RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 HGDQ93099 445 aa16.19■□□□□ 0.18
CCDC188-201ENST00000439765 GIMAP5Q96F15 307 aa16.19■□□□□ 0.18
CCDC188-201ENST00000439765 ITCHQ96J02 903 aa16.19■□□□□ 0.18
CCDC188-201ENST00000439765 ZNF597Q96LX8 424 aa16.19■□□□□ 0.18
CCDC188-201ENST00000439765 CCDC115Q96NT0 180 aa16.19■□□□□ 0.18
CCDC188-201ENST00000439765 COL21A1Q96P44 957 aa16.19■□□□□ 0.18
CCDC188-201ENST00000439765 NODALQ96S42 347 aa16.19■□□□□ 0.18
CCDC188-201ENST00000439765 LMF2Q9BU23 707 aaKnown RBP16.19■□□□□ 0.18
CCDC188-201ENST00000439765 CXorf36Q9H7Y0 433 aa16.19■□□□□ 0.18
CCDC188-201ENST00000439765 EFCAB1Q9HAE3 211 aa16.19■□□□□ 0.18
CCDC188-201ENST00000439765 IL1RL2Q9HB29 575 aa16.19■□□□□ 0.18
CCDC188-201ENST00000439765 C3orf14Q9HBI5 128 aa16.19■□□□□ 0.18
CCDC188-201ENST00000439765 GALNT9Q9HCQ5 603 aa16.19■□□□□ 0.18
CCDC188-201ENST00000439765 NEUROD4Q9HD90 331 aa16.19■□□□□ 0.18
CCDC188-201ENST00000439765 SERHLQ9NQF3 203 aa16.19■□□□□ 0.18
CCDC188-201ENST00000439765 KLRF1Q9NZS2 232 aa16.19■□□□□ 0.18
CCDC188-201ENST00000439765 SH3BGRL2Q9UJC5 107 aa16.19■□□□□ 0.18
CCDC188-201ENST00000439765 BOKQ9UMX3 212 aaPredicted RBP16.19■□□□□ 0.18
CCDC188-201ENST00000439765 OR6C70A6NIJ9 312 aa16.18■□□□□ 0.18
CCDC188-201ENST00000439765 RRP9O43818 475 aaKnown RBP16.18■□□□□ 0.18
CCDC188-201ENST00000439765 ZG16O60844 167 aa16.18■□□□□ 0.18
CCDC188-201ENST00000439765 PDE9AO76083 593 aa16.18■□□□□ 0.18
CCDC188-201ENST00000439765 GLSO94925 669 aaPredicted RBP16.18■□□□□ 0.18
CCDC188-201ENST00000439765 CASP3P42574 277 aa16.18■□□□□ 0.18
CCDC188-201ENST00000439765 MASP1P48740 699 aa16.18■□□□□ 0.18
CCDC188-201ENST00000439765 HBA1P69905 142 aa16.18■□□□□ 0.18
CCDC188-201ENST00000439765 RPP38P78345 283 aaKnown RBP16.18■□□□□ 0.18
CCDC188-201ENST00000439765 BNIP1Q12981 228 aa16.18■□□□□ 0.18
CCDC188-201ENST00000439765 TP53BP2Q13625 1128 aa16.18■□□□□ 0.18
CCDC188-201ENST00000439765 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.18■□□□□ 0.18
CCDC188-201ENST00000439765 KRTCAP3Q53RY4 240 aa16.18■□□□□ 0.18
CCDC188-201ENST00000439765 TBCELQ5QJ74 424 aa16.18■□□□□ 0.18
CCDC188-201ENST00000439765 C1QL3Q5VWW1 255 aa16.18■□□□□ 0.18
CCDC188-201ENST00000439765 MFSD12Q6NUT3 480 aa16.18■□□□□ 0.18
CCDC188-201ENST00000439765 FJX1Q86VR8 437 aa16.18■□□□□ 0.18
CCDC188-201ENST00000439765 GHDCQ8N2G8 530 aa16.18■□□□□ 0.18
CCDC188-201ENST00000439765 FAM109AQ8N4B1 249 aa16.18■□□□□ 0.18
CCDC188-201ENST00000439765 PCYOX1LQ8NBM8 494 aa16.18■□□□□ 0.18
CCDC188-201ENST00000439765 GPR151Q8TDV0 419 aa16.18■□□□□ 0.18
CCDC188-201ENST00000439765 PIK3R3Q92569 461 aa16.18■□□□□ 0.18
CCDC188-201ENST00000439765 RCN3Q96D15 328 aa16.18■□□□□ 0.18
CCDC188-201ENST00000439765 RMND5BQ96G75 393 aaPredicted RBP16.18■□□□□ 0.18
CCDC188-201ENST00000439765 SLC35A4Q96G79 324 aa16.18■□□□□ 0.18
CCDC188-201ENST00000439765 SECISBP2Q96T21 854 aaKnown RBP16.18■□□□□ 0.18
CCDC188-201ENST00000439765 YIPF4Q9BSR8 244 aa16.18■□□□□ 0.18
CCDC188-201ENST00000439765 DEFB127Q9H1M4 99 aa16.18■□□□□ 0.18
CCDC188-201ENST00000439765 ZNF703Q9H7S9 590 aaPredicted RBP16.18■□□□□ 0.18
CCDC188-201ENST00000439765 NTMQ9P121 344 aa16.18■□□□□ 0.18
CCDC188-201ENST00000439765 CBLCQ9ULV8 474 aa16.18■□□□□ 0.18
CCDC188-201ENST00000439765 PRAMEF25A6NGN4 478 aa16.17■□□□□ 0.18
CCDC188-201ENST00000439765 MRASO14807 208 aa16.17■□□□□ 0.18
CCDC188-201ENST00000439765 AIM2O14862 343 aa16.17■□□□□ 0.18
CCDC188-201ENST00000439765 TSPAN2O60636 221 aa16.17■□□□□ 0.18
CCDC188-201ENST00000439765 SLC19A2O60779 497 aa16.17■□□□□ 0.18
CCDC188-201ENST00000439765 ABCB7O75027 752 aa16.17■□□□□ 0.18
CCDC188-201ENST00000439765 CPSF4O95639 269 aaKnown RBP16.17■□□□□ 0.18
CCDC188-201ENST00000439765 CELA3AP09093 270 aa16.17■□□□□ 0.18
CCDC188-201ENST00000439765 RFPL3SP0C7P2 107 aa16.17■□□□□ 0.18
CCDC188-201ENST00000439765 ACP2P11117 423 aa16.17■□□□□ 0.18
CCDC188-201ENST00000439765 GABRA3P34903 492 aa16.17■□□□□ 0.18
CCDC188-201ENST00000439765 CPA2P48052 419 aa16.17■□□□□ 0.18
CCDC188-201ENST00000439765 TRPC1P48995 793 aa16.17■□□□□ 0.18
CCDC188-201ENST00000439765 MNAT1P51948 309 aa16.17■□□□□ 0.18
CCDC188-201ENST00000439765 RBPJQ06330 500 aa16.17■□□□□ 0.18
CCDC188-201ENST00000439765 GAB1Q13480 694 aa16.17■□□□□ 0.18
CCDC188-201ENST00000439765 LASP1Q14847 261 aaKnown RBP16.17■□□□□ 0.18
CCDC188-201ENST00000439765 NUP54Q7Z3B4 507 aa16.17■□□□□ 0.18
CCDC188-201ENST00000439765 CDRT4Q8N9R6 151 aa16.17■□□□□ 0.18
CCDC188-201ENST00000439765 GOT1L1Q8NHS2 421 aaPredicted RBP16.17■□□□□ 0.18
CCDC188-201ENST00000439765 INPP5KQ9BT40 448 aa16.17■□□□□ 0.18
CCDC188-201ENST00000439765 OSBPL11Q9BXB4 747 aa16.17■□□□□ 0.18
CCDC188-201ENST00000439765 ANGPTL4Q9BY76 406 aa16.17■□□□□ 0.18
CCDC188-201ENST00000439765 ZDHHC11Q9H8X9 412 aa16.17■□□□□ 0.18
CCDC188-201ENST00000439765 ZFP64Q9NPA5 681 aa16.17■□□□□ 0.18
CCDC188-201ENST00000439765 PCDHGB4Q9UN71 923 aa16.17■□□□□ 0.18
CCDC188-201ENST00000439765 LIPGQ9Y5X9 500 aa16.17■□□□□ 0.18
CCDC188-201ENST00000439765 GXYLT2A0PJZ3 443 aa16.16■□□□□ 0.18
CCDC188-201ENST00000439765 ANKRD33BA6NCL7 494 aa16.16■□□□□ 0.18
CCDC188-201ENST00000439765 C2orf72A6NCS6 295 aa16.16■□□□□ 0.18
CCDC188-201ENST00000439765 RFXANKO14593 260 aa16.16■□□□□ 0.18
CCDC188-201ENST00000439765 TRIM3O75382 744 aaPredicted RBP16.16■□□□□ 0.18
CCDC188-201ENST00000439765 HMGN2P05204 90 aaKnown RBP16.16■□□□□ 0.18
CCDC188-201ENST00000439765 CCT3P49368 545 aaKnown RBP16.16■□□□□ 0.18
CCDC188-201ENST00000439765 PSPHP78330 225 aa16.16■□□□□ 0.18
CCDC188-201ENST00000439765 C6orf10Q5SRN2 563 aa16.16■□□□□ 0.18
CCDC188-201ENST00000439765 CCDC121Q6ZUS5 278 aa16.16■□□□□ 0.18
CCDC188-201ENST00000439765 GALNT10Q86SR1 603 aa16.16■□□□□ 0.18
CCDC188-201ENST00000439765 PACS2Q86VP3 889 aa16.16■□□□□ 0.18
CCDC188-201ENST00000439765 SLC16A11Q8NCK7 471 aa16.16■□□□□ 0.18
CCDC188-201ENST00000439765 OR4A15Q8NGL6 344 aa16.16■□□□□ 0.18
CCDC188-201ENST00000439765 PSMA8Q8TAA3 256 aa16.16■□□□□ 0.18
CCDC188-201ENST00000439765 C16orf58Q96GQ5 468 aa16.16■□□□□ 0.18
CCDC188-201ENST00000439765 PANX1Q96RD7 426 aa16.16■□□□□ 0.18
CCDC188-201ENST00000439765 PAIP1Q9H074 479 aaKnown RBP16.16■□□□□ 0.18
CCDC188-201ENST00000439765 SLAMF8Q9P0V8 285 aa16.16■□□□□ 0.18
CCDC188-201ENST00000439765 TINAGQ9UJW2 476 aa16.16■□□□□ 0.18
CCDC188-201ENST00000439765 LRBAP50851 2863 aa16.16■□□□□ 0.18
CCDC188-201ENST00000439765 A0A096LPI6 279 aa16.16■□□□□ 0.18
CCDC188-201ENST00000439765 TRGV8A0A0C4DH27 118 aa16.16■□□□□ 0.18
CCDC188-201ENST00000439765 A0A1B0GTH9 108 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms