RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 FOPNLQ96NB1 174 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 TGM7Q96PF1 710 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 HIST1H2AAQ96QV6 131 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 OR52B2Q96RD2 323 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 SIGLEC11Q96RL6 698 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 ZNF382Q96SR6 550 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 SLX1AQ9BQ83 275 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 H2AFJQ9BTM1 129 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 CAPS2Q9BXY5 557 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 NUF2Q9BZD4 464 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 FAM107BQ9H098 131 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 KLHL31Q9H511 634 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 WDR55Q9H6Y2 383 aaPredicted RBP3.36□□□□□ -1.87
SCFD1-204ENST00000463622 HRASLS2Q9NWW9 162 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 HAO1Q9UJM8 370 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 POMT2Q9UKY4 750 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 RARRES3Q9UL19 164 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 ANKRD12Q6UB98 2062 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 A0A0J9YVX5 310 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 OR2A25A4D2G3 310 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 TMEM114B3SHH9 223 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 C9JVG2 144 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 H3BMH7 237 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 SAP18O00422 153 aaKnown RBP3.36□□□□□ -1.87
SCFD1-204ENST00000463622 RTCAO00442 366 aaKnown RBP3.36□□□□□ -1.87
SCFD1-204ENST00000463622 MANBAO00462 879 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 KLF11O14901 512 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 TMPRSS11DO60235 418 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 PRAMEF2O60811 474 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 KLF7O75840 302 aaPredicted RBP3.36□□□□□ -1.87
SCFD1-204ENST00000463622 HSPA4LO95757 839 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 PDYNP01213 254 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 S100BP04271 92 aaPredicted RBP3.36□□□□□ -1.87
SCFD1-204ENST00000463622 LINC00032P0C843 101 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 C1GALT1C1LP0DN25 315 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 COX6B1P14854 86 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 NDUFS1P28331 727 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 RORAP35398 523 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 TSFMP43897 325 aaKnown RBP3.36□□□□□ -1.87
SCFD1-204ENST00000463622 HNMTP50135 292 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 EFNA3P52797 238 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 LINC00205P59089 165 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 IRF8Q02556 426 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 ACY1Q03154 408 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 PRDX1Q06830 199 aaKnown RBP3.36□□□□□ -1.87
SCFD1-204ENST00000463622 ILF2Q12905 390 aaKnown RBP3.36□□□□□ -1.87
SCFD1-204ENST00000463622 DDX39BQ13838 428 aaKnown RBP3.36□□□□□ -1.87
SCFD1-204ENST00000463622 HKDC1Q2TB90 917 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 XKR7Q5GH72 579 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 XKR6Q5GH73 641 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 CDKL4Q5MAI5 379 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 C10orf25Q5T742 122 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 PLAG1Q6DJT9 500 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 CAPN13Q6MZZ7 669 aaPredicted RBP3.36□□□□□ -1.87
SCFD1-204ENST00000463622 PPP4R4Q6NUP7 873 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 XKRXQ6PP77 449 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 FIGLAQ6QHK4 219 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 SPESP1Q6UW49 350 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 Q6ZSR9 355 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 GPRIN3Q6ZVF9 776 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 KRT73Q86Y46 540 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 KMT5CQ86Y97 462 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 MYLK4Q86YV6 388 aaPredicted RBP3.36□□□□□ -1.87
SCFD1-204ENST00000463622 LIX1LQ8IVB5 337 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 SLC22A9Q8IVM8 553 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 ZADH2Q8N4Q0 377 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 L3MBTL4Q8NA19 623 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 OR7G3Q8NG95 312 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 OR4K1Q8NGD4 311 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 OR8K5Q8NH50 307 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 LRRC8CQ8TDW0 803 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 GRHL3Q8TE85 626 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 CREB3L4Q8TEY5 395 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 TWIST2Q8WVJ9 160 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 DYDC1Q8WWB3 177 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 MR1Q95460 341 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 WDR34Q96EX3 536 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 ZDHHC12Q96GR4 267 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 APIPQ96GX9 242 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 C7orf26Q96N11 449 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 TREX2Q9BQ50 279 aaPredicted RBP3.36□□□□□ -1.87
SCFD1-204ENST00000463622 DPH7Q9BTV6 452 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 NTMT1Q9BV86 223 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 ZNF717Q9BY31 904 aaPredicted RBP3.36□□□□□ -1.87
SCFD1-204ENST00000463622 ACPTQ9BZG2 426 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 STN1Q9H668 368 aaKnown RBP3.36□□□□□ -1.87
SCFD1-204ENST00000463622 ZBTB20Q9HC78 741 aaPredicted RBP3.36□□□□□ -1.87
SCFD1-204ENST00000463622 FGF21Q9NSA1 209 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 OR6C2Q9NZP2 312 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 NKX1-2Q9UD57 310 aaPredicted RBP3.36□□□□□ -1.87
SCFD1-204ENST00000463622 POLG2Q9UHN1 485 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 RAP2CQ9Y3L5 183 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 PCDHGB6Q9Y5F9 930 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 HEBP2Q9Y5Z4 205 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 COLEC10Q9Y6Z7 277 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 CROCCQ5TZA2 2017 aa3.35□□□□□ -1.87
SCFD1-204ENST00000463622 A0A0J9YY10 115 aa3.35□□□□□ -1.87
SCFD1-204ENST00000463622 WASHC1A8K0Z3 465 aa3.35□□□□□ -1.87
SCFD1-204ENST00000463622 VSTM5A8MXK1 200 aa3.35□□□□□ -1.87
SCFD1-204ENST00000463622 MAGEB17A8MXT2 336 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms