RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 C3orf14Q9HBI5 128 aa7.23□□□□□ -1.25
NIF3L1-209ENST00000454952 ZBTB26Q9HCK0 441 aa7.23□□□□□ -1.25
NIF3L1-209ENST00000454952 Q9N2J8 555 aa7.23□□□□□ -1.25
NIF3L1-209ENST00000454952 SLC35C2Q9NQQ7 365 aa7.23□□□□□ -1.25
NIF3L1-209ENST00000454952 GLRX2Q9NS18 164 aa7.23□□□□□ -1.25
NIF3L1-209ENST00000454952 FAM120CQ9NX05 1096 aaKnown RBP7.23□□□□□ -1.25
NIF3L1-209ENST00000454952 XPR1Q9UBH6 696 aa7.23□□□□□ -1.25
NIF3L1-209ENST00000454952 WBP11Q9Y2W2 641 aaKnown RBP7.23□□□□□ -1.25
NIF3L1-209ENST00000454952 SNX8Q9Y5X2 465 aa7.23□□□□□ -1.25
NIF3L1-209ENST00000454952 USF3Q68DE3 2245 aa7.22□□□□□ -1.25
NIF3L1-209ENST00000454952 A0A087WV62 115 aa7.22□□□□□ -1.25
NIF3L1-209ENST00000454952 MANBAO00462 879 aa7.22□□□□□ -1.25
NIF3L1-209ENST00000454952 SCO2O43819 266 aa7.22□□□□□ -1.25
NIF3L1-209ENST00000454952 ULK1O75385 1050 aa7.22□□□□□ -1.25
NIF3L1-209ENST00000454952 PLGP00747 810 aaPredicted RBP7.22□□□□□ -1.25
NIF3L1-209ENST00000454952 CGAP01215 116 aa7.22□□□□□ -1.25
NIF3L1-209ENST00000454952 ENO1P06733 434 aaKnown RBP7.22□□□□□ -1.25
NIF3L1-209ENST00000454952 IL3P08700 152 aa7.22□□□□□ -1.25
NIF3L1-209ENST00000454952 IFI6P09912 130 aa7.22□□□□□ -1.25
NIF3L1-209ENST00000454952 TCEA1P23193 301 aaKnown RBP7.22□□□□□ -1.25
NIF3L1-209ENST00000454952 HMOX2P30519 316 aa7.22□□□□□ -1.25
NIF3L1-209ENST00000454952 MAGEA12P43365 314 aa7.22□□□□□ -1.25
NIF3L1-209ENST00000454952 CTBP2P56545 445 aa7.22□□□□□ -1.25
NIF3L1-209ENST00000454952 RELBQ01201 579 aa7.22□□□□□ -1.25
NIF3L1-209ENST00000454952 C2orf54Q08AI8 447 aa7.22□□□□□ -1.25
NIF3L1-209ENST00000454952 ZNF155Q12901 538 aaPredicted RBP7.22□□□□□ -1.25
NIF3L1-209ENST00000454952 PON3Q15166 354 aa7.22□□□□□ -1.25
NIF3L1-209ENST00000454952 LGSNQ5TDP6 509 aa7.22□□□□□ -1.25
NIF3L1-209ENST00000454952 LETMD1Q6P1Q0 360 aa7.22□□□□□ -1.25
NIF3L1-209ENST00000454952 ZDHHC24Q6UX98 284 aa7.22□□□□□ -1.25
NIF3L1-209ENST00000454952 SH2D5Q6ZV89 423 aa7.22□□□□□ -1.25
NIF3L1-209ENST00000454952 GPRIN3Q6ZVF9 776 aa7.22□□□□□ -1.25
NIF3L1-209ENST00000454952 CXXC5Q7LFL8 322 aaKnown RBP7.22□□□□□ -1.25
NIF3L1-209ENST00000454952 EXOC3L1Q86VI1 746 aa7.22□□□□□ -1.25
NIF3L1-209ENST00000454952 LCA5Q86VQ0 697 aa7.22□□□□□ -1.25
NIF3L1-209ENST00000454952 PRIMA1Q86XR5 153 aa7.22□□□□□ -1.25
NIF3L1-209ENST00000454952 RELL1Q8IUW5 271 aa7.22□□□□□ -1.25
NIF3L1-209ENST00000454952 CIARTQ8N365 385 aaPredicted RBP7.22□□□□□ -1.25
NIF3L1-209ENST00000454952 METTL25Q8N6Q8 603 aa7.22□□□□□ -1.25
NIF3L1-209ENST00000454952 OR6K3Q8NGY3 331 aa7.22□□□□□ -1.25
NIF3L1-209ENST00000454952 UHMK1Q8TAS1 419 aaKnown RBP7.22□□□□□ -1.25
NIF3L1-209ENST00000454952 FNDC9Q8TBE3 224 aa7.22□□□□□ -1.25
NIF3L1-209ENST00000454952 FIG4Q92562 907 aa7.22□□□□□ -1.25
NIF3L1-209ENST00000454952 KAT2AQ92830 837 aa7.22□□□□□ -1.25
NIF3L1-209ENST00000454952 EXOSC8Q96B26 276 aaKnown RBP7.22□□□□□ -1.25
NIF3L1-209ENST00000454952 EFHD2Q96C19 240 aaPredicted RBP7.22□□□□□ -1.25
NIF3L1-209ENST00000454952 C1GALT1C1Q96EU7 318 aa7.22□□□□□ -1.25
NIF3L1-209ENST00000454952 ZC3HAV1LQ96H79 300 aaKnown RBP7.22□□□□□ -1.25
NIF3L1-209ENST00000454952 MARK4Q96L34 752 aa7.22□□□□□ -1.25
NIF3L1-209ENST00000454952 NSUN5Q96P11 429 aaKnown RBP7.22□□□□□ -1.25
NIF3L1-209ENST00000454952 BBS4Q96RK4 519 aa7.22□□□□□ -1.25
NIF3L1-209ENST00000454952 ZNF382Q96SR6 550 aa7.22□□□□□ -1.25
NIF3L1-209ENST00000454952 FUT8Q9BYC5 575 aa7.22□□□□□ -1.25
NIF3L1-209ENST00000454952 PRRG4Q9BZD6 226 aa7.22□□□□□ -1.25
NIF3L1-209ENST00000454952 TBL1XR1Q9BZK7 514 aa7.22□□□□□ -1.25
NIF3L1-209ENST00000454952 KLHL4Q9C0H6 718 aa7.22□□□□□ -1.25
NIF3L1-209ENST00000454952 IQCGQ9H095 443 aaKnown RBP7.22□□□□□ -1.25
NIF3L1-209ENST00000454952 FARSBQ9NSD9 589 aaKnown RBP7.22□□□□□ -1.25
NIF3L1-209ENST00000454952 ZNF701Q9NV72 531 aaPredicted RBP7.22□□□□□ -1.25
NIF3L1-209ENST00000454952 MCTS1Q9ULC4 181 aaKnown RBP7.22□□□□□ -1.25
NIF3L1-209ENST00000454952 GRID1Q9ULK0 1009 aa7.22□□□□□ -1.25
NIF3L1-209ENST00000454952 A0A087WZY1 265 aa7.21□□□□□ -1.26
NIF3L1-209ENST00000454952 IGLV3-32A0A0A0MS00 114 aa7.21□□□□□ -1.26
NIF3L1-209ENST00000454952 OR2M5A3KFT3 312 aa7.21□□□□□ -1.26
NIF3L1-209ENST00000454952 TRIM64A6NGJ6 449 aa7.21□□□□□ -1.26
NIF3L1-209ENST00000454952 TRIM64BA6NI03 449 aa7.21□□□□□ -1.26
NIF3L1-209ENST00000454952 INAFM1C9JVW0 142 aa7.21□□□□□ -1.26
NIF3L1-209ENST00000454952 H3BML4 177 aa7.21□□□□□ -1.26
NIF3L1-209ENST00000454952 H3BQF6 201 aa7.21□□□□□ -1.26
NIF3L1-209ENST00000454952 HS3ST1O14792 307 aa7.21□□□□□ -1.26
NIF3L1-209ENST00000454952 SEC14L5O43304 696 aa7.21□□□□□ -1.26
NIF3L1-209ENST00000454952 FADS1O60427 444 aa7.21□□□□□ -1.26
NIF3L1-209ENST00000454952 KCNH1O95259 989 aa7.21□□□□□ -1.26
NIF3L1-209ENST00000454952 SYNGR4O95473 234 aa7.21□□□□□ -1.26
NIF3L1-209ENST00000454952 FESP07332 822 aa7.21□□□□□ -1.26
NIF3L1-209ENST00000454952 PABPC4LP0CB38 370 aaKnown RBP7.21□□□□□ -1.26
NIF3L1-209ENST00000454952 ZNF17P17021 662 aa7.21□□□□□ -1.26
NIF3L1-209ENST00000454952 DDCP20711 480 aa7.21□□□□□ -1.26
NIF3L1-209ENST00000454952 IL11P20809 199 aa7.21□□□□□ -1.26
NIF3L1-209ENST00000454952 NTSP30990 170 aa7.21□□□□□ -1.26
NIF3L1-209ENST00000454952 CASQ1P31415 396 aa7.21□□□□□ -1.26
NIF3L1-209ENST00000454952 TIA1P31483 386 aaKnown RBP eCLIP7.21□□□□□ -1.26
NIF3L1-209ENST00000454952 CCKARP32238 428 aa7.21□□□□□ -1.26
NIF3L1-209ENST00000454952 HSD17B3P37058 310 aa7.21□□□□□ -1.26
NIF3L1-209ENST00000454952 CDH13P55290 713 aa7.21□□□□□ -1.26
NIF3L1-209ENST00000454952 PKNOX1P55347 436 aa7.21□□□□□ -1.26
NIF3L1-209ENST00000454952 ATP5J2P56134 94 aa7.21□□□□□ -1.26
NIF3L1-209ENST00000454952 CLDN15P56746 228 aa7.21□□□□□ -1.26
NIF3L1-209ENST00000454952 PSMA6P60900 246 aaKnown RBP7.21□□□□□ -1.26
NIF3L1-209ENST00000454952 CLCQ05315 142 aa7.21□□□□□ -1.26
NIF3L1-209ENST00000454952 DUSP2Q05923 314 aa7.21□□□□□ -1.26
NIF3L1-209ENST00000454952 CKAP4Q07065 602 aaKnown RBP7.21□□□□□ -1.26
NIF3L1-209ENST00000454952 ZNF763Q0D2J5 394 aa7.21□□□□□ -1.26
NIF3L1-209ENST00000454952 C17orf67Q0P5P2 114 aa7.21□□□□□ -1.26
NIF3L1-209ENST00000454952 GUSBP1Q15486 140 aa7.21□□□□□ -1.26
NIF3L1-209ENST00000454952 PDSS1Q5T2R2 415 aa7.21□□□□□ -1.26
NIF3L1-209ENST00000454952 GTF2IRD2BQ6EKJ0 949 aa7.21□□□□□ -1.26
NIF3L1-209ENST00000454952 GALNT18Q6P9A2 607 aa7.21□□□□□ -1.26
NIF3L1-209ENST00000454952 PLXDC2Q6UX71 529 aa7.21□□□□□ -1.26
NIF3L1-209ENST00000454952 NPSR1Q6W5P4 371 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms