RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 ZSCAN32Q9NX65 697 aa9.75□□□□□ -0.85
CLSTN1-203ENST00000435891 DNMT3AQ9Y6K1 912 aaPredicted RBP9.75□□□□□ -0.85
CLSTN1-203ENST00000435891 MEIOCA2RUB1 952 aa9.75□□□□□ -0.85
CLSTN1-203ENST00000435891 KCNJ13O60928 360 aa9.75□□□□□ -0.85
CLSTN1-203ENST00000435891 DNAJB6O75190 326 aa9.75□□□□□ -0.85
CLSTN1-203ENST00000435891 RAB36O95755 333 aa9.75□□□□□ -0.85
CLSTN1-203ENST00000435891 THY1P04216 161 aa9.75□□□□□ -0.85
CLSTN1-203ENST00000435891 SSTR4P31391 388 aa9.75□□□□□ -0.85
CLSTN1-203ENST00000435891 SDC2P34741 201 aa9.75□□□□□ -0.85
CLSTN1-203ENST00000435891 AVPR1BP47901 424 aa9.75□□□□□ -0.85
CLSTN1-203ENST00000435891 KRT33BQ14525 404 aa9.75□□□□□ -0.85
CLSTN1-203ENST00000435891 INSL4Q14641 139 aa9.75□□□□□ -0.85
CLSTN1-203ENST00000435891 ENTPD8Q5MY95 495 aa9.75□□□□□ -0.85
CLSTN1-203ENST00000435891 GARNL3Q5VVW2 1013 aa9.75□□□□□ -0.85
CLSTN1-203ENST00000435891 TMPRSS11AQ6ZMR5 421 aa9.75□□□□□ -0.85
CLSTN1-203ENST00000435891 NKAIN4Q8IVV8 208 aa9.75□□□□□ -0.85
CLSTN1-203ENST00000435891 BBS10Q8TAM1 723 aa9.75□□□□□ -0.85
CLSTN1-203ENST00000435891 ST6GAL2Q96JF0 529 aa9.75□□□□□ -0.85
CLSTN1-203ENST00000435891 C3orf14Q9HBI5 128 aa9.75□□□□□ -0.85
CLSTN1-203ENST00000435891 GLTPQ9NZD2 209 aa9.75□□□□□ -0.85
CLSTN1-203ENST00000435891 PLEKHB1Q9UF11 243 aaPredicted RBP9.75□□□□□ -0.85
CLSTN1-203ENST00000435891 A0A0G2JMP0 313 aa9.75□□□□□ -0.85
CLSTN1-203ENST00000435891 CFL1P23528 166 aaKnown RBP9.75□□□□□ -0.85
CLSTN1-203ENST00000435891 TAS2R41P59536 307 aa9.75□□□□□ -0.85
CLSTN1-203ENST00000435891 TRA2BP62995 288 aaKnown RBP9.75□□□□□ -0.85
CLSTN1-203ENST00000435891 COX10Q12887 443 aa9.75□□□□□ -0.85
CLSTN1-203ENST00000435891 GNA13Q14344 377 aa9.75□□□□□ -0.85
CLSTN1-203ENST00000435891 ZNF311Q5JNZ3 666 aa9.75□□□□□ -0.85
CLSTN1-203ENST00000435891 KIAA1211LQ6NV74 962 aa9.75□□□□□ -0.85
CLSTN1-203ENST00000435891 SLC30A6Q6NXT4 461 aa9.75□□□□□ -0.85
CLSTN1-203ENST00000435891 LHFPL3Q86UP9 236 aa9.75□□□□□ -0.85
CLSTN1-203ENST00000435891 CAMKK1Q8N5S9 505 aa9.75□□□□□ -0.85
CLSTN1-203ENST00000435891 OR2L8Q8NGY9 312 aa9.75□□□□□ -0.85
CLSTN1-203ENST00000435891 AKAP1Q92667 903 aaKnown RBP eCLIP9.75□□□□□ -0.852e-8■■■□□ 18
CLSTN1-203ENST00000435891 ARSGQ96EG1 525 aa9.75□□□□□ -0.85
CLSTN1-203ENST00000435891 RNFT2Q96EX2 444 aa9.75□□□□□ -0.85
CLSTN1-203ENST00000435891 FAIM2Q9BWQ8 316 aa9.75□□□□□ -0.85
CLSTN1-203ENST00000435891 DIABLOQ9NR28 239 aa9.75□□□□□ -0.85
CLSTN1-203ENST00000435891 TMEM74BQ9NUR3 256 aa9.75□□□□□ -0.85
CLSTN1-203ENST00000435891 SNX7Q9UNH6 387 aa9.75□□□□□ -0.85
CLSTN1-203ENST00000435891 SSR3Q9UNL2 185 aa9.75□□□□□ -0.85
CLSTN1-203ENST00000435891 FAM170BA6NMN3 283 aa9.74□□□□□ -0.85
CLSTN1-203ENST00000435891 F3P13726 295 aa9.74□□□□□ -0.85
CLSTN1-203ENST00000435891 RNF144AP50876 292 aaPredicted RBP9.74□□□□□ -0.85
CLSTN1-203ENST00000435891 RUNX3Q13761 415 aa9.74□□□□□ -0.85
CLSTN1-203ENST00000435891 C6orf132Q5T0Z8 1188 aa9.74□□□□□ -0.85
CLSTN1-203ENST00000435891 SLC48A1Q6P1K1 146 aa9.74□□□□□ -0.85
CLSTN1-203ENST00000435891 FAM111BQ6SJ93 734 aa9.74□□□□□ -0.85
CLSTN1-203ENST00000435891 ARSKQ6UWY0 536 aa9.74□□□□□ -0.85
CLSTN1-203ENST00000435891 UBQLNLQ8IYU4 475 aa9.74□□□□□ -0.85
CLSTN1-203ENST00000435891 RIT1Q92963 219 aa9.74□□□□□ -0.85
CLSTN1-203ENST00000435891 SLC25A46Q96AG3 418 aa9.74□□□□□ -0.85
CLSTN1-203ENST00000435891 GFM1Q96RP9 751 aaKnown RBP9.74□□□□□ -0.85
CLSTN1-203ENST00000435891 CCDC32Q9BV29 185 aa9.74□□□□□ -0.85
CLSTN1-203ENST00000435891 PITHD1Q9GZP4 211 aaPredicted RBP9.74□□□□□ -0.85
CLSTN1-203ENST00000435891 SRRQ9GZT4 340 aa9.74□□□□□ -0.85
CLSTN1-203ENST00000435891 NUP50Q9UKX7 468 aa9.74□□□□□ -0.85
CLSTN1-203ENST00000435891 SF3B6Q9Y3B4 125 aaKnown RBP9.74□□□□□ -0.85
CLSTN1-203ENST00000435891 MN1Q10571 1320 aaPredicted RBP9.74□□□□□ -0.85
CLSTN1-203ENST00000435891 CENPVL1A0A0U1RR11 272 aa9.74□□□□□ -0.85
CLSTN1-203ENST00000435891 A0A1W2PQ09 198 aa9.74□□□□□ -0.85
CLSTN1-203ENST00000435891 SMLR1H3BR10 107 aa9.74□□□□□ -0.85
CLSTN1-203ENST00000435891 CACNB4O00305 520 aaPredicted RBP9.74□□□□□ -0.85
CLSTN1-203ENST00000435891 LIMS3P0CW19 117 aa9.74□□□□□ -0.85
CLSTN1-203ENST00000435891 LIMS4P0CW20 117 aa9.74□□□□□ -0.85
CLSTN1-203ENST00000435891 ICAM2P13598 275 aa9.74□□□□□ -0.85
CLSTN1-203ENST00000435891 CPEP16870 476 aa9.74□□□□□ -0.85
CLSTN1-203ENST00000435891 NAGAP17050 411 aa9.74□□□□□ -0.85
CLSTN1-203ENST00000435891 TIE1P35590 1138 aa9.74□□□□□ -0.85
CLSTN1-203ENST00000435891 PDX1P52945 283 aa9.74□□□□□ -0.85
CLSTN1-203ENST00000435891 SEC13P55735 322 aa9.74□□□□□ -0.85
CLSTN1-203ENST00000435891 C1DQ13901 141 aaKnown RBP9.74□□□□□ -0.85
CLSTN1-203ENST00000435891 LRRC32Q14392 662 aa9.74□□□□□ -0.85
CLSTN1-203ENST00000435891 PAMR1Q6UXH9 720 aa9.74□□□□□ -0.85
CLSTN1-203ENST00000435891 B3GLCTQ6Y288 498 aa9.74□□□□□ -0.85
CLSTN1-203ENST00000435891 SLC16A11Q8NCK7 471 aa9.74□□□□□ -0.85
CLSTN1-203ENST00000435891 NUP43Q8NFH3 380 aa9.74□□□□□ -0.85
CLSTN1-203ENST00000435891 OR2L5Q8NG80 312 aa9.74□□□□□ -0.85
CLSTN1-203ENST00000435891 OR4F15Q8NGB8 312 aa9.74□□□□□ -0.85
CLSTN1-203ENST00000435891 DIO2Q92813 273 aa9.74□□□□□ -0.85
CLSTN1-203ENST00000435891 PHF21AQ96BD5 680 aa9.74□□□□□ -0.85
CLSTN1-203ENST00000435891 ELP4Q96EB1 424 aa9.74□□□□□ -0.85
CLSTN1-203ENST00000435891 ZNF681Q96N22 645 aa9.74□□□□□ -0.85
CLSTN1-203ENST00000435891 EVA1BQ9NVM1 165 aa9.74□□□□□ -0.85
CLSTN1-203ENST00000435891 TRAPPC4Q9Y296 219 aa9.74□□□□□ -0.85
CLSTN1-203ENST00000435891 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.74□□□□□ -0.85
CLSTN1-203ENST00000435891 CIB4A0PJX0 185 aa9.74□□□□□ -0.85
CLSTN1-203ENST00000435891 PIP5K1CO60331 668 aa9.74□□□□□ -0.85
CLSTN1-203ENST00000435891 SLC2A10O95528 541 aa9.74□□□□□ -0.85
CLSTN1-203ENST00000435891 GNSP15586 552 aa9.74□□□□□ -0.85
CLSTN1-203ENST00000435891 GPR4P46093 362 aa9.74□□□□□ -0.85
CLSTN1-203ENST00000435891 SMSP52788 366 aa9.74□□□□□ -0.85
CLSTN1-203ENST00000435891 WNT4P56705 351 aa9.74□□□□□ -0.85
CLSTN1-203ENST00000435891 BTN1A1Q13410 526 aa9.74□□□□□ -0.85
CLSTN1-203ENST00000435891 RNLSQ5VYX0 342 aa9.74□□□□□ -0.85
CLSTN1-203ENST00000435891 SLC27A4Q6P1M0 643 aa9.74□□□□□ -0.85
CLSTN1-203ENST00000435891 TMEM64Q6YI46 380 aa9.74□□□□□ -0.85
CLSTN1-203ENST00000435891 GDPGP1Q6ZNW5 385 aa9.74□□□□□ -0.85
CLSTN1-203ENST00000435891 OR4N5Q8IXE1 308 aa9.74□□□□□ -0.85
CLSTN1-203ENST00000435891 TIGD4Q8IY51 512 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms