RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 FBXL2Q9UKC9 423 aa21.53■■□□□ 1.04
VARS-217ENST00000440048 FAM215AQ9Y5M1 114 aa21.53■■□□□ 1.04
VARS-217ENST00000440048 KLF2Q9Y5W3 355 aaPredicted RBP21.53■■□□□ 1.04
VARS-217ENST00000440048 PCNX3Q9H6A9 2034 aa21.53■■□□□ 1.04
VARS-217ENST00000440048 ARHGAP21Q5T5U3 1957 aa21.52■■□□□ 1.04
VARS-217ENST00000440048 GOLGA8QA0A0J9YX86 632 aa21.52■■□□□ 1.04
VARS-217ENST00000440048 GOLGA8OA6NCC3 632 aa21.52■■□□□ 1.04
VARS-217ENST00000440048 B4DXG7 233 aa21.52■■□□□ 1.04
VARS-217ENST00000440048 GOLGA8NF8WBI6 632 aa21.52■■□□□ 1.04
VARS-217ENST00000440048 UTS2O95399 124 aa21.52■■□□□ 1.04
VARS-217ENST00000440048 DCTP40126 519 aa21.52■■□□□ 1.04
VARS-217ENST00000440048 NUP107P57740 925 aa21.52■■□□□ 1.04
VARS-217ENST00000440048 HBA1P69905 142 aa21.52■■□□□ 1.04
VARS-217ENST00000440048 PMPCAQ10713 525 aa21.52■■□□□ 1.04
VARS-217ENST00000440048 SPATA19Q7Z5L4 167 aa21.52■■□□□ 1.04
VARS-217ENST00000440048 CLECL1Q8IZS7 167 aa21.52■■□□□ 1.04
VARS-217ENST00000440048 OR8J2Q8NGG1 315 aa21.52■■□□□ 1.04
VARS-217ENST00000440048 FAM110BQ8TC76 370 aa21.52■■□□□ 1.04
VARS-217ENST00000440048 SFXN5Q8TD22 340 aa21.52■■□□□ 1.04
VARS-217ENST00000440048 JADE3Q92613 823 aa21.52■■□□□ 1.04
VARS-217ENST00000440048 SDCCAG3Q96C92 435 aa21.52■■□□□ 1.04
VARS-217ENST00000440048 TIMP4Q99727 224 aa21.52■■□□□ 1.04
VARS-217ENST00000440048 RTN4RQ9BZR6 473 aa21.52■■□□□ 1.04
VARS-217ENST00000440048 OR2B2Q9GZK3 357 aa21.52■■□□□ 1.04
VARS-217ENST00000440048 AIG1Q9NVV5 245 aa21.52■■□□□ 1.04
VARS-217ENST00000440048 PCDHGB3Q9Y5G1 929 aa21.52■■□□□ 1.04
VARS-217ENST00000440048 KCNK2O95069 426 aa21.51■■□□□ 1.03
VARS-217ENST00000440048 GRNP28799 593 aaKnown RBP21.51■■□□□ 1.03
VARS-217ENST00000440048 KIR3DL1P43629 444 aa21.51■■□□□ 1.03
VARS-217ENST00000440048 TP53BP2Q13625 1128 aa21.51■■□□□ 1.03
VARS-217ENST00000440048 GRAMD1BQ3KR37 738 aa21.51■■□□□ 1.03
VARS-217ENST00000440048 NHSL2Q5HYW2 709 aa21.51■■□□□ 1.03
VARS-217ENST00000440048 C1orf185Q5T7R7 199 aa21.51■■□□□ 1.03
VARS-217ENST00000440048 ZNF787Q6DD87 383 aa21.51■■□□□ 1.03
VARS-217ENST00000440048 VASNQ6EMK4 673 aa21.51■■□□□ 1.03
VARS-217ENST00000440048 FIGNL1Q6PIW4 674 aa21.51■■□□□ 1.03
VARS-217ENST00000440048 B3GNT6Q6ZMB0 384 aa21.51■■□□□ 1.03
VARS-217ENST00000440048 ACAD11Q709F0 780 aa21.51■■□□□ 1.03
VARS-217ENST00000440048 GALNT10Q86SR1 603 aa21.51■■□□□ 1.03
VARS-217ENST00000440048 GOLGA6L1Q8N7Z2 621 aa21.51■■□□□ 1.03
VARS-217ENST00000440048 COX18Q8N8Q8 333 aa21.51■■□□□ 1.03
VARS-217ENST00000440048 PIWIL2Q8TC59 973 aaKnown RBP21.51■■□□□ 1.03
VARS-217ENST00000440048 RND1Q92730 232 aa21.51■■□□□ 1.03
VARS-217ENST00000440048 TESCQ96BS2 214 aa21.51■■□□□ 1.03
VARS-217ENST00000440048 MOAP1Q96BY2 351 aa21.51■■□□□ 1.03
VARS-217ENST00000440048 UGT2B28Q9BY64 529 aa21.51■■□□□ 1.03
VARS-217ENST00000440048 GPATCH2Q9NW75 528 aa21.51■■□□□ 1.03
VARS-217ENST00000440048 COQ3Q9NZJ6 369 aa21.51■■□□□ 1.03
VARS-217ENST00000440048 PPP4R1LQ9P1A2 415 aa21.51■■□□□ 1.03
VARS-217ENST00000440048 HMGB1P1B2RPK0 211 aaPredicted RBP21.5■■□□□ 1.03
VARS-217ENST00000440048 RNASET2O00584 256 aaKnown RBP21.5■■□□□ 1.03
VARS-217ENST00000440048 CLDN14O95500 239 aa21.5■■□□□ 1.03
VARS-217ENST00000440048 HOXD4P09016 255 aaPredicted RBP21.5■■□□□ 1.03
VARS-217ENST00000440048 GABRA1P14867 456 aa21.5■■□□□ 1.03
VARS-217ENST00000440048 BMP7P18075 431 aa21.5■■□□□ 1.03
VARS-217ENST00000440048 HTR1EP28566 365 aa21.5■■□□□ 1.03
VARS-217ENST00000440048 SRD5A2P31213 254 aa21.5■■□□□ 1.03
VARS-217ENST00000440048 CLK3P49761 638 aaKnown RBP21.5■■□□□ 1.03
VARS-217ENST00000440048 CLNS1AP54105 237 aaKnown RBP21.5■■□□□ 1.03
VARS-217ENST00000440048 NME5P56597 212 aa21.5■■□□□ 1.03
VARS-217ENST00000440048 PHC1P78364 1004 aa21.5■■□□□ 1.03
VARS-217ENST00000440048 CDC73Q6P1J9 531 aa21.5■■□□□ 1.03
VARS-217ENST00000440048 MAVSQ7Z434 540 aa21.5■■□□□ 1.03
VARS-217ENST00000440048 MARCH3Q86UD3 253 aa21.5■■□□□ 1.03
VARS-217ENST00000440048 ULK2Q8IYT8 1036 aa21.5■■□□□ 1.03
VARS-217ENST00000440048 OR4K17Q8NGC6 315 aa21.5■■□□□ 1.03
VARS-217ENST00000440048 OR5AK3PQ8NH89 298 aa21.5■■□□□ 1.03
VARS-217ENST00000440048 OR14L1PQ8NHC6 308 aa21.5■■□□□ 1.03
VARS-217ENST00000440048 CDS1Q92903 461 aa21.5■■□□□ 1.03
VARS-217ENST00000440048 ABTB1Q969K4 478 aaPredicted RBP21.5■■□□□ 1.03
VARS-217ENST00000440048 CHMP6Q96FZ7 201 aa21.5■■□□□ 1.03
VARS-217ENST00000440048 STACQ99469 402 aa21.5■■□□□ 1.03
VARS-217ENST00000440048 TTYH2Q9BSA4 534 aa21.5■■□□□ 1.03
VARS-217ENST00000440048 BTBD2Q9BX70 525 aa21.5■■□□□ 1.03
VARS-217ENST00000440048 ACTRT3Q9BYD9 372 aa21.5■■□□□ 1.03
VARS-217ENST00000440048 PIGUQ9H490 435 aa21.5■■□□□ 1.03
VARS-217ENST00000440048 SDHAF3Q9NRP4 125 aa21.5■■□□□ 1.03
VARS-217ENST00000440048 DUSP22Q9NRW4 184 aa21.5■■□□□ 1.03
VARS-217ENST00000440048 FBXO34Q9NWN3 711 aa21.5■■□□□ 1.03
VARS-217ENST00000440048 RNF6Q9Y252 685 aa21.5■■□□□ 1.03
VARS-217ENST00000440048 PKDREJQ9NTG1 2253 aa21.5■■□□□ 1.03
VARS-217ENST00000440048 LRBAP50851 2863 aa21.5■■□□□ 1.03
VARS-217ENST00000440048 ZNF195O14628 629 aa21.49■■□□□ 1.03
VARS-217ENST00000440048 SCN2BO60939 215 aa21.49■■□□□ 1.03
VARS-217ENST00000440048 GLI4P10075 376 aa21.49■■□□□ 1.03
VARS-217ENST00000440048 SOAT1P35610 550 aa21.49■■□□□ 1.03
VARS-217ENST00000440048 UFM1P61960 85 aa21.49■■□□□ 1.03
VARS-217ENST00000440048 POU6F2P78424 691 aaPredicted RBP21.49■■□□□ 1.03
VARS-217ENST00000440048 STX5Q13190 355 aa21.49■■□□□ 1.03
VARS-217ENST00000440048 CPEB4Q17RY0 729 aaKnown RBP eCLIP21.49■■□□□ 1.03
VARS-217ENST00000440048 ZNF630Q2M218 657 aaPredicted RBP21.49■■□□□ 1.03
VARS-217ENST00000440048 SLC9B1Q4ZJI4 515 aa21.49■■□□□ 1.03
VARS-217ENST00000440048 SPANXN4Q5MJ08 99 aa21.49■■□□□ 1.03
VARS-217ENST00000440048 DCST1Q5T197 706 aa21.49■■□□□ 1.03
VARS-217ENST00000440048 SP5Q6BEB4 398 aaPredicted RBP21.49■■□□□ 1.03
VARS-217ENST00000440048 NXNQ6DKJ4 435 aa21.49■■□□□ 1.03
VARS-217ENST00000440048 APOOLQ6UXV4 268 aa21.49■■□□□ 1.03
VARS-217ENST00000440048 ZAR1Q86SH2 424 aa21.49■■□□□ 1.03
VARS-217ENST00000440048 FADS6Q8N9I5 356 aa21.49■■□□□ 1.03
VARS-217ENST00000440048 DTNBP1Q96EV8 351 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms