RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 C16orf58Q96GQ5 468 aa8.79□□□□□ -1
USP54-207ENST00000451492 METTL2AQ96IZ6 378 aaKnown RBP8.79□□□□□ -1
USP54-207ENST00000451492 MS4A4EQ96PG1 132 aa8.79□□□□□ -1
USP54-207ENST00000451492 SPOCK3Q9BQ16 436 aa8.79□□□□□ -1
USP54-207ENST00000451492 ZNF559Q9BR84 538 aa8.79□□□□□ -1
USP54-207ENST00000451492 LMF2Q9BU23 707 aaKnown RBP8.79□□□□□ -1
USP54-207ENST00000451492 TMEM109Q9BVC6 243 aa8.79□□□□□ -1
USP54-207ENST00000451492 RTN4RQ9BZR6 473 aa8.79□□□□□ -1
USP54-207ENST00000451492 C3orf14Q9HBI5 128 aa8.79□□□□□ -1
USP54-207ENST00000451492 TAS2R7Q9NYW3 318 aa8.79□□□□□ -1
USP54-207ENST00000451492 MRTO4Q9UKD2 239 aaKnown RBP8.79□□□□□ -1
USP54-207ENST00000451492 VDAC3Q9Y277 283 aa8.79□□□□□ -1
USP54-207ENST00000451492 WBP11Q9Y2W2 641 aaKnown RBP8.79□□□□□ -1
USP54-207ENST00000451492 NUP214P35658 2090 aaPredicted RBP8.79□□□□□ -1
USP54-207ENST00000451492 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.78□□□□□ -1
USP54-207ENST00000451492 NPIPA5A0A0B4J1W7 369 aa8.78□□□□□ -1
USP54-207ENST00000451492 A0A1W2PRB8 838 aa8.78□□□□□ -1
USP54-207ENST00000451492 CLCA1A8K7I4 914 aa8.78□□□□□ -1
USP54-207ENST00000451492 NPIPA7E9PJI5 369 aa8.78□□□□□ -1
USP54-207ENST00000451492 NPIPB8E9PQR5 432 aa8.78□□□□□ -1
USP54-207ENST00000451492 CFLARO15519 480 aa8.78□□□□□ -1
USP54-207ENST00000451492 EMC8O43402 210 aa8.78□□□□□ -1
USP54-207ENST00000451492 FADS1O60427 444 aa8.78□□□□□ -1
USP54-207ENST00000451492 IL33O95760 270 aa8.78□□□□□ -1
USP54-207ENST00000451492 ANGPTL1O95841 491 aa8.78□□□□□ -1
USP54-207ENST00000451492 C6orf47O95873 294 aa8.78□□□□□ -1
USP54-207ENST00000451492 EPPINO95925 133 aa8.78□□□□□ -1
USP54-207ENST00000451492 ACTL6AO96019 429 aa8.78□□□□□ -1
USP54-207ENST00000451492 SERPINE1P05121 402 aa8.78□□□□□ -1
USP54-207ENST00000451492 FGF4P08620 206 aa8.78□□□□□ -1
USP54-207ENST00000451492 MYZAPP0CAP1 466 aa8.78□□□□□ -1
USP54-207ENST00000451492 NPIPA8P0DM63 369 aa8.78□□□□□ -1
USP54-207ENST00000451492 TMIGD3P0DMS9 266 aaPredicted RBP8.78□□□□□ -1
USP54-207ENST00000451492 LAMP1P11279 417 aa8.78□□□□□ -1
USP54-207ENST00000451492 G6PDP11413 515 aa8.78□□□□□ -1
USP54-207ENST00000451492 IGFBP2P18065 325 aa8.78□□□□□ -1
USP54-207ENST00000451492 POU3F2P20265 443 aaPredicted RBP8.78□□□□□ -1
USP54-207ENST00000451492 SERPINB5P36952 375 aa8.78□□□□□ -1
USP54-207ENST00000451492 CLK3P49761 638 aaKnown RBP8.78□□□□□ -1
USP54-207ENST00000451492 LHX2P50458 406 aa8.78□□□□□ -1
USP54-207ENST00000451492 ZNF136P52737 540 aa8.78□□□□□ -1
USP54-207ENST00000451492 PSMD4P55036 377 aaKnown RBP8.78□□□□□ -1
USP54-207ENST00000451492 GFRA1P56159 465 aa8.78□□□□□ -1
USP54-207ENST00000451492 ABCE1P61221 599 aaKnown RBP8.78□□□□□ -1
USP54-207ENST00000451492 PSPHP78330 225 aa8.78□□□□□ -1
USP54-207ENST00000451492 LASP1Q14847 261 aaKnown RBP8.78□□□□□ -1
USP54-207ENST00000451492 PGS1Q32NB8 556 aa8.78□□□□□ -1
USP54-207ENST00000451492 SLC25A35Q3KQZ1 300 aa8.78□□□□□ -1
USP54-207ENST00000451492 VPS26BQ4G0F5 336 aa8.78□□□□□ -1
USP54-207ENST00000451492 CYP27C1Q4G0S4 372 aa8.78□□□□□ -1
USP54-207ENST00000451492 NHSL2Q5HYW2 709 aa8.78□□□□□ -1
USP54-207ENST00000451492 C6orf136Q5SQH8 315 aa8.78□□□□□ -1
USP54-207ENST00000451492 NSUN5P2Q63ZY6 315 aa8.78□□□□□ -1
USP54-207ENST00000451492 MFSD12Q6NUT3 480 aa8.78□□□□□ -1
USP54-207ENST00000451492 AAGABQ6PD74 315 aa8.78□□□□□ -1
USP54-207ENST00000451492 P4HA3Q7Z4N8 544 aa8.78□□□□□ -1
USP54-207ENST00000451492 R3HCC1LQ7Z5L2 792 aaKnown RBP8.78□□□□□ -1
USP54-207ENST00000451492 ZAR1Q86SH2 424 aa8.78□□□□□ -1
USP54-207ENST00000451492 DMRTC2Q8IXT2 367 aaPredicted RBP8.78□□□□□ -1
USP54-207ENST00000451492 ZZZ3Q8IYH5 903 aa8.78□□□□□ -1
USP54-207ENST00000451492 COX18Q8N8Q8 333 aa8.78□□□□□ -1
USP54-207ENST00000451492 CDRT4Q8N9R6 151 aa8.78□□□□□ -1
USP54-207ENST00000451492 SLC16A11Q8NCK7 471 aa8.78□□□□□ -1
USP54-207ENST00000451492 OR2M3Q8NG83 312 aa8.78□□□□□ -1
USP54-207ENST00000451492 CDS1Q92903 461 aa8.78□□□□□ -1
USP54-207ENST00000451492 FAM120BQ96EK7 910 aaKnown RBP8.78□□□□□ -1
USP54-207ENST00000451492 GIMAP5Q96F15 307 aa8.78□□□□□ -1
USP54-207ENST00000451492 SH3YL1Q96HL8 342 aaPredicted RBP8.78□□□□□ -1
USP54-207ENST00000451492 SIRT3Q9NTG7 399 aaPredicted RBP8.78□□□□□ -1
USP54-207ENST00000451492 GIN1Q9NXP7 522 aa8.78□□□□□ -1
USP54-207ENST00000451492 RAB21Q9UL25 225 aa8.78□□□□□ -1
USP54-207ENST00000451492 ABCG2Q9UNQ0 655 aa8.78□□□□□ -1
USP54-207ENST00000451492 PCDHGB3Q9Y5G1 929 aa8.78□□□□□ -1
USP54-207ENST00000451492 ABCA12Q86UK0 2595 aa8.77□□□□□ -1
USP54-207ENST00000451492 ENO4A6NNW6 628 aa8.77□□□□□ -1.01
USP54-207ENST00000451492 H0YC42 278 aa8.77□□□□□ -1.01
USP54-207ENST00000451492 TBX19O60806 448 aa8.77□□□□□ -1.01
USP54-207ENST00000451492 ZWINTO95229 277 aa8.77□□□□□ -1.01
USP54-207ENST00000451492 OXSR1O95747 527 aaPredicted RBP8.77□□□□□ -1.01
USP54-207ENST00000451492 HMGN2P05204 90 aaKnown RBP8.77□□□□□ -1.01
USP54-207ENST00000451492 ALOX5P09917 674 aa8.77□□□□□ -1.01
USP54-207ENST00000451492 CEACAM8P31997 349 aaPredicted RBP8.77□□□□□ -1.01
USP54-207ENST00000451492 RPL3P39023 403 aaKnown RBP8.77□□□□□ -1.01
USP54-207ENST00000451492 FRKP42685 505 aaPredicted RBP8.77□□□□□ -1.01
USP54-207ENST00000451492 SLC1A6P48664 564 aa8.77□□□□□ -1.01
USP54-207ENST00000451492 ASCL1P50553 236 aa8.77□□□□□ -1.01
USP54-207ENST00000451492 TPD52P55327 224 aaPredicted RBP8.77□□□□□ -1.01
USP54-207ENST00000451492 DLX5P56178 289 aa8.77□□□□□ -1.01
USP54-207ENST00000451492 DSCR4P56555 118 aaPredicted RBP8.77□□□□□ -1.01
USP54-207ENST00000451492 PRR5P85299 388 aa8.77□□□□□ -1.01
USP54-207ENST00000451492 FOXF2Q12947 444 aa8.77□□□□□ -1.01
USP54-207ENST00000451492 SF3B4Q15427 424 aaKnown RBP eCLIP8.77□□□□□ -1.01
USP54-207ENST00000451492 DUSP5Q16690 384 aa8.77□□□□□ -1.01
USP54-207ENST00000451492 CPTPQ5TA50 214 aa8.77□□□□□ -1.01
USP54-207ENST00000451492 HHATQ5VTY9 493 aa8.77□□□□□ -1.01
USP54-207ENST00000451492 LRIG3Q6UXM1 1119 aa8.77□□□□□ -1.01
USP54-207ENST00000451492 APOOLQ6UXV4 268 aa8.77□□□□□ -1.01
USP54-207ENST00000451492 LUZP2Q86TE4 346 aa8.77□□□□□ -1.01
USP54-207ENST00000451492 GRAMD2AQ8IUY3 354 aa8.77□□□□□ -1.01
USP54-207ENST00000451492 CEP70Q8NHQ1 597 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms