RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 ADAM12O43184 909 aa10.84□□□□□ -0.67
HMGCS1-202ENST00000433297 REM1O75628 298 aa10.84□□□□□ -0.67
HMGCS1-202ENST00000433297 UBXN7O94888 489 aa10.84□□□□□ -0.67
HMGCS1-202ENST00000433297 MRPL3P09001 348 aaKnown RBP10.84□□□□□ -0.67
HMGCS1-202ENST00000433297 CXCL2P19875 107 aa10.84□□□□□ -0.67
HMGCS1-202ENST00000433297 NPR2P20594 1047 aa10.84□□□□□ -0.67
HMGCS1-202ENST00000433297 RPL3P39023 403 aaKnown RBP10.84□□□□□ -0.67
HMGCS1-202ENST00000433297 RFX3P48380 749 aa10.84□□□□□ -0.67
HMGCS1-202ENST00000433297 STXBP1P61764 594 aaKnown RBP10.84□□□□□ -0.67
HMGCS1-202ENST00000433297 BAMBIQ13145 260 aa10.84□□□□□ -0.67
HMGCS1-202ENST00000433297 FGL2Q14314 439 aa10.84□□□□□ -0.67
HMGCS1-202ENST00000433297 SHEQ5VZ18 495 aa10.84□□□□□ -0.67
HMGCS1-202ENST00000433297 VASNQ6EMK4 673 aa10.84□□□□□ -0.67
HMGCS1-202ENST00000433297 ZNF322Q6U7Q0 402 aaPredicted RBP10.84□□□□□ -0.67
HMGCS1-202ENST00000433297 Q6ZVL8 140 aa10.84□□□□□ -0.67
HMGCS1-202ENST00000433297 CPOQ8IVL8 374 aa10.84□□□□□ -0.67
HMGCS1-202ENST00000433297 TTLQ8NG68 377 aa10.84□□□□□ -0.67
HMGCS1-202ENST00000433297 OR4D9Q8NGE8 314 aa10.84□□□□□ -0.67
HMGCS1-202ENST00000433297 YIPF5Q969M3 257 aa10.84□□□□□ -0.67
HMGCS1-202ENST00000433297 REG4Q9BYZ8 158 aa10.84□□□□□ -0.67
HMGCS1-202ENST00000433297 AUNIPQ9H7T9 357 aa10.84□□□□□ -0.67
HMGCS1-202ENST00000433297 B4GALT6Q9UBX8 382 aa10.84□□□□□ -0.67
HMGCS1-202ENST00000433297 ACSL5Q9ULC5 683 aa10.84□□□□□ -0.67
HMGCS1-202ENST00000433297 STON1Q9Y6Q2 735 aa10.84□□□□□ -0.67
HMGCS1-202ENST00000433297 A0A1W2PRQ8 180 aa10.83□□□□□ -0.67
HMGCS1-202ENST00000433297 MFSD2BA6NFX1 497 aa10.83□□□□□ -0.67
HMGCS1-202ENST00000433297 RB1P06400 928 aa10.83□□□□□ -0.67
HMGCS1-202ENST00000433297 DRD2P14416 443 aa10.83□□□□□ -0.67
HMGCS1-202ENST00000433297 CTSOP43234 321 aaPredicted RBP10.83□□□□□ -0.67
HMGCS1-202ENST00000433297 CTAG1AP78358 180 aa10.83□□□□□ -0.67
HMGCS1-202ENST00000433297 CDC73Q6P1J9 531 aa10.83□□□□□ -0.67
HMGCS1-202ENST00000433297 ZNF613Q6PF04 617 aa10.83□□□□□ -0.67
HMGCS1-202ENST00000433297 RPTNQ6XPR3 784 aa10.83□□□□□ -0.67
HMGCS1-202ENST00000433297 TAS1R1Q7RTX1 841 aa10.83□□□□□ -0.67
HMGCS1-202ENST00000433297 SERINC5Q86VE9 423 aa10.83□□□□□ -0.67
HMGCS1-202ENST00000433297 ASB12Q8WXK4 309 aa10.83□□□□□ -0.67
HMGCS1-202ENST00000433297 NARS2Q96I59 477 aaKnown RBP10.83□□□□□ -0.67
HMGCS1-202ENST00000433297 C20orf85Q9H1P6 137 aa10.83□□□□□ -0.67
HMGCS1-202ENST00000433297 SLC35C2Q9NQQ7 365 aa10.83□□□□□ -0.67
HMGCS1-202ENST00000433297 RPS6KB2Q9UBS0 482 aa10.83□□□□□ -0.67
HMGCS1-202ENST00000433297 OR6C75A6NL08 312 aa10.83□□□□□ -0.68
HMGCS1-202ENST00000433297 HOXD10P28358 340 aa10.83□□□□□ -0.68
HMGCS1-202ENST00000433297 MAPK9P45984 424 aa10.83□□□□□ -0.68
HMGCS1-202ENST00000433297 GATMP50440 423 aa10.83□□□□□ -0.68
HMGCS1-202ENST00000433297 CTSCP53634 463 aa10.83□□□□□ -0.68
HMGCS1-202ENST00000433297 NDUFA9Q16795 377 aa10.83□□□□□ -0.68
HMGCS1-202ENST00000433297 NHLRC3Q5JS37 347 aa10.83□□□□□ -0.68
HMGCS1-202ENST00000433297 PIP5KL1Q5T9C9 394 aa10.83□□□□□ -0.68
HMGCS1-202ENST00000433297 C1orf94Q6P1W5 598 aa10.83□□□□□ -0.68
HMGCS1-202ENST00000433297 SIRT6Q8N6T7 355 aa10.83□□□□□ -0.68
HMGCS1-202ENST00000433297 OR13C5Q8NGS8 318 aa10.83□□□□□ -0.68
HMGCS1-202ENST00000433297 OR56B4Q8NH76 319 aa10.83□□□□□ -0.68
HMGCS1-202ENST00000433297 ZNF671Q8TAW3 534 aa10.83□□□□□ -0.68
HMGCS1-202ENST00000433297 ZNF480Q8WV37 535 aa10.83□□□□□ -0.68
HMGCS1-202ENST00000433297 PLD4Q96BZ4 506 aa10.83□□□□□ -0.68
HMGCS1-202ENST00000433297 C11orf49Q9H6J7 331 aa10.83□□□□□ -0.68
HMGCS1-202ENST00000433297 WDR26Q9H7D7 661 aa10.83□□□□□ -0.68
HMGCS1-202ENST00000433297 TEX10Q9NXF1 929 aaPredicted RBP10.83□□□□□ -0.68
HMGCS1-202ENST00000433297 KIF25Q9UIL4 384 aa10.83□□□□□ -0.68
HMGCS1-202ENST00000433297 SLC13A4Q9UKG4 626 aa10.83□□□□□ -0.68
HMGCS1-202ENST00000433297 DAPL1A0PJW8 107 aa10.83□□□□□ -0.68
HMGCS1-202ENST00000433297 AGAP14A8MT82 685 aa10.83□□□□□ -0.68
HMGCS1-202ENST00000433297 ARPC1BO15143 372 aaKnown RBP10.83□□□□□ -0.68
HMGCS1-202ENST00000433297 GMDSO60547 372 aa10.83□□□□□ -0.68
HMGCS1-202ENST00000433297 B4GALT2O60909 372 aa10.83□□□□□ -0.68
HMGCS1-202ENST00000433297 CBX7O95931 251 aa10.83□□□□□ -0.68
HMGCS1-202ENST00000433297 SERPIND1P05546 499 aa10.83□□□□□ -0.68
HMGCS1-202ENST00000433297 C4BPBP20851 252 aa10.83□□□□□ -0.68
HMGCS1-202ENST00000433297 CCND3P30281 292 aaPredicted RBP10.83□□□□□ -0.68
HMGCS1-202ENST00000433297 SPINT3P49223 89 aa10.83□□□□□ -0.68
HMGCS1-202ENST00000433297 MTNR1BP49286 362 aa10.83□□□□□ -0.68
HMGCS1-202ENST00000433297 FAAP20Q6NZ36 180 aa10.83□□□□□ -0.68
HMGCS1-202ENST00000433297 PLBD1Q6P4A8 553 aa10.83□□□□□ -0.68
HMGCS1-202ENST00000433297 BTN2A1Q7KYR7 527 aa10.83□□□□□ -0.68
HMGCS1-202ENST00000433297 LINGO2Q7L985 606 aa10.83□□□□□ -0.68
HMGCS1-202ENST00000433297 ZNF485Q8NCK3 441 aa10.83□□□□□ -0.68
HMGCS1-202ENST00000433297 THAP4Q8WY91 577 aa10.83□□□□□ -0.68
HMGCS1-202ENST00000433297 ALG8Q9BVK2 526 aa10.83□□□□□ -0.68
HMGCS1-202ENST00000433297 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.83□□□□□ -0.685e-6■□□□□ 10.4
HMGCS1-202ENST00000433297 MAN2C1Q9NTJ4 1040 aa10.83□□□□□ -0.68
HMGCS1-202ENST00000433297 RCE1Q9Y256 329 aa10.83□□□□□ -0.68
HMGCS1-202ENST00000433297 ANXA2P2A6NMY6 339 aa10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 KRBOX1C9JBD0 128 aa10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 E9PI62 339 aa10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 SYN3O14994 580 aa10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 PI15O43692 258 aa10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 NPPBP16860 134 aa10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 PPP2R1BP30154 601 aa10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 PSMA6P60900 246 aaKnown RBP10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 SIM1P81133 766 aaPredicted RBP10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 MAP2K5Q13163 448 aa10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 PDE7AQ13946 482 aa10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 RTN4RL1Q86UN2 441 aaPredicted RBP10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 DCAF4L2Q8NA75 395 aa10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 OR2AP1Q8NGE2 309 aa10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 LILRB1Q8NHL6 650 aaPredicted RBP10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 TMEM169Q96HH4 297 aa10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 SLC22A12Q96S37 553 aa10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 TEX12Q9BXU0 123 aa10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 ARL6Q9H0F7 186 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms