RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	SNRPN	P63162	240 aa	Known RBP	11.77	□□□□□ -0.53
DDR1-238	ENST00000446312	GXYLT1	Q4G148	440 aa		11.77	□□□□□ -0.53
DDR1-238	ENST00000446312	TOR1AIP1	Q5JTV8	583 aa		11.77	□□□□□ -0.53
DDR1-238	ENST00000446312	SLC9B2	Q86UD5	537 aa		11.77	□□□□□ -0.53
DDR1-238	ENST00000446312	ADIPOR2	Q86V24	386 aa		11.77	□□□□□ -0.53
DDR1-238	ENST00000446312	MS4A3	Q96HJ5	214 aa		11.77	□□□□□ -0.53
DDR1-238	ENST00000446312	SAMD8	Q96LT4	415 aa		11.77	□□□□□ -0.53
DDR1-238	ENST00000446312	ZNF559	Q9BR84	538 aa		11.77	□□□□□ -0.53
DDR1-238	ENST00000446312	DPH7	Q9BTV6	452 aa		11.77	□□□□□ -0.53
DDR1-238	ENST00000446312	ENKD1	Q9H0I2	346 aa		11.77	□□□□□ -0.53
DDR1-238	ENST00000446312	ABCG5	Q9H222	651 aa		11.77	□□□□□ -0.53
DDR1-238	ENST00000446312	SLC25A19	Q9HC21	320 aa		11.77	□□□□□ -0.53
DDR1-238	ENST00000446312	ANKH	Q9HCJ1	492 aa		11.77	□□□□□ -0.53
DDR1-238	ENST00000446312	H2AFY2	Q9P0M6	372 aa	Predicted RBP	11.77	□□□□□ -0.53
DDR1-238	ENST00000446312	A4GNT	Q9UNA3	340 aa		11.77	□□□□□ -0.53
DDR1-238	ENST00000446312	HRH3	Q9Y5N1	445 aa		11.77	□□□□□ -0.53
DDR1-238	ENST00000446312	SIRT4	Q9Y6E7	314 aa	Predicted RBP	11.77	□□□□□ -0.53
DDR1-238	ENST00000446312	SCN5A	Q14524	2016 aa		11.77	□□□□□ -0.53
DDR1-238	ENST00000446312	SLC5A10	A0PJK1	596 aa		11.77	□□□□□ -0.53
DDR1-238	ENST00000446312	ERI3	O43414	337 aa	Known RBP	11.77	□□□□□ -0.53
DDR1-238	ENST00000446312	GATB	O75879	557 aa	Known RBP	11.77	□□□□□ -0.53
DDR1-238	ENST00000446312	UQCRC2	P22695	453 aa		11.77	□□□□□ -0.53
DDR1-238	ENST00000446312	TPMT	P51580	245 aa		11.77	□□□□□ -0.53
DDR1-238	ENST00000446312	VSX2	P58304	361 aa	Predicted RBP	11.77	□□□□□ -0.53
DDR1-238	ENST00000446312	HTRA3	P83110	453 aa		11.77	□□□□□ -0.53
DDR1-238	ENST00000446312	SRSF5	Q13243	272 aa	Known RBP	11.77	□□□□□ -0.53
DDR1-238	ENST00000446312	COMMD7	Q86VX2	200 aa		11.77	□□□□□ -0.53
DDR1-238	ENST00000446312	C12orf40	Q86WS4	652 aa		11.77	□□□□□ -0.53
DDR1-238	ENST00000446312	ZNF547	Q8IVP9	402 aa		11.77	□□□□□ -0.53
DDR1-238	ENST00000446312	ARL14	Q8N4G2	192 aa		11.77	□□□□□ -0.53
DDR1-238	ENST00000446312	C12orf76	Q8N812	135 aa	Predicted RBP	11.77	□□□□□ -0.53
DDR1-238	ENST00000446312	OR51A7	Q8NH64	312 aa		11.77	□□□□□ -0.53
DDR1-238	ENST00000446312	ZCCHC10	Q8TBK6	192 aa		11.77	□□□□□ -0.53
DDR1-238	ENST00000446312	ST8SIA4	Q92187	359 aa		11.77	□□□□□ -0.53
DDR1-238	ENST00000446312	RAD51AP1	Q96B01	352 aa		11.77	□□□□□ -0.53
DDR1-238	ENST00000446312	HHIP	Q96QV1	700 aa		11.77	□□□□□ -0.53
DDR1-238	ENST00000446312	NDUFB11	Q9NX14	153 aa		11.77	□□□□□ -0.53
DDR1-238	ENST00000446312	GSTK1	Q9Y2Q3	226 aa		11.77	□□□□□ -0.53
DDR1-238	ENST00000446312	IGLV3-16	A0A075B6K0	115 aa		11.76	□□□□□ -0.53
DDR1-238	ENST00000446312	FAM171A2	A8MVW0	826 aa		11.76	□□□□□ -0.53
DDR1-238	ENST00000446312		E9PI62	339 aa		11.76	□□□□□ -0.53
DDR1-238	ENST00000446312	PRKAR1A	P10644	381 aa		11.76	□□□□□ -0.53
DDR1-238	ENST00000446312	DCDC1	P59894	354 aa		11.76	□□□□□ -0.53
DDR1-238	ENST00000446312	ODF4	Q2M2E3	257 aa		11.76	□□□□□ -0.53
DDR1-238	ENST00000446312	FNDC3B	Q53EP0	1204 aa	Known RBP	11.76	□□□□□ -0.53
DDR1-238	ENST00000446312	HENMT1	Q5T8I9	393 aa	Known RBP	11.76	□□□□□ -0.53
DDR1-238	ENST00000446312	SFRP4	Q6FHJ7	346 aa	Predicted RBP	11.76	□□□□□ -0.53
DDR1-238	ENST00000446312	FAAP20	Q6NZ36	180 aa		11.76	□□□□□ -0.53
DDR1-238	ENST00000446312	GANC	Q8TET4	914 aa		11.76	□□□□□ -0.53
DDR1-238	ENST00000446312	TMEM255B	Q8WV15	326 aa		11.76	□□□□□ -0.53
DDR1-238	ENST00000446312	PITHD1	Q9GZP4	211 aa	Predicted RBP	11.76	□□□□□ -0.53
DDR1-238	ENST00000446312	GLIPR2	Q9H4G4	154 aa		11.76	□□□□□ -0.53
DDR1-238	ENST00000446312	ELAC1	Q9H777	363 aa	Known RBP	11.76	□□□□□ -0.53
DDR1-238	ENST00000446312	PCDHB16	Q9NRJ7	776 aa		11.76	□□□□□ -0.53
DDR1-238	ENST00000446312	SEMA4G	Q9NTN9	838 aa		11.76	□□□□□ -0.53
DDR1-238	ENST00000446312	SCML1	Q9UN30	329 aa		11.76	□□□□□ -0.53
DDR1-238	ENST00000446312	CENPVL1	A0A0U1RR11	272 aa		11.76	□□□□□ -0.53
DDR1-238	ENST00000446312	HIDE1	A8MVS5	230 aa		11.76	□□□□□ -0.53
DDR1-238	ENST00000446312		J3QLW9	94 aa		11.76	□□□□□ -0.53
DDR1-238	ENST00000446312	PLAT	P00750	562 aa		11.76	□□□□□ -0.53
DDR1-238	ENST00000446312	ADA	P00813	363 aa		11.76	□□□□□ -0.53
DDR1-238	ENST00000446312	LIMS3	P0CW19	117 aa		11.76	□□□□□ -0.53
DDR1-238	ENST00000446312	LIMS4	P0CW20	117 aa		11.76	□□□□□ -0.53
DDR1-238	ENST00000446312	ARSB	P15848	533 aa		11.76	□□□□□ -0.53
DDR1-238	ENST00000446312	ZNF19	P17023	458 aa		11.76	□□□□□ -0.53
DDR1-238	ENST00000446312	TRHR	P34981	398 aa	Predicted RBP	11.76	□□□□□ -0.53
DDR1-238	ENST00000446312	MC3R	P41968	323 aa		11.76	□□□□□ -0.53
DDR1-238	ENST00000446312	PCBP3	P57721	371 aa	Known RBP	11.76	□□□□□ -0.53
DDR1-238	ENST00000446312	ABAT	P80404	500 aa		11.76	□□□□□ -0.53
DDR1-238	ENST00000446312	OC90	Q02509	493 aa	Predicted RBP	11.76	□□□□□ -0.53
DDR1-238	ENST00000446312	MFSD13A	Q14CX5	517 aa		11.76	□□□□□ -0.53
DDR1-238	ENST00000446312	GLYR1	Q49A26	553 aa	Predicted RBP	11.76	□□□□□ -0.53
DDR1-238	ENST00000446312	CHMP1B	Q7LBR1	199 aa		11.76	□□□□□ -0.53
DDR1-238	ENST00000446312	RNF170	Q96K19	258 aa		11.76	□□□□□ -0.53
DDR1-238	ENST00000446312	ZNF607	Q96SK3	696 aa		11.76	□□□□□ -0.53
DDR1-238	ENST00000446312	NANS	Q9NR45	359 aa		11.76	□□□□□ -0.53
DDR1-238	ENST00000446312	ENAM	Q9NRM1	1142 aa		11.76	□□□□□ -0.53
DDR1-238	ENST00000446312	THSD1	Q9NS62	852 aa		11.76	□□□□□ -0.53
DDR1-238	ENST00000446312	IL36A	Q9UHA7	158 aa		11.76	□□□□□ -0.53
DDR1-238	ENST00000446312	MGAT4A	Q9UM21	535 aa		11.76	□□□□□ -0.53
DDR1-238	ENST00000446312	SPATA2	Q9UM82	520 aa		11.76	□□□□□ -0.53
DDR1-238	ENST00000446312	CHST2	Q9Y4C5	530 aa		11.76	□□□□□ -0.53
DDR1-238	ENST00000446312	GABRP	O00591	440 aa		11.75	□□□□□ -0.53
DDR1-238	ENST00000446312	SIGLEC5	O15389	551 aa		11.75	□□□□□ -0.53
DDR1-238	ENST00000446312	SOX30	O94993	753 aa		11.75	□□□□□ -0.53
DDR1-238	ENST00000446312	CXCL3	P19876	107 aa		11.75	□□□□□ -0.53
DDR1-238	ENST00000446312	PRPH2	P23942	346 aa		11.75	□□□□□ -0.53
DDR1-238	ENST00000446312	ARHGDIB	P52566	201 aa		11.75	□□□□□ -0.53
DDR1-238	ENST00000446312	SIGLEC14	Q08ET2	396 aa		11.75	□□□□□ -0.53
DDR1-238	ENST00000446312	SP140	Q13342	867 aa		11.75	□□□□□ -0.53
DDR1-238	ENST00000446312	ILK	Q13418	452 aa		11.75	□□□□□ -0.53
DDR1-238	ENST00000446312	ZNF311	Q5JNZ3	666 aa		11.75	□□□□□ -0.53
DDR1-238	ENST00000446312	ANKRD54	Q6NXT1	300 aa		11.75	□□□□□ -0.53
DDR1-238	ENST00000446312	TMEM81	Q6P7N7	255 aa		11.75	□□□□□ -0.53
DDR1-238	ENST00000446312	NR2C2AP	Q86WQ0	139 aa		11.75	□□□□□ -0.53
DDR1-238	ENST00000446312	PROKR2	Q8NFJ6	384 aa		11.75	□□□□□ -0.53
DDR1-238	ENST00000446312	OR9A2	Q8NGT5	310 aa		11.75	□□□□□ -0.53
DDR1-238	ENST00000446312	IRF7	Q92985	503 aa		11.75	□□□□□ -0.53
DDR1-238	ENST00000446312	TBC1D20	Q96BZ9	403 aa		11.75	□□□□□ -0.53
DDR1-238	ENST00000446312	INTS12	Q96CB8	462 aa	Known RBP	11.75	□□□□□ -0.53

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