RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 Q8N9P0 234 aaPredicted RBP3.31□□□□□ -1.88
RBM39-220ENST00000455343 OR10G3Q8NGC4 313 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 SLC22A8Q8TCC7 542 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 CD200R1Q8TD46 325 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 ABTB1Q969K4 478 aaPredicted RBP3.31□□□□□ -1.88
RBM39-220ENST00000455343 NEIL2Q969S2 332 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 ANKRD9Q96BM1 317 aaPredicted RBP3.31□□□□□ -1.88
RBM39-220ENST00000455343 PYCR2Q96C36 320 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 INTS12Q96CB8 462 aaKnown RBP3.31□□□□□ -1.88
RBM39-220ENST00000455343 MS4A6EQ96DS6 147 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 ZBED6CLQ96FA7 236 aaPredicted RBP3.31□□□□□ -1.88
RBM39-220ENST00000455343 SENP5Q96HI0 755 aaPredicted RBP3.31□□□□□ -1.88
RBM39-220ENST00000455343 TMEM41AQ96HV5 264 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 ART5Q96L15 291 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 ZNF597Q96LX8 424 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 QRFPRQ96P65 431 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 CSF3RQ99062 836 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 GPR21Q99679 349 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 TUBA1CQ9BQE3 449 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 MED18Q9BUE0 208 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 AMBRA1Q9C0C7 1298 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 OR8D2Q9GZM6 311 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 IL22Q9GZX6 179 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 SLCO5A1Q9H2Y9 848 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 RHBGQ9H310 441 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 ESRP2Q9H6T0 727 aaKnown RBP3.31□□□□□ -1.88
RBM39-220ENST00000455343 PARVBQ9HBI1 364 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 LRTM1Q9HBL6 345 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 ABHD10Q9NUJ1 306 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 INTS10Q9NVR2 710 aaKnown RBP3.31□□□□□ -1.88
RBM39-220ENST00000455343 MKS1Q9NXB0 559 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 ELOVL5Q9NYP7 299 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 CAMK2AQ9UQM7 478 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 ZNF148Q9UQR1 794 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 MRPS33Q9Y291 106 aaKnown RBP3.31□□□□□ -1.88
RBM39-220ENST00000455343 DTX4Q9Y2E6 619 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 C15orf41Q9Y2V0 281 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 TGP01266 2768 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 TRRAPQ9Y4A5 3859 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 USF3Q68DE3 2245 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 CHD3Q12873 2000 aaKnown RBP3.31□□□□□ -1.88
RBM39-220ENST00000455343 TENM1Q9UKZ4 2725 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 PRKDCP78527 4128 aaKnown RBP3.3□□□□□ -1.88
RBM39-220ENST00000455343 GOLGA6L9A6NEM1 432 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 CCDC154A6NI56 674 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 BTNL10A8MVZ5 291 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 C16orf97H3BN30 126 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 AP3B1O00203 1094 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 HS3ST1O14792 307 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 ERI3O43414 337 aaKnown RBP3.3□□□□□ -1.88
RBM39-220ENST00000455343 OR10H2O60403 315 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 LDB3O75112 727 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 TRAPPC6AO75865 159 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 TGM6O95932 706 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 PLAUP00749 431 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 IGHV4-39P01824 125 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 CLPSP04118 112 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 IFNA16P05015 189 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 SERPIND1P05546 499 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 C8GP07360 202 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 APRTP07741 180 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 SOD3P08294 240 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 CYP4B1P13584 511 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 ETS1P14921 441 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 DRD4P21917 467 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 GSTM2P28161 218 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 PTPN6P29350 595 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 HNRNPH1P31943 449 aaKnown RBP3.3□□□□□ -1.88
RBM39-220ENST00000455343 RPL22P35268 128 aaKnown RBP3.3□□□□□ -1.88
RBM39-220ENST00000455343 ACVR1BP36896 505 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 CASP3P42574 277 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 MAGEA1P43355 309 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 RPL21P46778 160 aaKnown RBP3.3□□□□□ -1.88
RBM39-220ENST00000455343 STT3AP46977 705 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 NPY2RP49146 381 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 LHX2P50458 406 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 MTTPP55157 894 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 AP1S2P56377 157 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 STXBP1P61764 594 aaKnown RBP3.3□□□□□ -1.88
RBM39-220ENST00000455343 RPS4XP62701 263 aaKnown RBP3.3□□□□□ -1.88
RBM39-220ENST00000455343 VLDLRP98155 873 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 LOXL1Q08397 574 aaPredicted RBP3.3□□□□□ -1.88
RBM39-220ENST00000455343 STX4Q12846 297 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 CSHL1Q14406 222 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 ACAP2Q15057 778 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 EBPQ15125 230 aaKnown RBP3.3□□□□□ -1.88
RBM39-220ENST00000455343 RPS6KA2Q15349 733 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 GUSBP1Q15486 140 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 SRSF7Q16629 238 aaKnown RBP eCLIP3.3□□□□□ -1.885e-7■□□□□ 10.8
RBM39-220ENST00000455343 TMEM249Q2WGJ8 235 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 BEX5Q5H9J7 111 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 TOR1AIP1Q5JTV8 583 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 TIGD3Q6B0B8 471 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 LRRC8EQ6NSJ5 796 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 UGT3A1Q6NUS8 523 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 SCIMPQ6UWF3 145 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 CES3Q6UWW8 571 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 PLXDC2Q6UX71 529 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 DGAT2L6Q6ZPD8 337 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 ZNF550Q7Z398 422 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms