RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 PRR5P85299 388 aa18.22■□□□□ 0.51
LRCH3-208ENST00000443727 C6orf136Q5SQH8 315 aa18.22■□□□□ 0.51
LRCH3-208ENST00000443727 ARSKQ6UWY0 536 aa18.22■□□□□ 0.51
LRCH3-208ENST00000443727 MARCH3Q86UD3 253 aa18.22■□□□□ 0.51
LRCH3-208ENST00000443727 TMEM200AQ86VY9 491 aa18.22■□□□□ 0.51
LRCH3-208ENST00000443727 FBXO30Q8TB52 745 aa18.22■□□□□ 0.51
LRCH3-208ENST00000443727 CHMP6Q96FZ7 201 aa18.22■□□□□ 0.51
LRCH3-208ENST00000443727 C3orf30Q96M34 536 aa18.22■□□□□ 0.51
LRCH3-208ENST00000443727 MED11Q9P086 117 aa18.22■□□□□ 0.51
LRCH3-208ENST00000443727 POLQO75417 2590 aa18.22■□□□□ 0.51
LRCH3-208ENST00000443727 MBD3L4A6NDZ8 208 aaPredicted RBP18.21■□□□□ 0.51
LRCH3-208ENST00000443727 MBD3L3A6NE82 208 aaPredicted RBP18.21■□□□□ 0.51
LRCH3-208ENST00000443727 MBD3L5A6NJ08 208 aaPredicted RBP18.21■□□□□ 0.51
LRCH3-208ENST00000443727 ESPNB1AK53 854 aa18.21■□□□□ 0.51
LRCH3-208ENST00000443727 ZIC3O60481 467 aa18.21■□□□□ 0.51
LRCH3-208ENST00000443727 ZWINTO95229 277 aa18.21■□□□□ 0.51
LRCH3-208ENST00000443727 HK1P19367 917 aa18.21■□□□□ 0.51
LRCH3-208ENST00000443727 CHMP24386 653 aa18.21■□□□□ 0.51
LRCH3-208ENST00000443727 CTSSP25774 331 aa18.21■□□□□ 0.51
LRCH3-208ENST00000443727 OPRM1P35372 400 aa18.21■□□□□ 0.51
LRCH3-208ENST00000443727 FRKP42685 505 aaPredicted RBP18.21■□□□□ 0.51
LRCH3-208ENST00000443727 AGFG1P52594 562 aaKnown RBP18.21■□□□□ 0.51
LRCH3-208ENST00000443727 ZNF136P52737 540 aa18.21■□□□□ 0.51
LRCH3-208ENST00000443727 DLX5P56178 289 aa18.21■□□□□ 0.51
LRCH3-208ENST00000443727 CHI3L2Q15782 390 aa18.21■□□□□ 0.51
LRCH3-208ENST00000443727 CEP85LQ5SZL2 805 aa18.21■□□□□ 0.51
LRCH3-208ENST00000443727 CPTPQ5TA50 214 aa18.21■□□□□ 0.51
LRCH3-208ENST00000443727 IL23RQ5VWK5 629 aa18.21■□□□□ 0.51
LRCH3-208ENST00000443727 RAET1LQ5VY80 246 aa18.21■□□□□ 0.51
LRCH3-208ENST00000443727 CHMP1BQ7LBR1 199 aa18.21■□□□□ 0.51
LRCH3-208ENST00000443727 EXOC3L1Q86VI1 746 aa18.21■□□□□ 0.51
LRCH3-208ENST00000443727 RELL2Q8NC24 303 aaPredicted RBP18.21■□□□□ 0.51
LRCH3-208ENST00000443727 OR2M3Q8NG83 312 aa18.21■□□□□ 0.51
LRCH3-208ENST00000443727 OR7A2PQ8NGA2 310 aa18.21■□□□□ 0.51
LRCH3-208ENST00000443727 MBD3L2Q8NHZ7 208 aaPredicted RBP18.21■□□□□ 0.51
LRCH3-208ENST00000443727 DUSP19Q8WTR2 217 aa18.21■□□□□ 0.51
LRCH3-208ENST00000443727 JADE3Q92613 823 aa18.21■□□□□ 0.51
LRCH3-208ENST00000443727 ZBTB9Q96C00 473 aa18.21■□□□□ 0.51
LRCH3-208ENST00000443727 PRPF18Q99633 342 aaKnown RBP18.21■□□□□ 0.51
LRCH3-208ENST00000443727 ATAD3AQ9NVI7 634 aa18.21■□□□□ 0.51
LRCH3-208ENST00000443727 ATP6V1HQ9UI12 483 aa18.21■□□□□ 0.51
LRCH3-208ENST00000443727 ITGB1BP2Q9UKP3 347 aa18.21■□□□□ 0.51
LRCH3-208ENST00000443727 EIF3LQ9Y262 564 aaKnown RBP18.21■□□□□ 0.51
LRCH3-208ENST00000443727 SNX8Q9Y5X2 465 aa18.21■□□□□ 0.51
LRCH3-208ENST00000443727 ARHGAP21Q5T5U3 1957 aa18.21■□□□□ 0.5
LRCH3-208ENST00000443727 A0A1W2PRB8 838 aa18.2■□□□□ 0.5
LRCH3-208ENST00000443727 CLCA1A8K7I4 914 aa18.2■□□□□ 0.5
LRCH3-208ENST00000443727 EEF1E1-BLOC1S5C9J1V9 151 aa18.2■□□□□ 0.5
LRCH3-208ENST00000443727 SYT5O00445 386 aa18.2■□□□□ 0.5
LRCH3-208ENST00000443727 EEF1E1O43324 174 aaKnown RBP18.2■□□□□ 0.5
LRCH3-208ENST00000443727 LYPLA1O75608 230 aaPredicted RBP18.2■□□□□ 0.5
LRCH3-208ENST00000443727 NKX2-2O95096 273 aa18.2■□□□□ 0.5
LRCH3-208ENST00000443727 SERPINE1P05121 402 aa18.2■□□□□ 0.5
LRCH3-208ENST00000443727 TUBBP07437 444 aa18.2■□□□□ 0.5
LRCH3-208ENST00000443727 ALOX5P09917 674 aa18.2■□□□□ 0.5
LRCH3-208ENST00000443727 TMIGD3P0DMS9 266 aaPredicted RBP18.2■□□□□ 0.5
LRCH3-208ENST00000443727 PEX19P40855 299 aa18.2■□□□□ 0.5
LRCH3-208ENST00000443727 KIR2DL3P43628 341 aa18.2■□□□□ 0.5
LRCH3-208ENST00000443727 PRIM2P49643 509 aa18.2■□□□□ 0.5
LRCH3-208ENST00000443727 LHX2P50458 406 aa18.2■□□□□ 0.5
LRCH3-208ENST00000443727 SNTB1Q13884 538 aaKnown RBP18.2■□□□□ 0.5
LRCH3-208ENST00000443727 PTGR1Q14914 329 aa18.2■□□□□ 0.5
LRCH3-208ENST00000443727 GRAMD1BQ3KR37 738 aa18.2■□□□□ 0.5
LRCH3-208ENST00000443727 SPDYE7PQ495Y7 208 aa18.2■□□□□ 0.5
LRCH3-208ENST00000443727 MFSD12Q6NUT3 480 aa18.2■□□□□ 0.5
LRCH3-208ENST00000443727 GALNT10Q86SR1 603 aa18.2■□□□□ 0.5
LRCH3-208ENST00000443727 FADS6Q8N9I5 356 aa18.2■□□□□ 0.5
LRCH3-208ENST00000443727 C9orf106Q8NAJ2 232 aa18.2■□□□□ 0.5
LRCH3-208ENST00000443727 RNASE6Q93091 150 aaKnown RBP18.2■□□□□ 0.5
LRCH3-208ENST00000443727 TM9SF2Q99805 663 aa18.2■□□□□ 0.5
LRCH3-208ENST00000443727 SSU72Q9NP77 194 aaKnown RBP18.2■□□□□ 0.5
LRCH3-208ENST00000443727 KCNK9Q9NPC2 374 aa18.2■□□□□ 0.5
LRCH3-208ENST00000443727 NTMQ9P121 344 aa18.2■□□□□ 0.5
LRCH3-208ENST00000443727 RAB21Q9UL25 225 aa18.2■□□□□ 0.5
LRCH3-208ENST00000443727 L3MBTL1Q9Y468 752 aa18.2■□□□□ 0.5
LRCH3-208ENST00000443727 MED12Q93074 2177 aa18.2■□□□□ 0.5
LRCH3-208ENST00000443727 TM9SF1O15321 606 aa18.19■□□□□ 0.5
LRCH3-208ENST00000443727 BIRC5O15392 142 aa18.19■□□□□ 0.5
LRCH3-208ENST00000443727 GMFGO60234 142 aa18.19■□□□□ 0.5
LRCH3-208ENST00000443727 IGKV1D-16P01601 117 aa18.19■□□□□ 0.5
LRCH3-208ENST00000443727 MYZAPP0CAP1 466 aa18.19■□□□□ 0.5
LRCH3-208ENST00000443727 LAMP1P11279 417 aa18.19■□□□□ 0.5
LRCH3-208ENST00000443727 POU3F2P20265 443 aaPredicted RBP18.19■□□□□ 0.5
LRCH3-208ENST00000443727 C17orf67Q0P5P2 114 aa18.19■□□□□ 0.5
LRCH3-208ENST00000443727 MAD2L1Q13257 205 aaPredicted RBP18.19■□□□□ 0.5
LRCH3-208ENST00000443727 GANABQ14697 944 aaKnown RBP18.19■□□□□ 0.5
LRCH3-208ENST00000443727 CROCCP2Q86T23 111 aa18.19■□□□□ 0.5
LRCH3-208ENST00000443727 CDH24Q86UP0 819 aa18.19■□□□□ 0.5
LRCH3-208ENST00000443727 GRAMD2AQ8IUY3 354 aa18.19■□□□□ 0.5
LRCH3-208ENST00000443727 ZZZ3Q8IYH5 903 aa18.19■□□□□ 0.5
LRCH3-208ENST00000443727 UBQLNLQ8IYU4 475 aa18.19■□□□□ 0.5
LRCH3-208ENST00000443727 COX18Q8N8Q8 333 aa18.19■□□□□ 0.5
LRCH3-208ENST00000443727 SLC16A11Q8NCK7 471 aa18.19■□□□□ 0.5
LRCH3-208ENST00000443727 OR6Y1Q8NGX8 325 aa18.19■□□□□ 0.5
LRCH3-208ENST00000443727 WNT2BQ93097 391 aa18.19■□□□□ 0.5
LRCH3-208ENST00000443727 C16orf58Q96GQ5 468 aa18.19■□□□□ 0.5
LRCH3-208ENST00000443727 PPP1R36Q96LQ0 422 aa18.19■□□□□ 0.5
LRCH3-208ENST00000443727 YIPF4Q9BSR8 244 aa18.19■□□□□ 0.5
LRCH3-208ENST00000443727 ZCCHC3Q9NUD5 404 aaKnown RBP18.19■□□□□ 0.5
LRCH3-208ENST00000443727 FOXD3Q9UJU5 478 aaPredicted RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms