RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 SLC7A7Q9UM01 511 aa13.82□□□□□ -0.2
SF1-211ENST00000448404 TMA7Q9Y2S6 64 aaKnown RBP13.82□□□□□ -0.2
SF1-211ENST00000448404 WBP11Q9Y2W2 641 aaKnown RBP13.82□□□□□ -0.2
SF1-211ENST00000448404 WDR45Q9Y484 360 aa13.82□□□□□ -0.2
SF1-211ENST00000448404 EFCAB10A6NFE3 127 aa13.81□□□□□ -0.2
SF1-211ENST00000448404 RGS5O15539 181 aa13.81□□□□□ -0.2
SF1-211ENST00000448404 ST6GAL1P15907 406 aa13.81□□□□□ -0.2
SF1-211ENST00000448404 MAZP56270 477 aaKnown RBP13.81□□□□□ -0.2
SF1-211ENST00000448404 PUS10Q3MIT2 529 aaKnown RBP13.81□□□□□ -0.2
SF1-211ENST00000448404 TYW3Q6IPR3 259 aaKnown RBP13.81□□□□□ -0.2
SF1-211ENST00000448404 ZNF836Q6ZNA1 936 aa13.81□□□□□ -0.2
SF1-211ENST00000448404 SPATC1Q76KD6 591 aa13.81□□□□□ -0.2
SF1-211ENST00000448404 SLC44A3Q8N4M1 653 aa13.81□□□□□ -0.2
SF1-211ENST00000448404 OR4K14Q8NGD5 310 aa13.81□□□□□ -0.2
SF1-211ENST00000448404 DIO2Q92813 273 aa13.81□□□□□ -0.2
SF1-211ENST00000448404 ACTRT3Q9BYD9 372 aa13.81□□□□□ -0.2
SF1-211ENST00000448404 PITHD1Q9GZP4 211 aaPredicted RBP13.81□□□□□ -0.2
SF1-211ENST00000448404 C3orf14Q9HBI5 128 aa13.81□□□□□ -0.2
SF1-211ENST00000448404 LALBAP00709 142 aa13.81□□□□□ -0.2
SF1-211ENST00000448404 ALOX12P18054 663 aa13.81□□□□□ -0.2
SF1-211ENST00000448404 TEAD1P28347 426 aa13.81□□□□□ -0.2
SF1-211ENST00000448404 RPS15AP62244 130 aaKnown RBP13.81□□□□□ -0.2
SF1-211ENST00000448404 CSNK2BP67870 215 aa13.81□□□□□ -0.2
SF1-211ENST00000448404 SELENBP1Q13228 472 aa13.81□□□□□ -0.2
SF1-211ENST00000448404 FAM214AQ32MH5 1076 aa13.81□□□□□ -0.2
SF1-211ENST00000448404 STEAP3Q658P3 488 aa13.81□□□□□ -0.2
SF1-211ENST00000448404 GHDCQ8N2G8 530 aa13.81□□□□□ -0.2
SF1-211ENST00000448404 OR9Q1Q8NGQ5 310 aa13.81□□□□□ -0.2
SF1-211ENST00000448404 TBX5Q99593 518 aa13.81□□□□□ -0.2
SF1-211ENST00000448404 CDCA4Q9BXL8 241 aa13.81□□□□□ -0.2
SF1-211ENST00000448404 RACGAP1Q9H0H5 632 aa13.81□□□□□ -0.2
SF1-211ENST00000448404 BCL2L10Q9HD36 194 aa13.81□□□□□ -0.2
SF1-211ENST00000448404 FBXO8Q9NRD0 319 aa13.81□□□□□ -0.2
SF1-211ENST00000448404 HCN3Q9P1Z3 774 aa13.81□□□□□ -0.2
SF1-211ENST00000448404 KLHL3Q9UH77 587 aa13.81□□□□□ -0.2
SF1-211ENST00000448404 PILRAQ9UKJ1 303 aa13.81□□□□□ -0.2
SF1-211ENST00000448404 LSM2Q9Y333 95 aaKnown RBP13.81□□□□□ -0.2
SF1-211ENST00000448404 ARID1BQ8NFD5 2236 aaPredicted RBP13.81□□□□□ -0.2
SF1-211ENST00000448404 A0A0G2JPF8 293 aa13.8□□□□□ -0.2
SF1-211ENST00000448404 HNRNPCL2B2RXH8 293 aa13.8□□□□□ -0.2
SF1-211ENST00000448404 HNRNPCL3B7ZW38 293 aa13.8□□□□□ -0.2
SF1-211ENST00000448404 CCRL2O00421 344 aa13.8□□□□□ -0.2
SF1-211ENST00000448404 ADAM11O75078 769 aa13.8□□□□□ -0.2
SF1-211ENST00000448404 HNRNPCL4P0DMR1 293 aa13.8□□□□□ -0.2
SF1-211ENST00000448404 GSTM5P46439 218 aa13.8□□□□□ -0.2
SF1-211ENST00000448404 ILF3Q12906 894 aaKnown RBP eCLIP13.8□□□□□ -0.2
SF1-211ENST00000448404 TMEM64Q6YI46 380 aa13.8□□□□□ -0.2
SF1-211ENST00000448404 USP30Q70CQ3 517 aa13.8□□□□□ -0.2
SF1-211ENST00000448404 GDF7Q7Z4P5 450 aa13.8□□□□□ -0.2
SF1-211ENST00000448404 PARP16Q8N5Y8 322 aa13.8□□□□□ -0.2
SF1-211ENST00000448404 OR8J1Q8NGP2 316 aa13.8□□□□□ -0.2
SF1-211ENST00000448404 GRHL3Q8TE85 626 aa13.8□□□□□ -0.2
SF1-211ENST00000448404 FCGR1BQ92637 280 aa13.8□□□□□ -0.2
SF1-211ENST00000448404 TMEM80Q96HE8 168 aa13.8□□□□□ -0.2
SF1-211ENST00000448404 RIPOR3Q96MK2 946 aa13.8□□□□□ -0.2
SF1-211ENST00000448404 TTTY10Q9BZA0 68 aa13.8□□□□□ -0.2
SF1-211ENST00000448404 LMAN2LQ9H0V9 348 aa13.8□□□□□ -0.2
SF1-211ENST00000448404 B3GALT2O43825 422 aa13.8□□□□□ -0.2
SF1-211ENST00000448404 KIAA1024LP59773 190 aa13.8□□□□□ -0.2
SF1-211ENST00000448404 CCDC85BQ15834 202 aaPredicted RBP13.8□□□□□ -0.2
SF1-211ENST00000448404 CLPPQ16740 277 aaPredicted RBP13.8□□□□□ -0.2
SF1-211ENST00000448404 NDUFAF6Q330K2 333 aa13.8□□□□□ -0.2
SF1-211ENST00000448404 ATAD3BQ5T9A4 648 aa13.8□□□□□ -0.2
SF1-211ENST00000448404 C1orf94Q6P1W5 598 aa13.8□□□□□ -0.2
SF1-211ENST00000448404 VASH1Q7L8A9 365 aaPredicted RBP13.8□□□□□ -0.2
SF1-211ENST00000448404 RRM2BQ7LG56 351 aa13.8□□□□□ -0.2
SF1-211ENST00000448404 GPR151Q8TDV0 419 aa13.8□□□□□ -0.2
SF1-211ENST00000448404 CAPSLQ8WWF8 208 aa13.8□□□□□ -0.2
SF1-211ENST00000448404 DPH1Q9BZG8 443 aa13.8□□□□□ -0.2
SF1-211ENST00000448404 ZNF229Q9UJW7 825 aa13.8□□□□□ -0.2
SF1-211ENST00000448404 SPIN1Q9Y657 262 aaPredicted RBP13.8□□□□□ -0.2
SF1-211ENST00000448404 PCDH15Q96QU1 1955 aa13.8□□□□□ -0.2
SF1-211ENST00000448404 SOCS6O14544 535 aa13.79□□□□□ -0.2
SF1-211ENST00000448404 HTR2AP28223 471 aa13.79□□□□□ -0.2
SF1-211ENST00000448404 EIF2B5Q13144 721 aaKnown RBP13.79□□□□□ -0.2
SF1-211ENST00000448404 ZNF791Q3KP31 576 aaPredicted RBP13.79□□□□□ -0.2
SF1-211ENST00000448404 C22orf42Q6IC83 251 aa13.79□□□□□ -0.2
SF1-211ENST00000448404 USP43Q70EL4 1123 aa13.79□□□□□ -0.2
SF1-211ENST00000448404 DNAJA3Q96EY1 480 aa13.79□□□□□ -0.2
SF1-211ENST00000448404 SDF2Q99470 211 aa13.79□□□□□ -0.2
SF1-211ENST00000448404 CTRCQ99895 268 aa13.79□□□□□ -0.2
SF1-211ENST00000448404 ZFYVE21Q9BQ24 234 aa13.79□□□□□ -0.2
SF1-211ENST00000448404 PSD2Q9BQI7 771 aa13.79□□□□□ -0.2
SF1-211ENST00000448404 PINK1Q9BXM7 581 aa13.79□□□□□ -0.2
SF1-211ENST00000448404 ASPNQ9BXN1 380 aa13.79□□□□□ -0.2
SF1-211ENST00000448404 WDR12Q9GZL7 423 aaKnown RBP13.79□□□□□ -0.2
SF1-211ENST00000448404 ZNF443Q9Y2A4 671 aaPredicted RBP13.79□□□□□ -0.2
SF1-211ENST00000448404 DTX4Q9Y2E6 619 aa13.79□□□□□ -0.2
SF1-211ENST00000448404 A0A0A6YYC8 382 aaPredicted RBP13.79□□□□□ -0.2
SF1-211ENST00000448404 AGAP5A6NIR3 686 aa13.79□□□□□ -0.2
SF1-211ENST00000448404 I3L1I5 382 aaPredicted RBP13.79□□□□□ -0.2
SF1-211ENST00000448404 GUCY1B2O75343 617 aa13.79□□□□□ -0.2
SF1-211ENST00000448404 OMPP47874 163 aa13.79□□□□□ -0.2
SF1-211ENST00000448404 PLAURQ03405 335 aa13.79□□□□□ -0.2
SF1-211ENST00000448404 BHLHB9Q6PI77 547 aa13.79□□□□□ -0.2
SF1-211ENST00000448404 ZNF367Q7RTV3 350 aa13.79□□□□□ -0.2
SF1-211ENST00000448404 RASSF5Q8WWW0 418 aa13.79□□□□□ -0.2
SF1-211ENST00000448404 RNFT2Q96EX2 444 aa13.79□□□□□ -0.2
SF1-211ENST00000448404 SLC41A3Q96GZ6 507 aa13.79□□□□□ -0.2
SF1-211ENST00000448404 SAMD8Q96LT4 415 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms