RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 EXOGQ9Y2C4 368 aaKnown RBP8.16□□□□□ -1.1
GABPB1-205ENST00000429662 SF3B6Q9Y3B4 125 aaKnown RBP8.16□□□□□ -1.1
GABPB1-205ENST00000429662 SPIN1Q9Y657 262 aaPredicted RBP8.16□□□□□ -1.1
GABPB1-205ENST00000429662 HECTD1Q9ULT8 2610 aa8.16□□□□□ -1.1
GABPB1-205ENST00000429662 A0A1W2PPV9 198 aa8.15□□□□□ -1.1
GABPB1-205ENST00000429662 A0A1W2PQ09 198 aa8.15□□□□□ -1.1
GABPB1-205ENST00000429662 LRIT2A6NDA9 550 aa8.15□□□□□ -1.1
GABPB1-205ENST00000429662 FAM227AF5H4B4 570 aa8.15□□□□□ -1.1
GABPB1-205ENST00000429662 H7BY64 318 aa8.15□□□□□ -1.1
GABPB1-205ENST00000429662 K7ESM1 405 aa8.15□□□□□ -1.1
GABPB1-205ENST00000429662 RTCAO00442 366 aaKnown RBP8.15□□□□□ -1.1
GABPB1-205ENST00000429662 MAN2B1O00754 1011 aa8.15□□□□□ -1.1
GABPB1-205ENST00000429662 AKAP8O43823 692 aaKnown RBP8.15□□□□□ -1.1
GABPB1-205ENST00000429662 B4GALT2O60909 372 aa8.15□□□□□ -1.1
GABPB1-205ENST00000429662 SEMA7AO75326 666 aa8.15□□□□□ -1.1
GABPB1-205ENST00000429662 UBXN7O94888 489 aa8.15□□□□□ -1.1
GABPB1-205ENST00000429662 MSL3P1P0C860 447 aa8.15□□□□□ -1.1
GABPB1-205ENST00000429662 CD53P19397 219 aa8.15□□□□□ -1.1
GABPB1-205ENST00000429662 FPR3P25089 353 aa8.15□□□□□ -1.1
GABPB1-205ENST00000429662 PRKAR1BP31321 381 aa8.15□□□□□ -1.1
GABPB1-205ENST00000429662 MPIP34949 423 aa8.15□□□□□ -1.1
GABPB1-205ENST00000429662 FEN1P39748 380 aaKnown RBP8.15□□□□□ -1.1
GABPB1-205ENST00000429662 ETV5P41161 510 aa8.15□□□□□ -1.1
GABPB1-205ENST00000429662 BUD31P41223 144 aaPredicted RBP8.15□□□□□ -1.1
GABPB1-205ENST00000429662 NR4A2P43354 598 aa8.15□□□□□ -1.1
GABPB1-205ENST00000429662 ETV1P50549 477 aa8.15□□□□□ -1.1
GABPB1-205ENST00000429662 RAB28P51157 221 aa8.15□□□□□ -1.1
GABPB1-205ENST00000429662 GAS1P54826 345 aa8.15□□□□□ -1.1
GABPB1-205ENST00000429662 TAS2R41P59536 307 aa8.15□□□□□ -1.1
GABPB1-205ENST00000429662 HNRNPA0Q13151 305 aaKnown RBP8.15□□□□□ -1.1
GABPB1-205ENST00000429662 TRAM1Q15629 374 aa8.15□□□□□ -1.1
GABPB1-205ENST00000429662 CARTPTQ16568 116 aa8.15□□□□□ -1.1
GABPB1-205ENST00000429662 BAK1Q16611 211 aa8.15□□□□□ -1.1
GABPB1-205ENST00000429662 DECR1Q16698 335 aa8.15□□□□□ -1.1
GABPB1-205ENST00000429662 POM121L1PQ3SYA9 428 aa8.15□□□□□ -1.1
GABPB1-205ENST00000429662 CRTC2Q53ET0 693 aaPredicted RBP8.15□□□□□ -1.1
GABPB1-205ENST00000429662 PYDC2Q56P42 97 aa8.15□□□□□ -1.1
GABPB1-205ENST00000429662 TRIQKQ629K1 86 aa8.15□□□□□ -1.1
GABPB1-205ENST00000429662 C22orf42Q6IC83 251 aa8.15□□□□□ -1.1
GABPB1-205ENST00000429662 ACSM5Q6NUN0 579 aa8.15□□□□□ -1.1
GABPB1-205ENST00000429662 UBE3DQ7Z6J8 389 aa8.15□□□□□ -1.1
GABPB1-205ENST00000429662 LAX1Q8IWV1 398 aa8.15□□□□□ -1.1
GABPB1-205ENST00000429662 ETFBKMTQ8IXQ9 262 aa8.15□□□□□ -1.1
GABPB1-205ENST00000429662 KLHL36Q8N4N3 616 aa8.15□□□□□ -1.1
GABPB1-205ENST00000429662 ASCC1Q8N9N2 400 aaKnown RBP8.15□□□□□ -1.1
GABPB1-205ENST00000429662 POGLUT1Q8NBL1 392 aa8.15□□□□□ -1.1
GABPB1-205ENST00000429662 OR2L8Q8NGY9 312 aa8.15□□□□□ -1.1
GABPB1-205ENST00000429662 LILRB4Q8NHJ6 448 aa8.15□□□□□ -1.1
GABPB1-205ENST00000429662 ENKURQ8TC29 256 aa8.15□□□□□ -1.1
GABPB1-205ENST00000429662 SLC7A6Q92536 515 aa8.15□□□□□ -1.1
GABPB1-205ENST00000429662 ST6GAL2Q96JF0 529 aa8.15□□□□□ -1.1
GABPB1-205ENST00000429662 PRAP1Q96NZ9 151 aa8.15□□□□□ -1.1
GABPB1-205ENST00000429662 SOSTQ9BQB4 213 aa8.15□□□□□ -1.1
GABPB1-205ENST00000429662 TIMM29Q9BSF4 260 aa8.15□□□□□ -1.1
GABPB1-205ENST00000429662 MENTQ9BUN1 341 aa8.15□□□□□ -1.1
GABPB1-205ENST00000429662 ACAT2Q9BWD1 397 aa8.15□□□□□ -1.1
GABPB1-205ENST00000429662 MIR1-1HGQ9H1L0 117 aa8.15□□□□□ -1.1
GABPB1-205ENST00000429662 SERHL2Q9H4I8 314 aa8.15□□□□□ -1.1
GABPB1-205ENST00000429662 MTG2Q9H4K7 406 aa8.15□□□□□ -1.1
GABPB1-205ENST00000429662 RNF121Q9H920 327 aa8.15□□□□□ -1.1
GABPB1-205ENST00000429662 MAN2C1Q9NTJ4 1040 aa8.15□□□□□ -1.1
GABPB1-205ENST00000429662 CUEDC1Q9NWM3 386 aaPredicted RBP8.15□□□□□ -1.1
GABPB1-205ENST00000429662 LYARQ9NX58 379 aaKnown RBP8.15□□□□□ -1.1
GABPB1-205ENST00000429662 NLGN3Q9NZ94 848 aa8.15□□□□□ -1.1
GABPB1-205ENST00000429662 H2AFY2Q9P0M6 372 aaPredicted RBP8.15□□□□□ -1.1
GABPB1-205ENST00000429662 FAM170BA6NMN3 283 aa8.14□□□□□ -1.11
GABPB1-205ENST00000429662 M0R3H8 397 aa8.14□□□□□ -1.11
GABPB1-205ENST00000429662 AP3D1O14617 1153 aa8.14□□□□□ -1.11
GABPB1-205ENST00000429662 PLD2O14939 933 aa8.14□□□□□ -1.11
GABPB1-205ENST00000429662 SIAH2O43255 324 aa8.14□□□□□ -1.11
GABPB1-205ENST00000429662 SCO2O43819 266 aa8.14□□□□□ -1.11
GABPB1-205ENST00000429662 OR5F1O95221 314 aa8.14□□□□□ -1.11
GABPB1-205ENST00000429662 IGFBP1P08833 259 aaPredicted RBP8.14□□□□□ -1.11
GABPB1-205ENST00000429662 CSF3P09919 207 aa8.14□□□□□ -1.11
GABPB1-205ENST00000429662 CCNYL3P0C7X3 344 aa8.14□□□□□ -1.11
GABPB1-205ENST00000429662 HIST1H1TP22492 207 aaPredicted RBP8.14□□□□□ -1.11
GABPB1-205ENST00000429662 MYL9P24844 172 aa8.14□□□□□ -1.11
GABPB1-205ENST00000429662 ERP29P30040 261 aaKnown RBP8.14□□□□□ -1.11
GABPB1-205ENST00000429662 HTR1FP30939 366 aa8.14□□□□□ -1.11
GABPB1-205ENST00000429662 RNF144AP50876 292 aaPredicted RBP8.14□□□□□ -1.11
GABPB1-205ENST00000429662 CDH11P55287 796 aa8.14□□□□□ -1.11
GABPB1-205ENST00000429662 STXBP1P61764 594 aaKnown RBP8.14□□□□□ -1.11
GABPB1-205ENST00000429662 CDK3Q00526 305 aa8.14□□□□□ -1.11
GABPB1-205ENST00000429662 CSTF1Q05048 431 aaKnown RBP8.14□□□□□ -1.11
GABPB1-205ENST00000429662 HYAL2Q12891 473 aa8.14□□□□□ -1.11
GABPB1-205ENST00000429662 CEBPEQ15744 281 aa8.14□□□□□ -1.11
GABPB1-205ENST00000429662 TBRG1Q3YBR2 411 aa8.14□□□□□ -1.11
GABPB1-205ENST00000429662 GPAT3Q53EU6 434 aa8.14□□□□□ -1.11
GABPB1-205ENST00000429662 ZNF311Q5JNZ3 666 aa8.14□□□□□ -1.11
GABPB1-205ENST00000429662 HACD4Q5VWC8 232 aa8.14□□□□□ -1.11
GABPB1-205ENST00000429662 MRM1Q6IN84 353 aaKnown RBP8.14□□□□□ -1.11
GABPB1-205ENST00000429662 PLET1Q6UQ28 207 aa8.14□□□□□ -1.11
GABPB1-205ENST00000429662 SPATC1Q76KD6 591 aa8.14□□□□□ -1.11
GABPB1-205ENST00000429662 NOXA1Q86UR1 476 aa8.14□□□□□ -1.11
GABPB1-205ENST00000429662 RBM45Q8IUH3 476 aaKnown RBP8.14□□□□□ -1.11
GABPB1-205ENST00000429662 GID4Q8IVV7 300 aa8.14□□□□□ -1.11
GABPB1-205ENST00000429662 PEX5LQ8IYB4 626 aa8.14□□□□□ -1.11
GABPB1-205ENST00000429662 TCTE3Q8IZS6 198 aa8.14□□□□□ -1.11
GABPB1-205ENST00000429662 CACTIN-AS1Q8N1I8 211 aa8.14□□□□□ -1.11
GABPB1-205ENST00000429662 IQCF1Q8N6M8 205 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms