RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 DLX5P56178 289 aa7.36□□□□□ -1.23
NEDD9-204ENST00000448183 TAS2R31P59538 309 aa7.36□□□□□ -1.23
NEDD9-204ENST00000448183 RPS26P11Q5JNZ5 115 aaPredicted RBP7.36□□□□□ -1.23
NEDD9-204ENST00000448183 FAM83FQ8NEG4 500 aaPredicted RBP7.36□□□□□ -1.23
NEDD9-204ENST00000448183 TMEM185AQ8NFB2 350 aa7.36□□□□□ -1.23
NEDD9-204ENST00000448183 OR7G1Q8NGA0 311 aa7.36□□□□□ -1.23
NEDD9-204ENST00000448183 GLYATL2Q8WU03 294 aa7.36□□□□□ -1.23
NEDD9-204ENST00000448183 SORCS1Q8WY21 1168 aa7.36□□□□□ -1.23
NEDD9-204ENST00000448183 TRIB2Q92519 343 aa7.36□□□□□ -1.23
NEDD9-204ENST00000448183 DCUN1D4Q92564 292 aa7.36□□□□□ -1.23
NEDD9-204ENST00000448183 ZNF587Q96SQ5 575 aaPredicted RBP7.36□□□□□ -1.23
NEDD9-204ENST00000448183 DPH1Q9BZG8 443 aa7.36□□□□□ -1.23
NEDD9-204ENST00000448183 HEBP1Q9NRV9 189 aa7.36□□□□□ -1.23
NEDD9-204ENST00000448183 A0A1W2PP55 124 aa7.36□□□□□ -1.23
NEDD9-204ENST00000448183 ANTXRLA6NF34 631 aa7.36□□□□□ -1.23
NEDD9-204ENST00000448183 VSTM2BA6NLU5 285 aa7.36□□□□□ -1.23
NEDD9-204ENST00000448183 CLDN24A6NM45 220 aa7.36□□□□□ -1.23
NEDD9-204ENST00000448183 SYNGR4O95473 234 aa7.36□□□□□ -1.23
NEDD9-204ENST00000448183 IFNGR1P15260 489 aa7.36□□□□□ -1.23
NEDD9-204ENST00000448183 IDH3GP51553 393 aaPredicted RBP7.36□□□□□ -1.23
NEDD9-204ENST00000448183 PRPS1P60891 318 aa7.36□□□□□ -1.23
NEDD9-204ENST00000448183 CSNK2A1P68400 391 aaPredicted RBP7.36□□□□□ -1.23
NEDD9-204ENST00000448183 ELOCQ15369 112 aa7.36□□□□□ -1.23
NEDD9-204ENST00000448183 NKPD1Q17RQ9 610 aa7.36□□□□□ -1.23
NEDD9-204ENST00000448183 INAVAQ3KP66 663 aa7.36□□□□□ -1.23
NEDD9-204ENST00000448183 TP53I3Q53FA7 332 aa7.36□□□□□ -1.23
NEDD9-204ENST00000448183 ZNF691Q5VV52 312 aa7.36□□□□□ -1.23
NEDD9-204ENST00000448183 HACD4Q5VWC8 232 aa7.36□□□□□ -1.23
NEDD9-204ENST00000448183 CARD17Q5XLA6 110 aa7.36□□□□□ -1.23
NEDD9-204ENST00000448183 AWAT2Q6E213 333 aa7.36□□□□□ -1.23
NEDD9-204ENST00000448183 FRMPD2BQ6IN97 320 aa7.36□□□□□ -1.23
NEDD9-204ENST00000448183 CRTC1Q6UUV9 634 aa7.36□□□□□ -1.23
NEDD9-204ENST00000448183 KDELC1Q6UW63 502 aa7.36□□□□□ -1.23
NEDD9-204ENST00000448183 SERINC5Q86VE9 423 aa7.36□□□□□ -1.23
NEDD9-204ENST00000448183 SLC35F2Q8IXU6 374 aa7.36□□□□□ -1.23
NEDD9-204ENST00000448183 ESX1Q8N693 406 aa7.36□□□□□ -1.23
NEDD9-204ENST00000448183 ZNF611Q8N823 705 aa7.36□□□□□ -1.23
NEDD9-204ENST00000448183 CSNK2A3Q8NEV1 391 aa7.36□□□□□ -1.23
NEDD9-204ENST00000448183 STK35Q8TDR2 534 aa7.36□□□□□ -1.23
NEDD9-204ENST00000448183 ADAMTS18Q8TE60 1221 aa7.36□□□□□ -1.23
NEDD9-204ENST00000448183 DOK4Q8TEW6 326 aa7.36□□□□□ -1.23
NEDD9-204ENST00000448183 CREB3L4Q8TEY5 395 aa7.36□□□□□ -1.23
NEDD9-204ENST00000448183 METTL2AQ96IZ6 378 aaKnown RBP7.36□□□□□ -1.23
NEDD9-204ENST00000448183 LDAHQ9H6V9 325 aa7.36□□□□□ -1.23
NEDD9-204ENST00000448183 PELI2Q9HAT8 420 aa7.36□□□□□ -1.23
NEDD9-204ENST00000448183 WDR6Q9NNW5 1121 aaKnown RBP7.36□□□□□ -1.23
NEDD9-204ENST00000448183 FAM86C1Q9NVL1 165 aa7.36□□□□□ -1.23
NEDD9-204ENST00000448183 PCDHA9Q9Y5H5 950 aa7.36□□□□□ -1.23
NEDD9-204ENST00000448183 IL1AP01583 271 aa7.36□□□□□ -1.23
NEDD9-204ENST00000448183 C6P13671 934 aa7.36□□□□□ -1.23
NEDD9-204ENST00000448183 GATMP50440 423 aa7.36□□□□□ -1.23
NEDD9-204ENST00000448183 WNT7BP56706 349 aa7.36□□□□□ -1.23
NEDD9-204ENST00000448183 ERVK-25P63136 954 aa7.36□□□□□ -1.23
NEDD9-204ENST00000448183 MAP4K2Q12851 820 aa7.36□□□□□ -1.23
NEDD9-204ENST00000448183 BCL7AQ4VC05 210 aa7.36□□□□□ -1.23
NEDD9-204ENST00000448183 GPR149Q86SP6 731 aa7.36□□□□□ -1.23
NEDD9-204ENST00000448183 CBARPQ8N350 705 aaPredicted RBP7.36□□□□□ -1.23
NEDD9-204ENST00000448183 PARP16Q8N5Y8 322 aa7.36□□□□□ -1.23
NEDD9-204ENST00000448183 Q8N9G6 341 aaPredicted RBP7.36□□□□□ -1.23
NEDD9-204ENST00000448183 ZMYND19Q96E35 227 aaPredicted RBP7.36□□□□□ -1.23
NEDD9-204ENST00000448183 OR1F2PQ96R84 312 aa7.36□□□□□ -1.23
NEDD9-204ENST00000448183 SPIN2AQ99865 258 aa7.36□□□□□ -1.23
NEDD9-204ENST00000448183 SPIN2BQ9BPZ2 258 aa7.36□□□□□ -1.23
NEDD9-204ENST00000448183 SYT11Q9BT88 431 aa7.36□□□□□ -1.23
NEDD9-204ENST00000448183 PINK1Q9BXM7 581 aa7.36□□□□□ -1.23
NEDD9-204ENST00000448183 HOXD1Q9GZZ0 328 aa7.36□□□□□ -1.23
NEDD9-204ENST00000448183 OR1A2Q9Y585 309 aa7.36□□□□□ -1.23
NEDD9-204ENST00000448183 TIMM8BQ9Y5J9 83 aaPredicted RBP7.36□□□□□ -1.23
NEDD9-204ENST00000448183 LRRC37A3O60309 1634 aa7.36□□□□□ -1.23
NEDD9-204ENST00000448183 A0A1W2PQU0 124 aa7.35□□□□□ -1.23
NEDD9-204ENST00000448183 ZNF736B4DX44 427 aaPredicted RBP7.35□□□□□ -1.23
NEDD9-204ENST00000448183 FZD9O00144 591 aa7.35□□□□□ -1.23
NEDD9-204ENST00000448183 NFKBIEO00221 500 aa7.35□□□□□ -1.23
NEDD9-204ENST00000448183 FBXO45P0C2W1 286 aa7.35□□□□□ -1.23
NEDD9-204ENST00000448183 C21orf33P30042 268 aaPredicted RBP7.35□□□□□ -1.23
NEDD9-204ENST00000448183 WDR5P61964 334 aaKnown RBP7.35□□□□□ -1.23
NEDD9-204ENST00000448183 SPCS2Q15005 226 aa7.35□□□□□ -1.23
NEDD9-204ENST00000448183 ACSM3Q53FZ2 586 aa7.35□□□□□ -1.23
NEDD9-204ENST00000448183 WDR45BQ5MNZ6 344 aa7.35□□□□□ -1.23
NEDD9-204ENST00000448183 CCDC71LQ8N9Z2 235 aa7.35□□□□□ -1.23
NEDD9-204ENST00000448183 ACBD4Q8NC06 268 aa7.35□□□□□ -1.23
NEDD9-204ENST00000448183 SPRYD4Q8WW59 207 aaPredicted RBP7.35□□□□□ -1.23
NEDD9-204ENST00000448183 ADAMTS14Q8WXS8 1223 aa7.35□□□□□ -1.23
NEDD9-204ENST00000448183 MS4A4EQ96PG1 132 aa7.35□□□□□ -1.23
NEDD9-204ENST00000448183 SSX3Q99909 188 aa7.35□□□□□ -1.23
NEDD9-204ENST00000448183 PPA2Q9H2U2 334 aa7.35□□□□□ -1.23
NEDD9-204ENST00000448183 IL26Q9NPH9 171 aa7.35□□□□□ -1.23
NEDD9-204ENST00000448183 KCNJ16Q9NPI9 418 aa7.35□□□□□ -1.23
NEDD9-204ENST00000448183 CLDND1Q9NY35 253 aa7.35□□□□□ -1.23
NEDD9-204ENST00000448183 LRFN1Q9P244 771 aa7.35□□□□□ -1.23
NEDD9-204ENST00000448183 C5AR2Q9P296 337 aa7.35□□□□□ -1.23
NEDD9-204ENST00000448183 CYP8B1Q9UNU6 501 aa7.35□□□□□ -1.23
NEDD9-204ENST00000448183 RNF215Q9Y6U7 377 aa7.35□□□□□ -1.23
NEDD9-204ENST00000448183 IRS2Q9Y4H2 1338 aa7.35□□□□□ -1.23
NEDD9-204ENST00000448183 LTN1O94822 1766 aa7.35□□□□□ -1.23
NEDD9-204ENST00000448183 ATG12O94817 140 aa7.35□□□□□ -1.23
NEDD9-204ENST00000448183 RHOP08100 348 aa7.35□□□□□ -1.23
NEDD9-204ENST00000448183 AKAIN1P0CW23 69 aa7.35□□□□□ -1.23
NEDD9-204ENST00000448183 TMEM225BP0DP42 221 aa7.35□□□□□ -1.23
NEDD9-204ENST00000448183 PRDX3P30048 256 aaKnown RBP7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms