RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 FIGNL1Q6PIW4 674 aa11.98□□□□□ -0.49
VPS33A-202ENST00000451053 RTL4Q6ZR62 310 aa11.98□□□□□ -0.49
VPS33A-202ENST00000451053 NET1Q7Z628 596 aaPredicted RBP11.98□□□□□ -0.49
VPS33A-202ENST00000451053 ZAR1Q86SH2 424 aa11.98□□□□□ -0.49
VPS33A-202ENST00000451053 PTRH1Q86Y79 214 aaKnown RBP11.98□□□□□ -0.49
VPS33A-202ENST00000451053 SLC30A8Q8IWU4 369 aa11.98□□□□□ -0.49
VPS33A-202ENST00000451053 OR10A6Q8NH74 314 aa11.98□□□□□ -0.49
VPS33A-202ENST00000451053 HGDQ93099 445 aa11.98□□□□□ -0.49
VPS33A-202ENST00000451053 UTP4Q969X6 686 aaKnown RBP11.98□□□□□ -0.49
VPS33A-202ENST00000451053 CCDC124Q96CT7 223 aaKnown RBP11.98□□□□□ -0.49
VPS33A-202ENST00000451053 ASB9Q96DX5 294 aa11.98□□□□□ -0.49
VPS33A-202ENST00000451053 REXO5Q96IC2 774 aaKnown RBP11.98□□□□□ -0.49
VPS33A-202ENST00000451053 CLPTM1LQ96KA5 538 aa11.98□□□□□ -0.49
VPS33A-202ENST00000451053 BBC3Q96PG8 261 aaPredicted RBP11.98□□□□□ -0.49
VPS33A-202ENST00000451053 ADOQ96SZ5 270 aa11.98□□□□□ -0.49
VPS33A-202ENST00000451053 BTBD2Q9BX70 525 aa11.98□□□□□ -0.49
VPS33A-202ENST00000451053 TRIM15Q9C019 465 aa11.98□□□□□ -0.49
VPS33A-202ENST00000451053 SH2D2AQ9NP31 389 aa11.98□□□□□ -0.49
VPS33A-202ENST00000451053 KLHL1Q9NR64 748 aa11.98□□□□□ -0.49
VPS33A-202ENST00000451053 FBXO34Q9NWN3 711 aa11.98□□□□□ -0.49
VPS33A-202ENST00000451053 LUZP4Q9P127 313 aa11.98□□□□□ -0.49
VPS33A-202ENST00000451053 SLC7A8Q9UHI5 535 aa11.98□□□□□ -0.49
VPS33A-202ENST00000451053 RRP15Q9Y3B9 282 aaKnown RBP11.98□□□□□ -0.49
VPS33A-202ENST00000451053 CHCHD2Q9Y6H1 151 aaPredicted RBP11.98□□□□□ -0.49
VPS33A-202ENST00000451053 EXPH5Q8NEV8 1989 aa11.98□□□□□ -0.49
VPS33A-202ENST00000451053 TRAV17A0A0B4J275 112 aa11.97□□□□□ -0.49
VPS33A-202ENST00000451053 DUXAA6NLW8 204 aa11.97□□□□□ -0.49
VPS33A-202ENST00000451053 G3V3Y1 287 aa11.97□□□□□ -0.49
VPS33A-202ENST00000451053 GSTA4O15217 222 aa11.97□□□□□ -0.49
VPS33A-202ENST00000451053 ASNA1O43681 348 aa11.97□□□□□ -0.49
VPS33A-202ENST00000451053 NME2P1O60361 137 aa11.97□□□□□ -0.49
VPS33A-202ENST00000451053 IL33O95760 270 aa11.97□□□□□ -0.49
VPS33A-202ENST00000451053 SP1P08047 785 aa11.97□□□□□ -0.49
VPS33A-202ENST00000451053 BMP2P12643 396 aa11.97□□□□□ -0.49
VPS33A-202ENST00000451053 CYP4B1P13584 511 aa11.97□□□□□ -0.49
VPS33A-202ENST00000451053 ETFAP13804 333 aa11.97□□□□□ -0.49
VPS33A-202ENST00000451053 NME2P22392 152 aa11.97□□□□□ -0.49
VPS33A-202ENST00000451053 IL12BP29460 328 aa11.97□□□□□ -0.49
VPS33A-202ENST00000451053 KRT20P35900 424 aa11.97□□□□□ -0.49
VPS33A-202ENST00000451053 DSTNP60981 165 aa11.97□□□□□ -0.49
VPS33A-202ENST00000451053 RBBP4Q09028 425 aa11.97□□□□□ -0.49
VPS33A-202ENST00000451053 FUT5Q11128 374 aa11.97□□□□□ -0.49
VPS33A-202ENST00000451053 TRAP1Q12931 704 aaKnown RBP11.97□□□□□ -0.49
VPS33A-202ENST00000451053 TRIM25Q14258 630 aaKnown RBP11.97□□□□□ -0.49
VPS33A-202ENST00000451053 ZNF169Q14929 603 aaPredicted RBP11.97□□□□□ -0.49
VPS33A-202ENST00000451053 PLEKHN1Q494U1 663 aaPredicted RBP11.97□□□□□ -0.49
VPS33A-202ENST00000451053 ZNF766Q5HY98 468 aa11.97□□□□□ -0.49
VPS33A-202ENST00000451053 DCST2Q5T1A1 773 aa11.97□□□□□ -0.49
VPS33A-202ENST00000451053 GCNT6Q5T4J0 391 aa11.97□□□□□ -0.49
VPS33A-202ENST00000451053 C1orf146Q5VVC0 180 aa11.97□□□□□ -0.49
VPS33A-202ENST00000451053 BICRALQ6AI39 1079 aa11.97□□□□□ -0.49
VPS33A-202ENST00000451053 OLIG3Q7RTU3 272 aa11.97□□□□□ -0.49
VPS33A-202ENST00000451053 IFNEQ86WN2 208 aa11.97□□□□□ -0.49
VPS33A-202ENST00000451053 CALHM3Q86XJ0 350 aa11.97□□□□□ -0.49
VPS33A-202ENST00000451053 C10orf67Q8IYJ2 551 aa11.97□□□□□ -0.49
VPS33A-202ENST00000451053 MICU2Q8IYU8 434 aa11.97□□□□□ -0.49
VPS33A-202ENST00000451053 DND1Q8IYX4 353 aaKnown RBP11.97□□□□□ -0.49
VPS33A-202ENST00000451053 C10orf111Q8N326 155 aa11.97□□□□□ -0.49
VPS33A-202ENST00000451053 RNF148Q8N7C7 305 aa11.97□□□□□ -0.49
VPS33A-202ENST00000451053 GOLM1Q8NBJ4 401 aa11.97□□□□□ -0.49
VPS33A-202ENST00000451053 PSD4Q8NDX1 1056 aa11.97□□□□□ -0.49
VPS33A-202ENST00000451053 FAM110BQ8TC76 370 aa11.97□□□□□ -0.49
VPS33A-202ENST00000451053 SPPL2AQ8TCT8 520 aa11.97□□□□□ -0.49
VPS33A-202ENST00000451053 PAQR8Q8TEZ7 354 aa11.97□□□□□ -0.49
VPS33A-202ENST00000451053 XAGE5Q8WWM1 108 aa11.97□□□□□ -0.49
VPS33A-202ENST00000451053 DIO2Q92813 273 aa11.97□□□□□ -0.49
VPS33A-202ENST00000451053 SCMH1Q96GD3 660 aa11.97□□□□□ -0.49
VPS33A-202ENST00000451053 SGCZQ96LD1 299 aa11.97□□□□□ -0.49
VPS33A-202ENST00000451053 C5orf34Q96MH7 638 aa11.97□□□□□ -0.49
VPS33A-202ENST00000451053 ZNF583Q96ND8 569 aa11.97□□□□□ -0.49
VPS33A-202ENST00000451053 COL21A1Q96P44 957 aa11.97□□□□□ -0.49
VPS33A-202ENST00000451053 NODALQ96S42 347 aa11.97□□□□□ -0.49
VPS33A-202ENST00000451053 TIMMDC1Q9NPL8 285 aa11.97□□□□□ -0.49
VPS33A-202ENST00000451053 RYDENQ9NUL5 291 aaKnown RBP11.97□□□□□ -0.49
VPS33A-202ENST00000451053 FLRT3Q9NZU0 649 aa11.97□□□□□ -0.49
VPS33A-202ENST00000451053 MAGEL2Q9UJ55 1249 aa11.97□□□□□ -0.49
VPS33A-202ENST00000451053 CNOT11Q9UKZ1 510 aaKnown RBP11.97□□□□□ -0.49
VPS33A-202ENST00000451053 B3GNT3Q9Y2A9 372 aa11.97□□□□□ -0.49
VPS33A-202ENST00000451053 EPG5Q9HCE0 2579 aa11.97□□□□□ -0.49
VPS33A-202ENST00000451053 A0A0G2JMM0 328 aa11.96□□□□□ -0.49
VPS33A-202ENST00000451053 A0A1W2PPB8 328 aa11.96□□□□□ -0.49
VPS33A-202ENST00000451053 A0A1W2PRS3 328 aa11.96□□□□□ -0.49
VPS33A-202ENST00000451053 ELOVL7A1L3X0 281 aa11.96□□□□□ -0.49
VPS33A-202ENST00000451053 PRAMEF27A3QJZ7 478 aa11.96□□□□□ -0.49
VPS33A-202ENST00000451053 OR6C70A6NIJ9 312 aa11.96□□□□□ -0.49
VPS33A-202ENST00000451053 KIR3DP1A8MWS1 328 aa11.96□□□□□ -0.49
VPS33A-202ENST00000451053 TP53I11O14683 189 aa11.96□□□□□ -0.49
VPS33A-202ENST00000451053 ICOSLGO75144 302 aa11.96□□□□□ -0.49
VPS33A-202ENST00000451053 NUDT7P0C024 238 aa11.96□□□□□ -0.49
VPS33A-202ENST00000451053 CD46P15529 392 aa11.96□□□□□ -0.49
VPS33A-202ENST00000451053 TCN1P20061 433 aaPredicted RBP11.96□□□□□ -0.49
VPS33A-202ENST00000451053 PNLIPRP2P54317 469 aa11.96□□□□□ -0.49
VPS33A-202ENST00000451053 GNA13Q14344 377 aa11.96□□□□□ -0.49
VPS33A-202ENST00000451053 FXNQ16595 210 aa11.96□□□□□ -0.49
VPS33A-202ENST00000451053 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.96□□□□□ -0.49
VPS33A-202ENST00000451053 ZNF630Q2M218 657 aaPredicted RBP11.96□□□□□ -0.49
VPS33A-202ENST00000451053 PRAMEF20Q5VT98 475 aa11.96□□□□□ -0.49
VPS33A-202ENST00000451053 SLC25A25Q6KCM7 469 aa11.96□□□□□ -0.49
VPS33A-202ENST00000451053 HEPHL1Q6MZM0 1159 aa11.96□□□□□ -0.49
VPS33A-202ENST00000451053 NUP54Q7Z3B4 507 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms