RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 PIK3R3Q92569 461 aa15.97■□□□□ 0.15
NUP50-208ENST00000430547 JADE3Q92613 823 aa15.97■□□□□ 0.15
NUP50-208ENST00000430547 CHMP6Q96FZ7 201 aa15.97■□□□□ 0.15
NUP50-208ENST00000430547 C3orf30Q96M34 536 aa15.97■□□□□ 0.15
NUP50-208ENST00000430547 PRPF18Q99633 342 aaKnown RBP15.97■□□□□ 0.15
NUP50-208ENST00000430547 ZNF559Q9BR84 538 aa15.97■□□□□ 0.15
NUP50-208ENST00000430547 DSN1Q9H410 356 aa15.97■□□□□ 0.15
NUP50-208ENST00000430547 CALHM2Q9HA72 323 aa15.97■□□□□ 0.15
NUP50-208ENST00000430547 MCCC2Q9HCC0 563 aa15.97■□□□□ 0.15
NUP50-208ENST00000430547 KCNK9Q9NPC2 374 aa15.97■□□□□ 0.15
NUP50-208ENST00000430547 ZNF629Q9UEG4 869 aaPredicted RBP15.97■□□□□ 0.15
NUP50-208ENST00000430547 ATP6V1HQ9UI12 483 aa15.97■□□□□ 0.15
NUP50-208ENST00000430547 EIF3LQ9Y262 564 aaKnown RBP15.97■□□□□ 0.15
NUP50-208ENST00000430547 TACC2O95359 2948 aa15.96■□□□□ 0.15
NUP50-208ENST00000430547 PCNX3Q9H6A9 2034 aa15.96■□□□□ 0.15
NUP50-208ENST00000430547 A0A1W2PRB8 838 aa15.96■□□□□ 0.15
NUP50-208ENST00000430547 GXYLT2A0PJZ3 443 aa15.96■□□□□ 0.15
NUP50-208ENST00000430547 MBD3L4A6NDZ8 208 aaPredicted RBP15.96■□□□□ 0.15
NUP50-208ENST00000430547 MBD3L3A6NE82 208 aaPredicted RBP15.96■□□□□ 0.15
NUP50-208ENST00000430547 MBD3L5A6NJ08 208 aaPredicted RBP15.96■□□□□ 0.15
NUP50-208ENST00000430547 KDM4EB2RXH2 506 aaPredicted RBP15.96■□□□□ 0.15
NUP50-208ENST00000430547 FADS1O60427 444 aa15.96■□□□□ 0.15
NUP50-208ENST00000430547 SNUPNO95149 360 aaKnown RBP15.96■□□□□ 0.15
NUP50-208ENST00000430547 ZWINTO95229 277 aa15.96■□□□□ 0.15
NUP50-208ENST00000430547 UTS2O95399 124 aa15.96■□□□□ 0.15
NUP50-208ENST00000430547 CHMP24386 653 aa15.96■□□□□ 0.15
NUP50-208ENST00000430547 UQCRC1P31930 480 aa15.96■□□□□ 0.15
NUP50-208ENST00000430547 PRIM2P49643 509 aa15.96■□□□□ 0.15
NUP50-208ENST00000430547 ASCL1P50553 236 aa15.96■□□□□ 0.15
NUP50-208ENST00000430547 DGKQP52824 942 aa15.96■□□□□ 0.15
NUP50-208ENST00000430547 GFRA1P56159 465 aa15.96■□□□□ 0.15
NUP50-208ENST00000430547 GANABQ14697 944 aaKnown RBP15.96■□□□□ 0.15
NUP50-208ENST00000430547 PDCD2Q16342 344 aaPredicted RBP15.96■□□□□ 0.15
NUP50-208ENST00000430547 CPTPQ5TA50 214 aa15.96■□□□□ 0.15
NUP50-208ENST00000430547 RAET1LQ5VY80 246 aa15.96■□□□□ 0.15
NUP50-208ENST00000430547 NATD1Q8N6N6 113 aa15.96■□□□□ 0.15
NUP50-208ENST00000430547 NAXEQ8NCW5 288 aa15.96■□□□□ 0.15
NUP50-208ENST00000430547 OR7A2PQ8NGA2 310 aa15.96■□□□□ 0.15
NUP50-208ENST00000430547 OR6Y1Q8NGX8 325 aa15.96■□□□□ 0.15
NUP50-208ENST00000430547 MBD3L2Q8NHZ7 208 aaPredicted RBP15.96■□□□□ 0.15
NUP50-208ENST00000430547 ZIM3Q96PE6 472 aa15.96■□□□□ 0.15
NUP50-208ENST00000430547 ZCCHC3Q9NUD5 404 aaKnown RBP15.96■□□□□ 0.15
NUP50-208ENST00000430547 FLRT3Q9NZU0 649 aa15.96■□□□□ 0.15
NUP50-208ENST00000430547 KCNN3Q9UGI6 736 aa15.96■□□□□ 0.15
NUP50-208ENST00000430547 SNX8Q9Y5X2 465 aa15.96■□□□□ 0.15
NUP50-208ENST00000430547 NUP214P35658 2090 aaPredicted RBP15.96■□□□□ 0.15
NUP50-208ENST00000430547 NKX2-2O95096 273 aa15.95■□□□□ 0.14
NUP50-208ENST00000430547 ALOX5P09917 674 aa15.95■□□□□ 0.14
NUP50-208ENST00000430547 HK1P19367 917 aa15.95■□□□□ 0.14
NUP50-208ENST00000430547 CAPN3P20807 821 aa15.95■□□□□ 0.14
NUP50-208ENST00000430547 PRPS1L1P21108 318 aa15.95■□□□□ 0.14
NUP50-208ENST00000430547 PEX19P40855 299 aa15.95■□□□□ 0.14
NUP50-208ENST00000430547 ABCE1P61221 599 aaKnown RBP15.95■□□□□ 0.14
NUP50-208ENST00000430547 MLC1Q15049 377 aa15.95■□□□□ 0.14
NUP50-208ENST00000430547 CES4AQ5XG92 561 aa15.95■□□□□ 0.14
NUP50-208ENST00000430547 MFSD12Q6NUT3 480 aa15.95■□□□□ 0.14
NUP50-208ENST00000430547 ZCCHC12Q6PEW1 402 aa15.95■□□□□ 0.14
NUP50-208ENST00000430547 CHMP1BQ7LBR1 199 aa15.95■□□□□ 0.14
NUP50-208ENST00000430547 MARCH3Q86UD3 253 aa15.95■□□□□ 0.14
NUP50-208ENST00000430547 KIRREL3Q8IZU9 778 aa15.95■□□□□ 0.14
NUP50-208ENST00000430547 COX18Q8N8Q8 333 aa15.95■□□□□ 0.14
NUP50-208ENST00000430547 RELL2Q8NC24 303 aaPredicted RBP15.95■□□□□ 0.14
NUP50-208ENST00000430547 OR2M3Q8NG83 312 aa15.95■□□□□ 0.14
NUP50-208ENST00000430547 PPP1R36Q96LQ0 422 aa15.95■□□□□ 0.14
NUP50-208ENST00000430547 TUBA1CQ9BQE3 449 aa15.95■□□□□ 0.14
NUP50-208ENST00000430547 HHATLQ9HCP6 504 aa15.95■□□□□ 0.14
NUP50-208ENST00000430547 NOP53Q9NZM5 478 aaKnown RBP15.95■□□□□ 0.14
NUP50-208ENST00000430547 MED11Q9P086 117 aa15.95■□□□□ 0.14
NUP50-208ENST00000430547 NTMQ9P121 344 aa15.95■□□□□ 0.14
NUP50-208ENST00000430547 ACTL7BQ9Y614 415 aa15.95■□□□□ 0.14
NUP50-208ENST00000430547 MED12LQ86YW9 2145 aa15.95■□□□□ 0.14
NUP50-208ENST00000430547 ANKRD17O75179 2603 aaKnown RBP15.95■□□□□ 0.14
NUP50-208ENST00000430547 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.94■□□□□ 0.14
NUP50-208ENST00000430547 C17orf51A8MQB3 221 aa15.94■□□□□ 0.14
NUP50-208ENST00000430547 ITM2AO43736 263 aa15.94■□□□□ 0.14
NUP50-208ENST00000430547 ANGPTL1O95841 491 aa15.94■□□□□ 0.14
NUP50-208ENST00000430547 TMIGD3P0DMS9 266 aaPredicted RBP15.94■□□□□ 0.14
NUP50-208ENST00000430547 ACP2P11117 423 aa15.94■□□□□ 0.14
NUP50-208ENST00000430547 LAMP1P11279 417 aa15.94■□□□□ 0.14
NUP50-208ENST00000430547 HPGDP15428 266 aa15.94■□□□□ 0.14
NUP50-208ENST00000430547 CTSSP25774 331 aa15.94■□□□□ 0.14
NUP50-208ENST00000430547 OPRM1P35372 400 aa15.94■□□□□ 0.14
NUP50-208ENST00000430547 STARP49675 285 aa15.94■□□□□ 0.14
NUP50-208ENST00000430547 LHX2P50458 406 aa15.94■□□□□ 0.14
NUP50-208ENST00000430547 ZNF136P52737 540 aa15.94■□□□□ 0.14
NUP50-208ENST00000430547 C17orf67Q0P5P2 114 aa15.94■□□□□ 0.14
NUP50-208ENST00000430547 GRAMD1BQ3KR37 738 aa15.94■□□□□ 0.14
NUP50-208ENST00000430547 LSM12Q3MHD2 195 aaKnown RBP15.94■□□□□ 0.14
NUP50-208ENST00000430547 SPDYE7PQ495Y7 208 aa15.94■□□□□ 0.14
NUP50-208ENST00000430547 ARSKQ6UWY0 536 aa15.94■□□□□ 0.14
NUP50-208ENST00000430547 GALNT10Q86SR1 603 aa15.94■□□□□ 0.14
NUP50-208ENST00000430547 TMEM200AQ86VY9 491 aa15.94■□□□□ 0.14
NUP50-208ENST00000430547 ZNF781Q8N8C0 355 aa15.94■□□□□ 0.14
NUP50-208ENST00000430547 FADS6Q8N9I5 356 aa15.94■□□□□ 0.14
NUP50-208ENST00000430547 SLC16A11Q8NCK7 471 aa15.94■□□□□ 0.14
NUP50-208ENST00000430547 DUSP19Q8WTR2 217 aa15.94■□□□□ 0.14
NUP50-208ENST00000430547 HOXB13Q92826 284 aaPredicted RBP15.94■□□□□ 0.14
NUP50-208ENST00000430547 ZBTB9Q96C00 473 aa15.94■□□□□ 0.14
NUP50-208ENST00000430547 FAM120BQ96EK7 910 aaKnown RBP15.94■□□□□ 0.14
NUP50-208ENST00000430547 GIMAP5Q96F15 307 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms