RNA–Protein interactions for RNA: ENST00000433949.7

CTCFL-209, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-209ENST00000433949 KRCC1Q9NPI7 259 aaPredicted RBP11.13□□□□□ -0.63
CTCFL-209ENST00000433949 FBXO8Q9NRD0 319 aa11.13□□□□□ -0.63
CTCFL-209ENST00000433949 ZNF318Q5VUA4 2279 aa11.13□□□□□ -0.63
CTCFL-209ENST00000433949 A0A087WUU8 490 aa11.13□□□□□ -0.63
CTCFL-209ENST00000433949 M0R129 80 aa11.13□□□□□ -0.63
CTCFL-209ENST00000433949 OR5F1O95221 314 aa11.13□□□□□ -0.63
CTCFL-209ENST00000433949 ALOX5P09917 674 aa11.13□□□□□ -0.63
CTCFL-209ENST00000433949 PVRP15151 417 aa11.13□□□□□ -0.63
CTCFL-209ENST00000433949 MPLP40238 635 aa11.13□□□□□ -0.63
CTCFL-209ENST00000433949 PCYT1AP49585 367 aa11.13□□□□□ -0.63
CTCFL-209ENST00000433949 RAB38P57729 211 aa11.13□□□□□ -0.63
CTCFL-209ENST00000433949 NCS1P62166 190 aa11.13□□□□□ -0.63
CTCFL-209ENST00000433949 CDK5Q00535 292 aa11.13□□□□□ -0.63
CTCFL-209ENST00000433949 RHAGQ02094 409 aa11.13□□□□□ -0.63
CTCFL-209ENST00000433949 TSPAN31Q12999 210 aa11.13□□□□□ -0.63
CTCFL-209ENST00000433949 COL9A2Q14055 689 aaPredicted RBP11.13□□□□□ -0.63
CTCFL-209ENST00000433949 DECR1Q16698 335 aa11.13□□□□□ -0.63
CTCFL-209ENST00000433949 ARMCX4Q5H9R4 360 aa11.13□□□□□ -0.63
CTCFL-209ENST00000433949 FHL5Q5TD97 284 aa11.13□□□□□ -0.63
CTCFL-209ENST00000433949 TYW3Q6IPR3 259 aaKnown RBP11.13□□□□□ -0.63
CTCFL-209ENST00000433949 PRR23CQ6ZRP0 262 aa11.13□□□□□ -0.63
CTCFL-209ENST00000433949 USP43Q70EL4 1123 aa11.13□□□□□ -0.63
CTCFL-209ENST00000433949 KBTBD8Q8NFY9 601 aa11.13□□□□□ -0.63
CTCFL-209ENST00000433949 TEX47Q8TBZ9 253 aa11.13□□□□□ -0.63
CTCFL-209ENST00000433949 IL4I1Q96RQ9 567 aa11.13□□□□□ -0.63
CTCFL-209ENST00000433949 LRFN3Q9BTN0 628 aa11.13□□□□□ -0.63
CTCFL-209ENST00000433949 TEX12Q9BXU0 123 aa11.13□□□□□ -0.63
CTCFL-209ENST00000433949 KLHL25Q9H0H3 589 aa11.13□□□□□ -0.63
CTCFL-209ENST00000433949 ANKRA2Q9H9E1 313 aa11.13□□□□□ -0.63
CTCFL-209ENST00000433949 FAM86C1Q9NVL1 165 aa11.13□□□□□ -0.63
CTCFL-209ENST00000433949 ERGIC3Q9Y282 383 aa11.13□□□□□ -0.63
CTCFL-209ENST00000433949 ZNF443Q9Y2A4 671 aaPredicted RBP11.13□□□□□ -0.63
CTCFL-209ENST00000433949 A3GALT2U3KPV4 340 aa11.13□□□□□ -0.63
CTCFL-209ENST00000433949 IRGMA1A4Y4 181 aa11.12□□□□□ -0.63
CTCFL-209ENST00000433949 BLACEA4D250 179 aa11.12□□□□□ -0.63
CTCFL-209ENST00000433949 FCMRO60667 390 aa11.12□□□□□ -0.63
CTCFL-209ENST00000433949 ENTPD6O75354 484 aa11.12□□□□□ -0.63
CTCFL-209ENST00000433949 STX11O75558 287 aa11.12□□□□□ -0.63
CTCFL-209ENST00000433949 PTHP01270 115 aa11.12□□□□□ -0.63
CTCFL-209ENST00000433949 TYRP1P17643 537 aa11.12□□□□□ -0.63
CTCFL-209ENST00000433949 RGS6P49758 472 aa11.12□□□□□ -0.63
CTCFL-209ENST00000433949 LSM3P62310 102 aaKnown RBP11.12□□□□□ -0.63
CTCFL-209ENST00000433949 DUSP5Q16690 384 aa11.12□□□□□ -0.63
CTCFL-209ENST00000433949 EXOSC6Q5RKV6 272 aaKnown RBP11.12□□□□□ -0.63
CTCFL-209ENST00000433949 ZC3H14Q6PJT7 736 aaKnown RBP11.12□□□□□ -0.63
CTCFL-209ENST00000433949 ZNF730Q6ZMV8 503 aa11.12□□□□□ -0.63
CTCFL-209ENST00000433949 OR4N5Q8IXE1 308 aa11.12□□□□□ -0.63
CTCFL-209ENST00000433949 SLC15A4Q8N697 577 aa11.12□□□□□ -0.63
CTCFL-209ENST00000433949 PIGXQ8TBF5 258 aa11.12□□□□□ -0.63
CTCFL-209ENST00000433949 ACOT11Q8WXI4 607 aaPredicted RBP11.12□□□□□ -0.63
CTCFL-209ENST00000433949 ZG16BQ96DA0 208 aa11.12□□□□□ -0.63
CTCFL-209ENST00000433949 TMEM80Q96HE8 168 aa11.12□□□□□ -0.63
CTCFL-209ENST00000433949 SDF2Q99470 211 aa11.12□□□□□ -0.63
CTCFL-209ENST00000433949 ZNF350Q9GZX5 532 aa11.12□□□□□ -0.63
CTCFL-209ENST00000433949 SAP130Q9H0E3 1048 aa11.12□□□□□ -0.63
CTCFL-209ENST00000433949 ARMC7Q9H6L4 198 aa11.12□□□□□ -0.63
CTCFL-209ENST00000433949 POLE3Q9NRF9 147 aa11.12□□□□□ -0.63
CTCFL-209ENST00000433949 OSGIN1Q9UJX0 560 aa11.12□□□□□ -0.63
CTCFL-209ENST00000433949 MKLN1Q9UL63 735 aa11.12□□□□□ -0.63
CTCFL-209ENST00000433949 SLC6A14Q9UN76 642 aa11.12□□□□□ -0.63
CTCFL-209ENST00000433949 EP300Q09472 2414 aaPredicted RBP11.12□□□□□ -0.63
CTCFL-209ENST00000433949 ZNF860A6NHJ4 632 aa11.12□□□□□ -0.63
CTCFL-209ENST00000433949 AGAP5A6NIR3 686 aa11.12□□□□□ -0.63
CTCFL-209ENST00000433949 LMO7DNF2Z398 122 aa11.12□□□□□ -0.63
CTCFL-209ENST00000433949 FGF17O60258 216 aa11.12□□□□□ -0.63
CTCFL-209ENST00000433949 SRPX2O60687 465 aaPredicted RBP11.12□□□□□ -0.63
CTCFL-209ENST00000433949 DBIP07108 87 aaKnown RBP11.12□□□□□ -0.63
CTCFL-209ENST00000433949 CSTF2P33240 577 aaKnown RBP eCLIP11.12□□□□□ -0.63
CTCFL-209ENST00000433949 AVPR1BP47901 424 aa11.12□□□□□ -0.63
CTCFL-209ENST00000433949 FASLGP48023 281 aa11.12□□□□□ -0.63
CTCFL-209ENST00000433949 MLLT10P55197 1068 aa11.12□□□□□ -0.63
CTCFL-209ENST00000433949 VSX2P58304 361 aaPredicted RBP11.12□□□□□ -0.63
CTCFL-209ENST00000433949 SNRPNP63162 240 aaKnown RBP11.12□□□□□ -0.63
CTCFL-209ENST00000433949 SHC2P98077 582 aa11.12□□□□□ -0.63
CTCFL-209ENST00000433949 GINS1Q14691 196 aa11.12□□□□□ -0.63
CTCFL-209ENST00000433949 PRICKLE4Q2TBC4 344 aa11.12□□□□□ -0.63
CTCFL-209ENST00000433949 SLC27A4Q6P1M0 643 aa11.12□□□□□ -0.63
CTCFL-209ENST00000433949 RASSF6Q6ZTQ3 369 aa11.12□□□□□ -0.63
CTCFL-209ENST00000433949 PLEKHM3Q6ZWE6 761 aa11.12□□□□□ -0.63
CTCFL-209ENST00000433949 RANBP3LQ86VV4 465 aaPredicted RBP11.12□□□□□ -0.63
CTCFL-209ENST00000433949 CA13Q8N1Q1 262 aa11.12□□□□□ -0.63
CTCFL-209ENST00000433949 ZNF619Q8N2I2 560 aa11.12□□□□□ -0.63
CTCFL-209ENST00000433949 ARL14Q8N4G2 192 aa11.12□□□□□ -0.63
CTCFL-209ENST00000433949 AMER2Q8N7J2 671 aa11.12□□□□□ -0.63
CTCFL-209ENST00000433949 TCEANCQ8N8B7 351 aa11.12□□□□□ -0.63
CTCFL-209ENST00000433949 SLC38A2Q96QD8 506 aa11.12□□□□□ -0.63
CTCFL-209ENST00000433949 MGLLQ99685 303 aa11.12□□□□□ -0.63
CTCFL-209ENST00000433949 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.12□□□□□ -0.63
CTCFL-209ENST00000433949 DCSTAMPQ9H295 470 aa11.12□□□□□ -0.63
CTCFL-209ENST00000433949 UCK1Q9HA47 277 aa11.12□□□□□ -0.63
CTCFL-209ENST00000433949 CLCA2Q9UQC9 943 aa11.12□□□□□ -0.63
CTCFL-209ENST00000433949 MRPS2Q9Y399 296 aaKnown RBP11.12□□□□□ -0.63
CTCFL-209ENST00000433949 CHST2Q9Y4C5 530 aa11.12□□□□□ -0.63
CTCFL-209ENST00000433949 ADAMTS9Q9P2N4 1935 aa11.11□□□□□ -0.63
CTCFL-209ENST00000433949 CPSF4LA6NMK7 179 aaKnown RBP11.11□□□□□ -0.63
CTCFL-209ENST00000433949 CCRL2O00421 344 aa11.11□□□□□ -0.63
CTCFL-209ENST00000433949 LDB3O75112 727 aa11.11□□□□□ -0.63
CTCFL-209ENST00000433949 COQ9O75208 318 aa11.11□□□□□ -0.63
CTCFL-209ENST00000433949 ZIC2O95409 532 aaPredicted RBP11.11□□□□□ -0.63
CTCFL-209ENST00000433949 ACP2P11117 423 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms