RNA–Protein interactions for RNA: ENST00000445184.1

LINC01004-201, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 5 BASIC

Gene LINC01004, Length 686 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-201ENST00000445184 ZNF607Q96SK3 696 aa3.35□□□□□ -1.87
LINC01004-201ENST00000445184 SECISBP2Q96T21 854 aaKnown RBP3.35□□□□□ -1.87
LINC01004-201ENST00000445184 RPAP3Q9H6T3 665 aaPredicted RBP3.35□□□□□ -1.87
LINC01004-201ENST00000445184 C3orf14Q9HBI5 128 aa3.35□□□□□ -1.87
LINC01004-201ENST00000445184 SDF2L1Q9HCN8 221 aa3.35□□□□□ -1.87
LINC01004-201ENST00000445184 FZR1Q9UM11 496 aa3.35□□□□□ -1.87
LINC01004-201ENST00000445184 TOPAZ1Q8N9V7 1692 aa3.35□□□□□ -1.87
LINC01004-201ENST00000445184 KIF16BQ96L93 1317 aa3.35□□□□□ -1.87
LINC01004-201ENST00000445184 LRPPRCP42704 1394 aaKnown RBP3.35□□□□□ -1.87
LINC01004-201ENST00000445184 PLEKHG1Q9ULL1 1385 aa3.35□□□□□ -1.87
LINC01004-201ENST00000445184 RRBP1Q9P2E9 1410 aaKnown RBP3.35□□□□□ -1.87
LINC01004-201ENST00000445184 KIAA1107Q9UPP5 1409 aa3.35□□□□□ -1.87
LINC01004-201ENST00000445184 C1orf167Q5SNV9 1468 aa3.35□□□□□ -1.87
LINC01004-201ENST00000445184 CACNA1BQ00975 2339 aa3.35□□□□□ -1.87
LINC01004-201ENST00000445184 TRPM2O94759 1503 aa3.34□□□□□ -1.87
LINC01004-201ENST00000445184 ATRXP46100 2492 aa3.34□□□□□ -1.87
LINC01004-201ENST00000445184 CDC42BPBQ9Y5S2 1711 aa3.34□□□□□ -1.87
LINC01004-201ENST00000445184 TTC26A0AVF1 554 aa3.34□□□□□ -1.87
LINC01004-201ENST00000445184 MEX3AA1L020 520 aaKnown RBP3.34□□□□□ -1.87
LINC01004-201ENST00000445184 BCLAF3A2AJT9 711 aaKnown RBP3.34□□□□□ -1.87
LINC01004-201ENST00000445184 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.34□□□□□ -1.87
LINC01004-201ENST00000445184 INPP4BO15327 924 aa3.34□□□□□ -1.87
LINC01004-201ENST00000445184 ZSCAN12O43309 604 aa3.34□□□□□ -1.87
LINC01004-201ENST00000445184 CAVIN2O95810 425 aa3.34□□□□□ -1.87
LINC01004-201ENST00000445184 LYNP07948 512 aa3.34□□□□□ -1.87
LINC01004-201ENST00000445184 ANXA4P09525 319 aaPredicted RBP3.34□□□□□ -1.87
LINC01004-201ENST00000445184 ZNF853P0CG23 659 aa3.34□□□□□ -1.87
LINC01004-201ENST00000445184 CAPN2P17655 700 aa3.34□□□□□ -1.87
LINC01004-201ENST00000445184 TPSB2P20231 275 aa3.34□□□□□ -1.87
LINC01004-201ENST00000445184 PPP2R1AP30153 589 aa3.34□□□□□ -1.87
LINC01004-201ENST00000445184 MAP2K2P36507 400 aa3.34□□□□□ -1.87
LINC01004-201ENST00000445184 TSFMP43897 325 aaKnown RBP3.34□□□□□ -1.87
LINC01004-201ENST00000445184 PHEXP78562 749 aa3.34□□□□□ -1.87
LINC01004-201ENST00000445184 CBX1P83916 185 aa3.34□□□□□ -1.87
LINC01004-201ENST00000445184 IDI1Q13907 227 aa3.34□□□□□ -1.87
LINC01004-201ENST00000445184 BTG3Q14201 252 aaPredicted RBP3.34□□□□□ -1.87
LINC01004-201ENST00000445184 GCKRQ14397 625 aa3.34□□□□□ -1.87
LINC01004-201ENST00000445184 TPSAB1Q15661 275 aa3.34□□□□□ -1.87
LINC01004-201ENST00000445184 CD226Q15762 336 aa3.34□□□□□ -1.87
LINC01004-201ENST00000445184 TATDN3Q17R31 274 aa3.34□□□□□ -1.87
LINC01004-201ENST00000445184 RABL6Q3YEC7 729 aaPredicted RBP3.34□□□□□ -1.87
LINC01004-201ENST00000445184 FFAR4Q5NUL3 377 aa3.34□□□□□ -1.87
LINC01004-201ENST00000445184 STPG1Q5TH74 334 aa3.34□□□□□ -1.87
LINC01004-201ENST00000445184 PWWP2BQ6NUJ5 590 aa3.34□□□□□ -1.87
LINC01004-201ENST00000445184 KIF6Q6ZMV9 814 aa3.34□□□□□ -1.87
LINC01004-201ENST00000445184 CENPUQ71F23 418 aa3.34□□□□□ -1.87
LINC01004-201ENST00000445184 TBC1D10CQ8IV04 446 aa3.34□□□□□ -1.87
LINC01004-201ENST00000445184 EFCAB13Q8IY85 973 aa3.34□□□□□ -1.87
LINC01004-201ENST00000445184 PRSS33Q8NF86 280 aa3.34□□□□□ -1.87
LINC01004-201ENST00000445184 ATP8B4Q8TF62 1192 aa3.34□□□□□ -1.87
LINC01004-201ENST00000445184 SPRYD4Q8WW59 207 aaPredicted RBP3.34□□□□□ -1.87
LINC01004-201ENST00000445184 ITFG2Q969R8 447 aa3.34□□□□□ -1.87
LINC01004-201ENST00000445184 NABP1Q96AH0 204 aa3.34□□□□□ -1.87
LINC01004-201ENST00000445184 COQ2Q96H96 371 aa3.34□□□□□ -1.87
LINC01004-201ENST00000445184 CNDP1Q96KN2 507 aa3.34□□□□□ -1.87
LINC01004-201ENST00000445184 SENP8Q96LD8 212 aa3.34□□□□□ -1.87
LINC01004-201ENST00000445184 LITAFQ99732 161 aa3.34□□□□□ -1.87
LINC01004-201ENST00000445184 TBCDQ9BTW9 1192 aa3.34□□□□□ -1.87
LINC01004-201ENST00000445184 GPR174Q9BXC1 333 aa3.34□□□□□ -1.87
LINC01004-201ENST00000445184 NRN1Q9NPD7 142 aa3.34□□□□□ -1.87
LINC01004-201ENST00000445184 ZNF446Q9NWS9 450 aa3.34□□□□□ -1.87
LINC01004-201ENST00000445184 CHMP5Q9NZZ3 219 aa3.34□□□□□ -1.87
LINC01004-201ENST00000445184 EMCNQ9ULC0 261 aa3.34□□□□□ -1.87
LINC01004-201ENST00000445184 PPP1R3CQ9UQK1 317 aa3.34□□□□□ -1.87
LINC01004-201ENST00000445184 CHMP2BQ9UQN3 213 aa3.34□□□□□ -1.87
LINC01004-201ENST00000445184 NIP7Q9Y221 180 aaKnown RBP eCLIP3.34□□□□□ -1.87
LINC01004-201ENST00000445184 AP4B1Q9Y6B7 739 aa3.34□□□□□ -1.87
LINC01004-201ENST00000445184 METP08581 1390 aa3.34□□□□□ -1.88
LINC01004-201ENST00000445184 KTN1Q86UP2 1357 aaKnown RBP3.34□□□□□ -1.88
LINC01004-201ENST00000445184 SPTBN5Q9NRC6 3674 aaKnown RBP3.34□□□□□ -1.88
LINC01004-201ENST00000445184 VPS8Q8N3P4 1428 aa3.34□□□□□ -1.88
LINC01004-201ENST00000445184 TNRC6CQ9HCJ0 1690 aaKnown RBP3.33□□□□□ -1.88
LINC01004-201ENST00000445184 TRANK1O15050 2925 aa3.33□□□□□ -1.88
LINC01004-201ENST00000445184 C15orf38-AP3S2A0A0A6YYH1 394 aa3.33□□□□□ -1.88
LINC01004-201ENST00000445184 PPIAL4CA0A0B4J2A2 164 aa3.33□□□□□ -1.88
LINC01004-201ENST00000445184 IQCMA0A1B0GVH7 501 aa3.33□□□□□ -1.88
LINC01004-201ENST00000445184 AP3B1O00203 1094 aa3.33□□□□□ -1.88
LINC01004-201ENST00000445184 BTN3A3O00478 584 aa3.33□□□□□ -1.88
LINC01004-201ENST00000445184 CYB561D2O14569 222 aa3.33□□□□□ -1.88
LINC01004-201ENST00000445184 NUDT21O43809 227 aaKnown RBP3.33□□□□□ -1.88
LINC01004-201ENST00000445184 LMX1BO60663 402 aa3.33□□□□□ -1.88
LINC01004-201ENST00000445184 RAMP1O60894 148 aa3.33□□□□□ -1.88
LINC01004-201ENST00000445184 SNNO75324 88 aaPredicted RBP3.33□□□□□ -1.88
LINC01004-201ENST00000445184 SURF6O75683 361 aaKnown RBP3.33□□□□□ -1.88
LINC01004-201ENST00000445184 NXPH2O95156 264 aa3.33□□□□□ -1.88
LINC01004-201ENST00000445184 MBD3O95983 291 aa3.33□□□□□ -1.88
LINC01004-201ENST00000445184 CALCAP01258 141 aa3.33□□□□□ -1.88
LINC01004-201ENST00000445184 AMBPP02760 352 aa3.33□□□□□ -1.88
LINC01004-201ENST00000445184 PPIAL4GP0DN37 164 aa3.33□□□□□ -1.88
LINC01004-201ENST00000445184 IGFBP5P24593 272 aa3.33□□□□□ -1.88
LINC01004-201ENST00000445184 RGS4P49798 205 aa3.33□□□□□ -1.88
LINC01004-201ENST00000445184 KRTAP10-8P60410 259 aa3.33□□□□□ -1.88
LINC01004-201ENST00000445184 ERVK-16P61578 105 aa3.33□□□□□ -1.88
LINC01004-201ENST00000445184 CSTF1Q05048 431 aaKnown RBP3.33□□□□□ -1.88
LINC01004-201ENST00000445184 TFDP1Q14186 410 aa3.33□□□□□ -1.88
LINC01004-201ENST00000445184 KNOP1Q1ED39 458 aaKnown RBP3.33□□□□□ -1.88
LINC01004-201ENST00000445184 RABGAP1LQ5R372 815 aa3.33□□□□□ -1.88
LINC01004-201ENST00000445184 HACD2Q6Y1H2 254 aa3.33□□□□□ -1.88
LINC01004-201ENST00000445184 Q71RC1 249 aaPredicted RBP3.33□□□□□ -1.88
LINC01004-201ENST00000445184 CENPQQ7L2Z9 268 aaPredicted RBP3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms