RNA–Protein interactions for RNA: ENST00000463007.5

HDAC4-208, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-208ENST00000463007 ORAI1Q96D31 301 aa11.65□□□□□ -0.54
HDAC4-208ENST00000463007 TMEM43Q9BTV4 400 aa11.65□□□□□ -0.54
HDAC4-208ENST00000463007 EFCAB11Q9BUY7 163 aa11.65□□□□□ -0.54
HDAC4-208ENST00000463007 GPR55Q9Y2T6 319 aaPredicted RBP11.65□□□□□ -0.54
HDAC4-208ENST00000463007 AP1M2Q9Y6Q5 423 aa11.65□□□□□ -0.54
HDAC4-208ENST00000463007 F5P12259 2224 aa11.65□□□□□ -0.54
HDAC4-208ENST00000463007 KIAA0100Q14667 2235 aaKnown RBP11.65□□□□□ -0.54
HDAC4-208ENST00000463007 EYSQ5T1H1 3165 aa11.65□□□□□ -0.54
HDAC4-208ENST00000463007 SSNA1O43805 119 aa11.65□□□□□ -0.54
HDAC4-208ENST00000463007 PIP5K1CO60331 668 aa11.65□□□□□ -0.54
HDAC4-208ENST00000463007 MMP20O60882 483 aa11.65□□□□□ -0.54
HDAC4-208ENST00000463007 TP53P04637 393 aaPredicted RBP11.65□□□□□ -0.54
HDAC4-208ENST00000463007 GYPBP06028 91 aa11.65□□□□□ -0.54
HDAC4-208ENST00000463007 GIFP27352 417 aa11.65□□□□□ -0.54
HDAC4-208ENST00000463007 TRIM23P36406 574 aa11.65□□□□□ -0.54
HDAC4-208ENST00000463007 ZMYND11Q15326 602 aa11.65□□□□□ -0.54
HDAC4-208ENST00000463007 HNRNPA1L2Q32P51 320 aaKnown RBP11.65□□□□□ -0.54
HDAC4-208ENST00000463007 PRSS45Q7RTY3 260 aa11.65□□□□□ -0.54
HDAC4-208ENST00000463007 SLC9B2Q86UD5 537 aa11.65□□□□□ -0.54
HDAC4-208ENST00000463007 NR2C2APQ86WQ0 139 aa11.65□□□□□ -0.54
HDAC4-208ENST00000463007 CPOQ8IVL8 374 aa11.65□□□□□ -0.54
HDAC4-208ENST00000463007 BMPERQ8N8U9 685 aa11.65□□□□□ -0.54
HDAC4-208ENST00000463007 OR13C5Q8NGS8 318 aa11.65□□□□□ -0.54
HDAC4-208ENST00000463007 CXorf40BQ96DE9 158 aa11.65□□□□□ -0.54
HDAC4-208ENST00000463007 MS4A3Q96HJ5 214 aa11.65□□□□□ -0.54
HDAC4-208ENST00000463007 SLC35G5Q96KT7 338 aa11.65□□□□□ -0.54
HDAC4-208ENST00000463007 THAP7Q9BT49 309 aaPredicted RBP11.65□□□□□ -0.54
HDAC4-208ENST00000463007 PPP1R3EQ9H7J1 279 aa11.65□□□□□ -0.54
HDAC4-208ENST00000463007 MYNNQ9NPC7 610 aa11.65□□□□□ -0.54
HDAC4-208ENST00000463007 IMP3Q9NV31 184 aaKnown RBP11.65□□□□□ -0.54
HDAC4-208ENST00000463007 WSB2Q9NYS7 404 aaPredicted RBP11.65□□□□□ -0.54
HDAC4-208ENST00000463007 C17orf113A0A1B0GUU1 675 aa11.65□□□□□ -0.55
HDAC4-208ENST00000463007 TBX6O95947 436 aaPredicted RBP11.65□□□□□ -0.55
HDAC4-208ENST00000463007 ERGP11308 486 aa11.65□□□□□ -0.55
HDAC4-208ENST00000463007 SSR2P43308 183 aa11.65□□□□□ -0.55
HDAC4-208ENST00000463007 PNLIPRP1P54315 467 aa11.65□□□□□ -0.55
HDAC4-208ENST00000463007 ZNF697Q5TEC3 545 aa11.65□□□□□ -0.55
HDAC4-208ENST00000463007 PLBD1Q6P4A8 553 aa11.65□□□□□ -0.55
HDAC4-208ENST00000463007 TMEM107Q6UX40 140 aa11.65□□□□□ -0.55
HDAC4-208ENST00000463007 DGLUCYQ7Z3D6 616 aa11.65□□□□□ -0.55
HDAC4-208ENST00000463007 NKAIN4Q8IVV8 208 aa11.65□□□□□ -0.55
HDAC4-208ENST00000463007 IQCF2Q8IXL9 164 aa11.65□□□□□ -0.55
HDAC4-208ENST00000463007 ANKRD53Q8N9V6 530 aa11.65□□□□□ -0.55
HDAC4-208ENST00000463007 OR11H4Q8NGC9 324 aa11.65□□□□□ -0.55
HDAC4-208ENST00000463007 SLC38A2Q96QD8 506 aa11.65□□□□□ -0.55
HDAC4-208ENST00000463007 RASD1Q9Y272 281 aa11.65□□□□□ -0.55
HDAC4-208ENST00000463007 SNRNP200O75643 2136 aaKnown RBP11.64□□□□□ -0.55
HDAC4-208ENST00000463007 POM121CA8CG34 1229 aa11.64□□□□□ -0.55
HDAC4-208ENST00000463007 EIF4EP06730 217 aaKnown RBP11.64□□□□□ -0.55
HDAC4-208ENST00000463007 ACP2P11117 423 aa11.64□□□□□ -0.55
HDAC4-208ENST00000463007 HOXB3P14651 431 aaPredicted RBP11.64□□□□□ -0.55
HDAC4-208ENST00000463007 TBXA2RP21731 343 aa11.64□□□□□ -0.55
HDAC4-208ENST00000463007 KELP23276 732 aa11.64□□□□□ -0.55
HDAC4-208ENST00000463007 NTRK2Q16620 822 aa11.64□□□□□ -0.55
HDAC4-208ENST00000463007 TMEM52BQ4KMG9 183 aa11.64□□□□□ -0.55
HDAC4-208ENST00000463007 SLC36A4Q6YBV0 504 aa11.64□□□□□ -0.55
HDAC4-208ENST00000463007 NRMQ8IXM6 262 aa11.64□□□□□ -0.55
HDAC4-208ENST00000463007 GPR135Q8IZ08 494 aa11.64□□□□□ -0.55
HDAC4-208ENST00000463007 ZNF655Q8N720 491 aaPredicted RBP11.64□□□□□ -0.55
HDAC4-208ENST00000463007 CYB561A3Q8NBI2 242 aa11.64□□□□□ -0.55
HDAC4-208ENST00000463007 HERVK_113Q902F9 699 aa11.64□□□□□ -0.55
HDAC4-208ENST00000463007 TM4SF18Q96CE8 201 aa11.64□□□□□ -0.55
HDAC4-208ENST00000463007 COX14Q96I36 57 aa11.64□□□□□ -0.55
HDAC4-208ENST00000463007 SPRTNQ9H040 489 aaPredicted RBP11.64□□□□□ -0.55
HDAC4-208ENST00000463007 RNF32Q9H0A6 362 aa11.64□□□□□ -0.55
HDAC4-208ENST00000463007 FZD3Q9NPG1 666 aa11.64□□□□□ -0.55
HDAC4-208ENST00000463007 KCND3Q9UK17 655 aa11.64□□□□□ -0.55
HDAC4-208ENST00000463007 PRODHO43272 600 aa11.64□□□□□ -0.55
HDAC4-208ENST00000463007 SERPINI2O75830 405 aa11.64□□□□□ -0.55
HDAC4-208ENST00000463007 PRNPP04156 253 aa11.64□□□□□ -0.55
HDAC4-208ENST00000463007 HMGN2P05204 90 aaKnown RBP11.64□□□□□ -0.55
HDAC4-208ENST00000463007 TFPIP10646 304 aa11.64□□□□□ -0.55
HDAC4-208ENST00000463007 ADAM15Q13444 863 aa11.64□□□□□ -0.55
HDAC4-208ENST00000463007 SFRP4Q6FHJ7 346 aaPredicted RBP11.64□□□□□ -0.55
HDAC4-208ENST00000463007 QSOX2Q6ZRP7 698 aa11.64□□□□□ -0.55
HDAC4-208ENST00000463007 FAM83HQ6ZRV2 1179 aaPredicted RBP11.64□□□□□ -0.55
HDAC4-208ENST00000463007 ERN2Q76MJ5 926 aaKnown RBP11.64□□□□□ -0.55
HDAC4-208ENST00000463007 GET4Q7L5D6 327 aaPredicted RBP11.64□□□□□ -0.55
HDAC4-208ENST00000463007 C17orf64Q86WR6 236 aa11.64□□□□□ -0.55
HDAC4-208ENST00000463007 PLCZ1Q86YW0 608 aa11.64□□□□□ -0.55
HDAC4-208ENST00000463007 FAM26EQ8N5C1 309 aa11.64□□□□□ -0.55
HDAC4-208ENST00000463007 OR51L1Q8NGJ5 315 aa11.64□□□□□ -0.55
HDAC4-208ENST00000463007 CHFRQ96EP1 664 aa11.64□□□□□ -0.55
HDAC4-208ENST00000463007 MENTQ9BUN1 341 aa11.64□□□□□ -0.55
HDAC4-208ENST00000463007 POLDIP3Q9BY77 421 aaKnown RBP11.64□□□□□ -0.55
HDAC4-208ENST00000463007 OR52A5Q9H2C5 316 aa11.64□□□□□ -0.55
HDAC4-208ENST00000463007 TESQ9UGI8 421 aaKnown RBP11.64□□□□□ -0.55
HDAC4-208ENST00000463007 ING4Q9UNL4 249 aa11.64□□□□□ -0.55
HDAC4-208ENST00000463007 CHST2Q9Y4C5 530 aa11.64□□□□□ -0.55
HDAC4-208ENST00000463007 SIRT4Q9Y6E7 314 aaPredicted RBP11.64□□□□□ -0.55
HDAC4-208ENST00000463007 GATBO75879 557 aaKnown RBP11.63□□□□□ -0.55
HDAC4-208ENST00000463007 MT-ND4P03905 459 aa11.63□□□□□ -0.55
HDAC4-208ENST00000463007 CHRM4P08173 479 aa11.63□□□□□ -0.55
HDAC4-208ENST00000463007 C6P13671 934 aa11.63□□□□□ -0.55
HDAC4-208ENST00000463007 ACP5P13686 325 aa11.63□□□□□ -0.55
HDAC4-208ENST00000463007 ADRB3P13945 408 aa11.63□□□□□ -0.55
HDAC4-208ENST00000463007 DDCP20711 480 aa11.63□□□□□ -0.55
HDAC4-208ENST00000463007 HLA-DMAP28067 261 aa11.63□□□□□ -0.55
HDAC4-208ENST00000463007 TCTE3Q8IZS6 198 aa11.63□□□□□ -0.55
HDAC4-208ENST00000463007 UXS1Q8NBZ7 420 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms