RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 CARM1Q86X55 608 aa5.55□□□□□ -1.52
SDC4P-201ENST00000453285 C9orf40Q8IXQ3 194 aa5.55□□□□□ -1.52
SDC4P-201ENST00000453285 HS3ST5Q8IZT8 346 aa5.55□□□□□ -1.52
SDC4P-201ENST00000453285 CLIP4Q8N3C7 705 aa5.55□□□□□ -1.52
SDC4P-201ENST00000453285 GALNT4Q8N4A0 578 aa5.55□□□□□ -1.52
SDC4P-201ENST00000453285 CBR4Q8N4T8 237 aa5.55□□□□□ -1.52
SDC4P-201ENST00000453285 PACRGLQ8N7B6 248 aa5.55□□□□□ -1.52
SDC4P-201ENST00000453285 BCORP1Q8N888 145 aa5.55□□□□□ -1.52
SDC4P-201ENST00000453285 ZNF441Q8N8Z8 693 aa5.55□□□□□ -1.52
SDC4P-201ENST00000453285 APCDD1LQ8NCL9 501 aa5.55□□□□□ -1.52
SDC4P-201ENST00000453285 OR4C15Q8NGM1 316 aa5.55□□□□□ -1.52
SDC4P-201ENST00000453285 OR52P1PQ8NH57 321 aa5.55□□□□□ -1.52
SDC4P-201ENST00000453285 OR5K1Q8NHB7 308 aa5.55□□□□□ -1.52
SDC4P-201ENST00000453285 PHF10Q8WUB8 498 aaKnown RBP5.55□□□□□ -1.52
SDC4P-201ENST00000453285 DNAJC9Q8WXX5 260 aa5.55□□□□□ -1.52
SDC4P-201ENST00000453285 EME1Q96AY2 570 aa5.55□□□□□ -1.52
SDC4P-201ENST00000453285 RMND5BQ96G75 393 aaPredicted RBP5.55□□□□□ -1.52
SDC4P-201ENST00000453285 VPS50Q96JG6 964 aa5.55□□□□□ -1.52
SDC4P-201ENST00000453285 ART5Q96L15 291 aa5.55□□□□□ -1.52
SDC4P-201ENST00000453285 DHRS1Q96LJ7 313 aa5.55□□□□□ -1.52
SDC4P-201ENST00000453285 ZNF597Q96LX8 424 aa5.55□□□□□ -1.52
SDC4P-201ENST00000453285 LMF1Q96S06 567 aa5.55□□□□□ -1.52
SDC4P-201ENST00000453285 ZNF184Q99676 751 aaPredicted RBP5.55□□□□□ -1.52
SDC4P-201ENST00000453285 BARD1Q99728 777 aaKnown RBP5.55□□□□□ -1.52
SDC4P-201ENST00000453285 ARHGDIGQ99819 225 aa5.55□□□□□ -1.52
SDC4P-201ENST00000453285 CRB3Q9BUF7 120 aa5.55□□□□□ -1.52
SDC4P-201ENST00000453285 C9orf16Q9BUW7 83 aa5.55□□□□□ -1.52
SDC4P-201ENST00000453285 SPATA5L1Q9BVQ7 753 aa5.55□□□□□ -1.52
SDC4P-201ENST00000453285 B3GNT4Q9C0J1 378 aa5.55□□□□□ -1.52
SDC4P-201ENST00000453285 NXF5Q9H1B4 397 aaKnown RBP5.55□□□□□ -1.52
SDC4P-201ENST00000453285 VCX3BQ9H321 246 aa5.55□□□□□ -1.52
SDC4P-201ENST00000453285 ACER3Q9NUN7 267 aa5.55□□□□□ -1.52
SDC4P-201ENST00000453285 FOXJ2Q9P0K8 574 aa5.55□□□□□ -1.52
SDC4P-201ENST00000453285 GPN3Q9UHW5 284 aaPredicted RBP5.55□□□□□ -1.52
SDC4P-201ENST00000453285 NXT1Q9UKK6 140 aaKnown RBP5.55□□□□□ -1.52
SDC4P-201ENST00000453285 ACAD8Q9UKU7 415 aa5.55□□□□□ -1.52
SDC4P-201ENST00000453285 PADI1Q9ULC6 663 aa5.55□□□□□ -1.52
SDC4P-201ENST00000453285 CBLCQ9ULV8 474 aa5.55□□□□□ -1.52
SDC4P-201ENST00000453285 CFL2Q9Y281 166 aa5.55□□□□□ -1.52
SDC4P-201ENST00000453285 ZNF443Q9Y2A4 671 aaPredicted RBP5.55□□□□□ -1.52
SDC4P-201ENST00000453285 C15orf41Q9Y2V0 281 aa5.55□□□□□ -1.52
SDC4P-201ENST00000453285 IFT52Q9Y366 437 aa5.55□□□□□ -1.52
SDC4P-201ENST00000453285 PCDHGA10Q9Y5H3 936 aa5.55□□□□□ -1.52
SDC4P-201ENST00000453285 C2orf92A0A1B0GVN3 265 aa5.54□□□□□ -1.52
SDC4P-201ENST00000453285 A0A1W2PQ72 361 aa5.54□□□□□ -1.52
SDC4P-201ENST00000453285 FRG2CA6NGY1 282 aa5.54□□□□□ -1.52
SDC4P-201ENST00000453285 TMEM200CA6NKL6 621 aa5.54□□□□□ -1.52
SDC4P-201ENST00000453285 CLDN24A6NM45 220 aa5.54□□□□□ -1.52
SDC4P-201ENST00000453285 C9J4A7 227 aa5.54□□□□□ -1.52
SDC4P-201ENST00000453285 G3V2T6 193 aa5.54□□□□□ -1.52
SDC4P-201ENST00000453285 M0R3H8 397 aa5.54□□□□□ -1.52
SDC4P-201ENST00000453285 PEX12O00623 359 aa5.54□□□□□ -1.52
SDC4P-201ENST00000453285 GNGT2O14610 69 aa5.54□□□□□ -1.52
SDC4P-201ENST00000453285 EI24O14681 340 aa5.54□□□□□ -1.52
SDC4P-201ENST00000453285 DYRK3O43781 588 aa5.54□□□□□ -1.52
SDC4P-201ENST00000453285 TSPAN2O60636 221 aa5.54□□□□□ -1.52
SDC4P-201ENST00000453285 ZNF354AO60765 605 aaPredicted RBP5.54□□□□□ -1.52
SDC4P-201ENST00000453285 BCAS1O75363 584 aaPredicted RBP5.54□□□□□ -1.52
SDC4P-201ENST00000453285 IL33O95760 270 aa5.54□□□□□ -1.52
SDC4P-201ENST00000453285 IFNW1P05000 195 aa5.54□□□□□ -1.52
SDC4P-201ENST00000453285 DBIP07108 87 aaKnown RBP5.54□□□□□ -1.52
SDC4P-201ENST00000453285 RAB40ALP0C0E4 278 aa5.54□□□□□ -1.52
SDC4P-201ENST00000453285 CEACAM1P13688 526 aa5.54□□□□□ -1.52
SDC4P-201ENST00000453285 NID1P14543 1247 aa5.54□□□□□ -1.52
SDC4P-201ENST00000453285 ZNF23P17027 643 aa5.54□□□□□ -1.52
SDC4P-201ENST00000453285 ITGA2P17301 1181 aa5.54□□□□□ -1.52
SDC4P-201ENST00000453285 RHCEP18577 417 aa5.54□□□□□ -1.52
SDC4P-201ENST00000453285 FPR1P21462 350 aa5.54□□□□□ -1.52
SDC4P-201ENST00000453285 PRKACGP22612 351 aa5.54□□□□□ -1.52
SDC4P-201ENST00000453285 RRM2P31350 389 aa5.54□□□□□ -1.52
SDC4P-201ENST00000453285 DNAJA1P31689 397 aaKnown RBP5.54□□□□□ -1.52
SDC4P-201ENST00000453285 YAP1P46937 504 aaKnown RBP5.54□□□□□ -1.52
SDC4P-201ENST00000453285 ZNF136P52737 540 aa5.54□□□□□ -1.52
SDC4P-201ENST00000453285 ATP12AP54707 1039 aa5.54□□□□□ -1.52
SDC4P-201ENST00000453285 SLC26A5P58743 744 aa5.54□□□□□ -1.52
SDC4P-201ENST00000453285 DCAF7P61962 342 aa5.54□□□□□ -1.52
SDC4P-201ENST00000453285 RNF4P78317 190 aa5.54□□□□□ -1.52
SDC4P-201ENST00000453285 HPCAP84074 193 aa5.54□□□□□ -1.52
SDC4P-201ENST00000453285 PPP2R2BQ00005 443 aa5.54□□□□□ -1.52
SDC4P-201ENST00000453285 NHLH1Q02575 133 aa5.54□□□□□ -1.52
SDC4P-201ENST00000453285 DAG1Q14118 895 aa5.54□□□□□ -1.52
SDC4P-201ENST00000453285 ZNF141Q15928 474 aa5.54□□□□□ -1.52
SDC4P-201ENST00000453285 NNATQ16517 81 aa5.54□□□□□ -1.52
SDC4P-201ENST00000453285 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.54□□□□□ -1.52
SDC4P-201ENST00000453285 CMPK2Q5EBM0 449 aa5.54□□□□□ -1.52
SDC4P-201ENST00000453285 SHQ1Q6PI26 577 aaKnown RBP5.54□□□□□ -1.52
SDC4P-201ENST00000453285 PAPD4Q6PIY7 484 aaKnown RBP5.54□□□□□ -1.52
SDC4P-201ENST00000453285 STK32CQ86UX6 486 aa5.54□□□□□ -1.52
SDC4P-201ENST00000453285 TMPRSS12Q86WS5 348 aa5.54□□□□□ -1.52
SDC4P-201ENST00000453285 MARCH9Q86YJ5 346 aa5.54□□□□□ -1.52
SDC4P-201ENST00000453285 PEX5LQ8IYB4 626 aa5.54□□□□□ -1.52
SDC4P-201ENST00000453285 SVOPLQ8N434 492 aa5.54□□□□□ -1.52
SDC4P-201ENST00000453285 PIK3C3Q8NEB9 887 aa5.54□□□□□ -1.52
SDC4P-201ENST00000453285 C17orf47Q8NEP4 570 aa5.54□□□□□ -1.52
SDC4P-201ENST00000453285 B3GNT7Q8NFL0 401 aa5.54□□□□□ -1.52
SDC4P-201ENST00000453285 OR6T1Q8NGN1 323 aa5.54□□□□□ -1.52
SDC4P-201ENST00000453285 OR2Y1Q8NGV0 311 aa5.54□□□□□ -1.52
SDC4P-201ENST00000453285 OR4C3Q8NH37 302 aa5.54□□□□□ -1.52
SDC4P-201ENST00000453285 VANGL1Q8TAA9 524 aaPredicted RBP5.54□□□□□ -1.52
SDC4P-201ENST00000453285 CT55Q8WUE5 264 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms