPSF4-209ENST00000465132 TMEM125Q96AQ2 219 aa16.04■□□□□ 0.16
CPSF4-209ENST00000465132 RCN3Q96D15 328 aa16.04■□□□□ 0.16
CPSF4-209ENST00000465132 GIMAP5Q96F15 307 aa16.04■□□□□ 0.16
CPSF4-209ENST00000465132 ANKRD27Q96NW4 1050 aa16.04■□□□□ 0.16
CPSF4-209ENST00000465132 SIGLEC12Q96PQ1 595 aa16.04■□□□□ 0.16
CPSF4-209ENST00000465132 NPAS2Q99743 824 aa16.04■□□□□ 0.16
CPSF4-209ENST00000465132 THUMPD3Q9BV44 507 aaKnown RBP16.04■□□□□ 0.16
CPSF4-209ENST00000465132 SPATA9Q9BWV2 254 aa16.04■□□□□ 0.16
CPSF4-209ENST00000465132 BTBD2Q9BX70 525 aa16.04■□□□□ 0.16
CPSF4-209ENST00000465132 HPF1Q9NWY4 346 aa16.04■□□□□ 0.16
CPSF4-209ENST00000465132 CALML5Q9NZT1 146 aa16.04■□□□□ 0.16
CPSF4-209ENST00000465132 CBLCQ9ULV8 474 aa16.04■□□□□ 0.16
CPSF4-209ENST00000465132 ERVK-11Q9UQG0 969 aa16.04■□□□□ 0.16
CPSF4-209ENST00000465132 NPFFR2Q9Y5X5 522 aa16.04■□□□□ 0.16
CPSF4-209ENST00000465132 FBP2O00757 339 aa16.03■□□□□ 0.16
CPSF4-209ENST00000465132 AIM2O14862 343 aa16.03■□□□□ 0.16
CPSF4-209ENST00000465132 ATP5HO75947 161 aa16.03■□□□□ 0.16
CPSF4-209ENST00000465132 COX6B1P14854 86 aa16.03■□□□□ 0.16
CPSF4-209ENST00000465132 ATP6V1C1P21283 382 aa16.03■□□□□ 0.16
CPSF4-209ENST00000465132 SOX18P35713 384 aa16.03■□□□□ 0.16
CPSF4-209ENST00000465132 CD96P40200 585 aa16.03■□□□□ 0.16
CPSF4-209ENST00000465132 CLK3P49761 638 aaKnown RBP16.03■□□□□ 0.16
CPSF4-209ENST00000465132 NUDT2P50583 147 aa16.03■□□□□ 0.16
CPSF4-209ENST00000465132 RASSF2P50749 326 aa16.03■□□□□ 0.16
CPSF4-209ENST00000465132 PNLIPRP2P54317 469 aa16.03■□□□□ 0.16
CPSF4-209ENST00000465132 POU6F2P78424 691 aaPredicted RBP16.03■□□□□ 0.16
CPSF4-209ENST00000465132 ADORA2A-AS1P86434 159 aa16.03■□□□□ 0.16
CPSF4-209ENST00000465132 OC90Q02509 493 aaPredicted RBP16.03■□□□□ 0.16
CPSF4-209ENST00000465132 GAB1Q13480 694 aa16.03■□□□□ 0.16
CPSF4-209ENST00000465132 OR1C1Q15619 314 aa16.03■□□□□ 0.16
CPSF4-209ENST00000465132 XKRXQ6PP77 449 aa16.03■□□□□ 0.16
CPSF4-209ENST00000465132 C16orf89Q6UX73 402 aa16.03■□□□□ 0.16
CPSF4-209ENST00000465132 DLEU7Q6UYE1 221 aa16.03■□□□□ 0.16
CPSF4-209ENST00000465132 NUP54Q7Z3B4 507 aa16.03■□□□□ 0.16
CPSF4-209ENST00000465132 C16orf62Q7Z3J2 963 aa16.03■□□□□ 0.16
CPSF4-209ENST00000465132 RNF130Q86XS8 419 aa16.03■□□□□ 0.16
CPSF4-209ENST00000465132 TREML1Q86YW5 311 aa16.03■□□□□ 0.16
CPSF4-209ENST00000465132 POU5F2Q8N7G0 328 aa16.03■□□□□ 0.16
CPSF4-209ENST00000465132 TMCO6Q96DC7 493 aa16.03■□□□□ 0.16
CPSF4-209ENST00000465132 DTNBP1Q96EV8 351 aa16.03■□□□□ 0.16
CPSF4-209ENST00000465132 SCMH1Q96GD3 660 aa16.03■□□□□ 0.16
CPSF4-209ENST00000465132 GPR137Q96N19 417 aa16.03■□□□□ 0.16
CPSF4-209ENST00000465132 RASL10BQ96S79 203 aa16.03■□□□□ 0.16
CPSF4-209ENST00000465132 SECISBP2Q96T21 854 aaKnown RBP16.03■□□□□ 0.16
CPSF4-209ENST00000465132 HES7Q9BYE0 225 aa16.03■□□□□ 0.16
CPSF4-209ENST00000465132 NXF5Q9H1B4 397 aaKnown RBP16.03■□□□□ 0.16
CPSF4-209ENST00000465132 CACYBPQ9HB71 228 aaKnown RBP16.03■□□□□ 0.16
CPSF4-209ENST00000465132 KLHL1Q9NR64 748 aa16.03■□□□□ 0.16
CPSF4-209ENST00000465132 POLE3Q9NRF9 147 aa16.03■□□□□ 0.16
CPSF4-209ENST00000465132 ANKRD10Q9NXR5 420 aa16.03■□□□□ 0.16
CPSF4-209ENST00000465132 TINAGQ9UJW2 476 aa16.03■□□□□ 0.16
CPSF4-209ENST00000465132 ZNF835Q9Y2P0 537 aa16.03■□□□□ 0.16
CPSF4-209ENST00000465132 L3MBTL1Q9Y468 752 aa16.03■□□□□ 0.16
CPSF4-209ENST00000465132 TEP1Q99973 2627 aaKnown RBP16.02■□□□□ 0.16
CPSF4-209ENST00000465132 CCT8L1PA6NM43 557 aa16.02■□□□□ 0.16
CPSF4-209ENST00000465132 MAN1A2O60476 641 aa16.02■□□□□ 0.16
CPSF4-209ENST00000465132 REM1O75628 298 aa16.02■□□□□ 0.16
CPSF4-209ENST00000465132 CT45A8P0DMV1 189 aa16.02■□□□□ 0.16
CPSF4-209ENST00000465132 CT45A9P0DMV2 189 aa16.02■□□□□ 0.16
CPSF4-209ENST00000465132 AGAP20933 346 aa16.02■□□□□ 0.16
CPSF4-209ENST00000465132 PTPN6P29350 595 aa16.02■□□□□ 0.16
CPSF4-209ENST00000465132 PIGAP37287 484 aa16.02■□□□□ 0.16
CPSF4-209ENST00000465132 ST13P50502 369 aaKnown RBP16.02■□□□□ 0.16
CPSF4-209ENST00000465132 PSG6Q00889 435 aa16.02■□□□□ 0.16
CPSF4-209ENST00000465132 DUSP8Q13202 625 aa16.02■□□□□ 0.16
CPSF4-209ENST00000465132 KRTCAP3Q53RY4 240 aa16.02■□□□□ 0.16
CPSF4-209ENST00000465132 RUNDC3AQ59EK9 446 aa16.02■□□□□ 0.16
CPSF4-209ENST00000465132 CT45A2Q5DJT8 189 aa16.02■□□□□ 0.16
CPSF4-209ENST00000465132 SPINK14Q6IE38 97 aa16.02■□□□□ 0.16
CPSF4-209ENST00000465132 RTL4Q6ZR62 310 aa16.02■□□□□ 0.16
CPSF4-209ENST00000465132 RETREG3Q86VR2 466 aa16.02■□□□□ 0.16
CPSF4-209ENST00000465132 SLC30A8Q8IWU4 369 aa16.02■□□□□ 0.16
CPSF4-209ENST00000465132 GOLM1Q8NBJ4 401 aa16.02■□□□□ 0.16
CPSF4-209ENST00000465132 OIT3Q8WWZ8 545 aa16.02■□□□□ 0.16
CPSF4-209ENST00000465132 SPACA9Q96E40 222 aaPredicted RBP16.02■□□□□ 0.16
CPSF4-209ENST00000465132 OR7D2Q96RA2 312 aa16.02■□□□□ 0.16
CPSF4-209ENST00000465132 ECSITQ9BQ95 431 aa16.02■□□□□ 0.16
CPSF4-209ENST00000465132 HOXD1Q9GZZ0 328 aa16.02■□□□□ 0.16
CPSF4-209ENST00000465132 OR51I1Q9H343 314 aa16.02■□□□□ 0.16
CPSF4-209ENST00000465132 ANKRA2Q9H9E1 313 aa16.02■□□□□ 0.16
CPSF4-209ENST00000465132 IL1RL2Q9HB29 575 aa16.02■□□□□ 0.16
CPSF4-209ENST00000465132 TIMMDC1Q9NPL8 285 aa16.02■□□□□ 0.16
CPSF4-209ENST00000465132 VAPAQ9P0L0 249 aa16.02■□□□□ 0.16
CPSF4-209ENST00000465132 P2RX2Q9UBL9 471 aa16.02■□□□□ 0.16
CPSF4-209ENST00000465132 FBN2P35556 2912 aa16.01■□□□□ 0.15
CPSF4-209ENST00000465132 OTOGQ6ZRI0 2925 aa16.01■□□□□ 0.15
CPSF4-209ENST00000465132 TRBV5-3A0A0A0MS03 114 aa16.01■□□□□ 0.15
CPSF4-209ENST00000465132 OR6C70A6NIJ9 312 aa16.01■□□□□ 0.15
CPSF4-209ENST00000465132 PRKNO60260 465 aaPredicted RBP16.01■□□□□ 0.15
CPSF4-209ENST00000465132 DNAJA2O60884 412 aa16.01■□□□□ 0.15
CPSF4-209ENST00000465132 PPM1BO75688 479 aa16.01■□□□□ 0.15
CPSF4-209ENST00000465132 GUSBP08236 651 aa16.01■□□□□ 0.15
CPSF4-209ENST00000465132 FBXO45P0C2W1 286 aa16.01■□□□□ 0.15
CPSF4-209ENST00000465132 CD46P15529 392 aa16.01■□□□□ 0.15
CPSF4-209ENST00000465132 GPX2P18283 190 aa16.01■□□□□ 0.15
CPSF4-209ENST00000465132 ENDOUP21128 410 aaKnown RBP16.01■□□□□ 0.15
CPSF4-209ENST00000465132 ABCD3P28288 659 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms