RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 SPPL3Q8TCT6 385 aa13.23□□□□□ -0.29
SCFD1-203ENST00000458591 WFIKKN2Q8TEU8 576 aa13.23□□□□□ -0.29
SCFD1-203ENST00000458591 WACQ9BTA9 647 aa13.23□□□□□ -0.29
SCFD1-203ENST00000458591 HCAR1Q9BXC0 346 aa13.23□□□□□ -0.29
SCFD1-203ENST00000458591 CFHR5Q9BXR6 569 aa13.23□□□□□ -0.29
SCFD1-203ENST00000458591 GON7Q9BXV9 100 aa13.23□□□□□ -0.29
SCFD1-203ENST00000458591 HINT3Q9NQE9 182 aaKnown RBP13.23□□□□□ -0.29
SCFD1-203ENST00000458591 CES1P1Q9UKY3 287 aa13.23□□□□□ -0.29
SCFD1-203ENST00000458591 SCN3AQ9NY46 2000 aa13.23□□□□□ -0.29
SCFD1-203ENST00000458591 A0A0G2JPF8 293 aa13.22□□□□□ -0.29
SCFD1-203ENST00000458591 HNRNPCL2B2RXH8 293 aa13.22□□□□□ -0.29
SCFD1-203ENST00000458591 HNRNPCL3B7ZW38 293 aa13.22□□□□□ -0.29
SCFD1-203ENST00000458591 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.22□□□□□ -0.29
SCFD1-203ENST00000458591 SLC9A3R1O14745 358 aaPredicted RBP13.22□□□□□ -0.29
SCFD1-203ENST00000458591 PLOD3O60568 738 aa13.22□□□□□ -0.29
SCFD1-203ENST00000458591 CLEC3AO75596 197 aa13.22□□□□□ -0.29
SCFD1-203ENST00000458591 TIMP1P01033 207 aa13.22□□□□□ -0.29
SCFD1-203ENST00000458591 HNRNPCL4P0DMR1 293 aa13.22□□□□□ -0.29
SCFD1-203ENST00000458591 DRD2P14416 443 aa13.22□□□□□ -0.29
SCFD1-203ENST00000458591 TRAM2Q15035 370 aa13.22□□□□□ -0.29
SCFD1-203ENST00000458591 ZIC1Q15915 447 aa13.22□□□□□ -0.29
SCFD1-203ENST00000458591 EOGTQ5NDL2 527 aa13.22□□□□□ -0.29
SCFD1-203ENST00000458591 TRIQKQ629K1 86 aa13.22□□□□□ -0.29
SCFD1-203ENST00000458591 SMARCD3Q6STE5 483 aa13.22□□□□□ -0.29
SCFD1-203ENST00000458591 ADAMTSL4Q6UY14 1074 aa13.22□□□□□ -0.29
SCFD1-203ENST00000458591 GDF7Q7Z4P5 450 aa13.22□□□□□ -0.29
SCFD1-203ENST00000458591 NATD1Q8N6N6 113 aa13.22□□□□□ -0.29
SCFD1-203ENST00000458591 C19orf18Q8NEA5 215 aa13.22□□□□□ -0.29
SCFD1-203ENST00000458591 OR52E1Q8NGJ3 308 aa13.22□□□□□ -0.29
SCFD1-203ENST00000458591 SLC38A2Q96QD8 506 aa13.22□□□□□ -0.29
SCFD1-203ENST00000458591 ARHGDIGQ99819 225 aa13.22□□□□□ -0.29
SCFD1-203ENST00000458591 SOSTQ9BQB4 213 aa13.22□□□□□ -0.29
SCFD1-203ENST00000458591 MED18Q9BUE0 208 aa13.22□□□□□ -0.29
SCFD1-203ENST00000458591 C11orf49Q9H6J7 331 aa13.22□□□□□ -0.29
SCFD1-203ENST00000458591 TRIM45Q9H8W5 580 aaPredicted RBP13.22□□□□□ -0.29
SCFD1-203ENST00000458591 GALNT9Q9HCQ5 603 aa13.22□□□□□ -0.29
SCFD1-203ENST00000458591 MRPS30Q9NP92 439 aaKnown RBP13.22□□□□□ -0.29
SCFD1-203ENST00000458591 GIMAP4Q9NUV9 329 aa13.22□□□□□ -0.29
SCFD1-203ENST00000458591 CBLCQ9ULV8 474 aa13.22□□□□□ -0.29
SCFD1-203ENST00000458591 GSTK1Q9Y2Q3 226 aa13.22□□□□□ -0.29
SCFD1-203ENST00000458591 TRBV23OR9-2A0A075B6M9 112 aa13.22□□□□□ -0.29
SCFD1-203ENST00000458591 NPIPA5A0A0B4J1W7 369 aa13.22□□□□□ -0.29
SCFD1-203ENST00000458591 ISM1B1AKI9 464 aa13.22□□□□□ -0.29
SCFD1-203ENST00000458591 NPIPA7E9PJI5 369 aa13.22□□□□□ -0.29
SCFD1-203ENST00000458591 SEC14L5O43304 696 aa13.22□□□□□ -0.29
SCFD1-203ENST00000458591 ARHGEF9O43307 516 aa13.22□□□□□ -0.29
SCFD1-203ENST00000458591 TRIM3O75382 744 aaPredicted RBP13.22□□□□□ -0.29
SCFD1-203ENST00000458591 NPIPA8P0DM63 369 aa13.22□□□□□ -0.29
SCFD1-203ENST00000458591 PRG2P13727 222 aa13.22□□□□□ -0.29
SCFD1-203ENST00000458591 GSTM3P21266 225 aa13.22□□□□□ -0.29
SCFD1-203ENST00000458591 ALAS2P22557 587 aa13.22□□□□□ -0.29
SCFD1-203ENST00000458591 HLA-DMAP28067 261 aa13.22□□□□□ -0.29
SCFD1-203ENST00000458591 ERP29P30040 261 aaKnown RBP13.22□□□□□ -0.29
SCFD1-203ENST00000458591 TGM3Q08188 693 aa13.22□□□□□ -0.29
SCFD1-203ENST00000458591 KRT33BQ14525 404 aa13.22□□□□□ -0.29
SCFD1-203ENST00000458591 FAM78AQ5JUQ0 283 aa13.22□□□□□ -0.29
SCFD1-203ENST00000458591 KIAA1211LQ6NV74 962 aa13.22□□□□□ -0.29
SCFD1-203ENST00000458591 CD200R1LQ6Q8B3 271 aa13.22□□□□□ -0.29
SCFD1-203ENST00000458591 PLET1Q6UQ28 207 aa13.22□□□□□ -0.29
SCFD1-203ENST00000458591 RASSF6Q6ZTQ3 369 aa13.22□□□□□ -0.29
SCFD1-203ENST00000458591 MRGPREQ86SM8 312 aa13.22□□□□□ -0.29
SCFD1-203ENST00000458591 SUSD6Q92537 303 aa13.22□□□□□ -0.29
SCFD1-203ENST00000458591 ELP4Q96EB1 424 aa13.22□□□□□ -0.29
SCFD1-203ENST00000458591 MCHR1Q99705 422 aa13.22□□□□□ -0.29
SCFD1-203ENST00000458591 FAIM2Q9BWQ8 316 aa13.22□□□□□ -0.29
SCFD1-203ENST00000458591 ADAM29Q9UKF5 820 aa13.22□□□□□ -0.29
SCFD1-203ENST00000458591 EXOSC1Q9Y3B2 195 aaKnown RBP13.22□□□□□ -0.29
SCFD1-203ENST00000458591 PTPRSQ13332 1948 aa13.22□□□□□ -0.29
SCFD1-203ENST00000458591 A0A0G2JMP0 313 aa13.21□□□□□ -0.29
SCFD1-203ENST00000458591 A0A0X1KG70 313 aa13.21□□□□□ -0.29
SCFD1-203ENST00000458591 TRDV1A0A1B0GX56 115 aa13.21□□□□□ -0.29
SCFD1-203ENST00000458591 GTPBP1O00178 669 aaKnown RBP13.21□□□□□ -0.29
SCFD1-203ENST00000458591 ZGLP1P0C6A0 271 aa13.21□□□□□ -0.29
SCFD1-203ENST00000458591 GKN3PP0CG01 181 aa13.21□□□□□ -0.29
SCFD1-203ENST00000458591 FAM157BP0CG42 384 aa13.21□□□□□ -0.29
SCFD1-203ENST00000458591 TFPIP10646 304 aa13.21□□□□□ -0.29
SCFD1-203ENST00000458591 F3P13726 295 aa13.21□□□□□ -0.29
SCFD1-203ENST00000458591 ELK1P19419 428 aa13.21□□□□□ -0.29
SCFD1-203ENST00000458591 EVX1P49640 407 aa13.21□□□□□ -0.29
SCFD1-203ENST00000458591 BTN3A2P78410 334 aa13.21□□□□□ -0.29
SCFD1-203ENST00000458591 ID2Q02363 134 aa13.21□□□□□ -0.29
SCFD1-203ENST00000458591 IRF4Q15306 451 aa13.21□□□□□ -0.29
SCFD1-203ENST00000458591 PLBD1Q6P4A8 553 aa13.21□□□□□ -0.29
SCFD1-203ENST00000458591 ASB18Q6ZVZ8 466 aa13.21□□□□□ -0.29
SCFD1-203ENST00000458591 PLEKHM3Q6ZWE6 761 aa13.21□□□□□ -0.29
SCFD1-203ENST00000458591 TMEFF1Q8IYR6 380 aa13.21□□□□□ -0.29
SCFD1-203ENST00000458591 TCTE3Q8IZS6 198 aa13.21□□□□□ -0.29
SCFD1-203ENST00000458591 TMEM99Q8N816 258 aa13.21□□□□□ -0.29
SCFD1-203ENST00000458591 OR4M2Q8NGB6 313 aa13.21□□□□□ -0.29
SCFD1-203ENST00000458591 CDS1Q92903 461 aa13.21□□□□□ -0.29
SCFD1-203ENST00000458591 SPATA5L1Q9BVQ7 753 aa13.21□□□□□ -0.29
SCFD1-203ENST00000458591 ACOXLQ9NUZ1 547 aa13.21□□□□□ -0.29
SCFD1-203ENST00000458591 KLHL21Q9UJP4 597 aa13.21□□□□□ -0.29
SCFD1-203ENST00000458591 SLC13A4Q9UKG4 626 aa13.21□□□□□ -0.29
SCFD1-203ENST00000458591 SLC7A7Q9UM01 511 aa13.21□□□□□ -0.29
SCFD1-203ENST00000458591 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.21□□□□□ -0.29
SCFD1-203ENST00000458591 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.21□□□□□ -0.3
SCFD1-203ENST00000458591 E9PI62 339 aa13.21□□□□□ -0.3
SCFD1-203ENST00000458591 ERVH48-1M5A8F1 160 aa13.21□□□□□ -0.3
SCFD1-203ENST00000458591 CACNB4O00305 520 aaPredicted RBP13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms