RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 FBXO34Q9NWN3 711 aa11.28□□□□□ -0.6
USP1-203ENST00000442679 FAM53CQ9NYF3 392 aa11.28□□□□□ -0.6
USP1-203ENST00000442679 FLRT3Q9NZU0 649 aa11.28□□□□□ -0.6
USP1-203ENST00000442679 A0A096LPI6 279 aa11.27□□□□□ -0.61
USP1-203ENST00000442679 GNB5O14775 395 aa11.27□□□□□ -0.61
USP1-203ENST00000442679 PDE9AO76083 593 aa11.27□□□□□ -0.61
USP1-203ENST00000442679 WISP1O95388 367 aa11.27□□□□□ -0.61
USP1-203ENST00000442679 AGR2O95994 175 aa11.27□□□□□ -0.61
USP1-203ENST00000442679 SNRPB2P08579 225 aaKnown RBP11.27□□□□□ -0.61
USP1-203ENST00000442679 ATP6V1C1P21283 382 aa11.27□□□□□ -0.61
USP1-203ENST00000442679 PTPN6P29350 595 aa11.27□□□□□ -0.61
USP1-203ENST00000442679 LCN1P31025 176 aa11.27□□□□□ -0.61
USP1-203ENST00000442679 MAGEA5P43359 124 aa11.27□□□□□ -0.61
USP1-203ENST00000442679 UQCRFS1P47985 274 aa11.27□□□□□ -0.61
USP1-203ENST00000442679 KHKP50053 298 aa11.27□□□□□ -0.61
USP1-203ENST00000442679 UBAP2LQ14157 1087 aaKnown RBP11.27□□□□□ -0.61
USP1-203ENST00000442679 SLC10A1Q14973 349 aa11.27□□□□□ -0.61
USP1-203ENST00000442679 GRAMD1BQ3KR37 738 aa11.27□□□□□ -0.61
USP1-203ENST00000442679 GTDC1Q4AE62 458 aa11.27□□□□□ -0.61
USP1-203ENST00000442679 PAGE3Q5JUK9 113 aa11.27□□□□□ -0.61
USP1-203ENST00000442679 ATAD3BQ5T9A4 648 aa11.27□□□□□ -0.61
USP1-203ENST00000442679 FNDC7Q5VTL7 733 aa11.27□□□□□ -0.61
USP1-203ENST00000442679 TIGD3Q6B0B8 471 aa11.27□□□□□ -0.61
USP1-203ENST00000442679 ZAR1Q86SH2 424 aa11.27□□□□□ -0.61
USP1-203ENST00000442679 FAM109AQ8N4B1 249 aa11.27□□□□□ -0.61
USP1-203ENST00000442679 OR1J4Q8NGS1 313 aa11.27□□□□□ -0.61
USP1-203ENST00000442679 OR4C3Q8NH37 302 aa11.27□□□□□ -0.61
USP1-203ENST00000442679 PNPT1Q8TCS8 783 aaKnown RBP11.27□□□□□ -0.61
USP1-203ENST00000442679 ZFP90Q8TF47 636 aa11.27□□□□□ -0.61
USP1-203ENST00000442679 RNF138Q8WVD3 245 aa11.27□□□□□ -0.61
USP1-203ENST00000442679 XAGE5Q8WWM1 108 aa11.27□□□□□ -0.61
USP1-203ENST00000442679 RAB8BQ92930 207 aa11.27□□□□□ -0.61
USP1-203ENST00000442679 GNRHR2Q96P88 292 aa11.27□□□□□ -0.61
USP1-203ENST00000442679 ZDHHC11Q9H8X9 412 aa11.27□□□□□ -0.61
USP1-203ENST00000442679 EXD2Q9NVH0 621 aa11.27□□□□□ -0.61
USP1-203ENST00000442679 B4GALT7Q9UBV7 327 aa11.27□□□□□ -0.61
USP1-203ENST00000442679 ABCG2Q9UNQ0 655 aa11.27□□□□□ -0.61
USP1-203ENST00000442679 PCDHB14Q9Y5E9 798 aa11.27□□□□□ -0.61
USP1-203ENST00000442679 SNPHO15079 494 aa11.26□□□□□ -0.61
USP1-203ENST00000442679 ANGPT2O15123 496 aa11.26□□□□□ -0.61
USP1-203ENST00000442679 SCO2O43819 266 aa11.26□□□□□ -0.61
USP1-203ENST00000442679 CDC40O60508 579 aaKnown RBP eCLIP11.26□□□□□ -0.61
USP1-203ENST00000442679 AK1P00568 194 aa11.26□□□□□ -0.61
USP1-203ENST00000442679 TBXA2RP21731 343 aa11.26□□□□□ -0.61
USP1-203ENST00000442679 ELAVL4P26378 380 aaKnown RBP11.26□□□□□ -0.61
USP1-203ENST00000442679 GDF1P27539 372 aa11.26□□□□□ -0.61
USP1-203ENST00000442679 ANXA11P50995 505 aaKnown RBP11.26□□□□□ -0.61
USP1-203ENST00000442679 GAS1P54826 345 aa11.26□□□□□ -0.61
USP1-203ENST00000442679 TXNL4AP83876 142 aaKnown RBP11.26□□□□□ -0.61
USP1-203ENST00000442679 KLF10Q13118 480 aa11.26□□□□□ -0.61
USP1-203ENST00000442679 EIF2S3LQ2VIR3 472 aaKnown RBP11.26□□□□□ -0.61
USP1-203ENST00000442679 ARHGAP11BQ3KRB8 267 aa11.26□□□□□ -0.61
USP1-203ENST00000442679 COX20Q5RI15 118 aa11.26□□□□□ -0.61
USP1-203ENST00000442679 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.26□□□□□ -0.61
USP1-203ENST00000442679 OR5M10Q6IEU7 315 aa11.26□□□□□ -0.61
USP1-203ENST00000442679 C16orf62Q7Z3J2 963 aa11.26□□□□□ -0.61
USP1-203ENST00000442679 MARCH3Q86UD3 253 aa11.26□□□□□ -0.61
USP1-203ENST00000442679 GHDCQ8N2G8 530 aa11.26□□□□□ -0.61
USP1-203ENST00000442679 WDSUB1Q8N9V3 476 aa11.26□□□□□ -0.61
USP1-203ENST00000442679 CHDHQ8NE62 594 aaPredicted RBP11.26□□□□□ -0.61
USP1-203ENST00000442679 TSPEARQ8WU66 669 aa11.26□□□□□ -0.61
USP1-203ENST00000442679 SDF2Q99470 211 aa11.26□□□□□ -0.61
USP1-203ENST00000442679 TBL1XR1Q9BZK7 514 aa11.26□□□□□ -0.61
USP1-203ENST00000442679 HOXD1Q9GZZ0 328 aa11.26□□□□□ -0.61
USP1-203ENST00000442679 ZNF703Q9H7S9 590 aaPredicted RBP11.26□□□□□ -0.61
USP1-203ENST00000442679 TPT1P8Q9HAU6 139 aa11.26□□□□□ -0.61
USP1-203ENST00000442679 SDHAF3Q9NRP4 125 aa11.26□□□□□ -0.61
USP1-203ENST00000442679 UBQLN4Q9NRR5 601 aa11.26□□□□□ -0.61
USP1-203ENST00000442679 SLAMF8Q9P0V8 285 aa11.26□□□□□ -0.61
USP1-203ENST00000442679 LEF1Q9UJU2 399 aaPredicted RBP11.26□□□□□ -0.61
USP1-203ENST00000442679 C15orf41Q9Y2V0 281 aa11.26□□□□□ -0.61
USP1-203ENST00000442679 NDUFAF1Q9Y375 327 aa11.26□□□□□ -0.61
USP1-203ENST00000442679 WIF1Q9Y5W5 379 aa11.26□□□□□ -0.61
USP1-203ENST00000442679 CLIC1O00299 241 aa11.25□□□□□ -0.61
USP1-203ENST00000442679 HMGN4O00479 90 aa11.25□□□□□ -0.61
USP1-203ENST00000442679 SCDO00767 359 aa11.25□□□□□ -0.61
USP1-203ENST00000442679 CCDC22O60826 627 aa11.25□□□□□ -0.61
USP1-203ENST00000442679 STX11O75558 287 aa11.25□□□□□ -0.61
USP1-203ENST00000442679 CBR3O75828 277 aa11.25□□□□□ -0.61
USP1-203ENST00000442679 TRAPPC6AO75865 159 aa11.25□□□□□ -0.61
USP1-203ENST00000442679 OXSR1O95747 527 aaPredicted RBP11.25□□□□□ -0.61
USP1-203ENST00000442679 NGFRP08138 427 aa11.25□□□□□ -0.61
USP1-203ENST00000442679 CELA3AP09093 270 aa11.25□□□□□ -0.61
USP1-203ENST00000442679 HPGDP15428 266 aa11.25□□□□□ -0.61
USP1-203ENST00000442679 CRATP43155 626 aa11.25□□□□□ -0.61
USP1-203ENST00000442679 MAGEA8P43361 318 aa11.25□□□□□ -0.61
USP1-203ENST00000442679 HSF1Q00613 529 aa11.25□□□□□ -0.61
USP1-203ENST00000442679 RBPJQ06330 500 aa11.25□□□□□ -0.61
USP1-203ENST00000442679 STX5Q13190 355 aa11.25□□□□□ -0.61
USP1-203ENST00000442679 TOMM20Q15388 145 aa11.25□□□□□ -0.61
USP1-203ENST00000442679 FLYWCH1Q4VC44 716 aa11.25□□□□□ -0.61
USP1-203ENST00000442679 LRIF1Q5T3J3 769 aa11.25□□□□□ -0.61
USP1-203ENST00000442679 HEPHL1Q6MZM0 1159 aa11.25□□□□□ -0.61
USP1-203ENST00000442679 APOOLQ6UXV4 268 aa11.25□□□□□ -0.61
USP1-203ENST00000442679 PLCZ1Q86YW0 608 aa11.25□□□□□ -0.61
USP1-203ENST00000442679 MSRB3Q8IXL7 192 aa11.25□□□□□ -0.61
USP1-203ENST00000442679 PRR7Q8TB68 274 aa11.25□□□□□ -0.61
USP1-203ENST00000442679 DUSP19Q8WTR2 217 aa11.25□□□□□ -0.61
USP1-203ENST00000442679 ROPN1LQ96C74 230 aa11.25□□□□□ -0.61
USP1-203ENST00000442679 AURKBQ96GD4 344 aaPredicted RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms