RNA–Protein interactions for RNA: ENST00000428726.6

CD44-208, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD44, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-208ENST00000428726 TSSK6Q9BXA6 273 aa7.83□□□□□ -1.16
CD44-208ENST00000428726 MROQ9BYG7 248 aa7.83□□□□□ -1.16
CD44-208ENST00000428726 POLR2J2Q9GZM3 115 aaKnown RBP7.83□□□□□ -1.16
CD44-208ENST00000428726 PITHD1Q9GZP4 211 aaPredicted RBP7.83□□□□□ -1.16
CD44-208ENST00000428726 SLIRPQ9GZT3 109 aaKnown RBP7.83□□□□□ -1.16
CD44-208ENST00000428726 RACGAP1Q9H0H5 632 aa7.83□□□□□ -1.16
CD44-208ENST00000428726 NT5DC2Q9H857 520 aa7.83□□□□□ -1.16
CD44-208ENST00000428726 TIGARQ9NQ88 270 aa7.83□□□□□ -1.16
CD44-208ENST00000428726 WASH6PQ9NQA3 447 aa7.83□□□□□ -1.16
CD44-208ENST00000428726 C20orf141Q9NUB4 165 aa7.83□□□□□ -1.16
CD44-208ENST00000428726 A4GNTQ9UNA3 340 aa7.83□□□□□ -1.16
CD44-208ENST00000428726 NCKAP1Q9Y2A7 1128 aa7.83□□□□□ -1.16
CD44-208ENST00000428726 DTX4Q9Y2E6 619 aa7.83□□□□□ -1.16
CD44-208ENST00000428726 POFUT2Q9Y2G5 429 aa7.83□□□□□ -1.16
CD44-208ENST00000428726 DMXL1Q9Y485 3027 aa7.83□□□□□ -1.16
CD44-208ENST00000428726 A0A0A6YYD5 115 aa7.82□□□□□ -1.16
CD44-208ENST00000428726 GPR89AB7ZAQ6 455 aa7.82□□□□□ -1.16
CD44-208ENST00000428726 CDC42EP2O14613 210 aa7.82□□□□□ -1.16
CD44-208ENST00000428726 SLC22A1O15245 554 aa7.82□□□□□ -1.16
CD44-208ENST00000428726 ADH1BP00325 375 aa7.82□□□□□ -1.16
CD44-208ENST00000428726 CCNYL3P0C7X3 344 aa7.82□□□□□ -1.16
CD44-208ENST00000428726 GPR89BP0CG08 455 aa7.82□□□□□ -1.16
CD44-208ENST00000428726 THEGLP0DJG4 465 aa7.82□□□□□ -1.16
CD44-208ENST00000428726 CSNK2A2P19784 350 aaPredicted RBP7.82□□□□□ -1.16
CD44-208ENST00000428726 TGM1P22735 817 aa7.82□□□□□ -1.16
CD44-208ENST00000428726 PKLRP30613 574 aa7.82□□□□□ -1.16
CD44-208ENST00000428726 GABRA3P34903 492 aa7.82□□□□□ -1.16
CD44-208ENST00000428726 PCBP3P57721 371 aaKnown RBP7.82□□□□□ -1.16
CD44-208ENST00000428726 RAB15P59190 212 aa7.82□□□□□ -1.16
CD44-208ENST00000428726 CDC42P60953 191 aa7.82□□□□□ -1.16
CD44-208ENST00000428726 NXNL2Q5VZ03 156 aa7.82□□□□□ -1.16
CD44-208ENST00000428726 SAXO2Q658L1 398 aa7.82□□□□□ -1.16
CD44-208ENST00000428726 Q7L0L9 218 aa7.82□□□□□ -1.16
CD44-208ENST00000428726 ARL14Q8N4G2 192 aa7.82□□□□□ -1.16
CD44-208ENST00000428726 SLC44A3Q8N4M1 653 aa7.82□□□□□ -1.16
CD44-208ENST00000428726 DYNC2LI1Q8TCX1 351 aa7.82□□□□□ -1.16
CD44-208ENST00000428726 MRPL38Q96DV4 380 aaKnown RBP7.82□□□□□ -1.16
CD44-208ENST00000428726 ELP4Q96EB1 424 aa7.82□□□□□ -1.16
CD44-208ENST00000428726 C1GALT1C1Q96EU7 318 aa7.82□□□□□ -1.16
CD44-208ENST00000428726 TGM7Q96PF1 710 aa7.82□□□□□ -1.16
CD44-208ENST00000428726 KLHDC3Q9BQ90 382 aa7.82□□□□□ -1.16
CD44-208ENST00000428726 TTYH2Q9BSA4 534 aa7.82□□□□□ -1.16
CD44-208ENST00000428726 ZNF576Q9H609 170 aa7.82□□□□□ -1.16
CD44-208ENST00000428726 TRPV4Q9HBA0 871 aa7.82□□□□□ -1.16
CD44-208ENST00000428726 NECTIN3Q9NQS3 549 aa7.82□□□□□ -1.16
CD44-208ENST00000428726 P2RX2Q9UBL9 471 aa7.82□□□□□ -1.16
CD44-208ENST00000428726 ACSL5Q9ULC5 683 aa7.82□□□□□ -1.16
CD44-208ENST00000428726 SLC7A7Q9UM01 511 aa7.82□□□□□ -1.16
CD44-208ENST00000428726 CHST2Q9Y4C5 530 aa7.82□□□□□ -1.16
CD44-208ENST00000428726 PTPRZ1P23471 2315 aaPredicted RBP7.82□□□□□ -1.16
CD44-208ENST00000428726 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.82□□□□□ -1.16
CD44-208ENST00000428726 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.82□□□□□ -1.16
CD44-208ENST00000428726 C2orf72A6NCS6 295 aa7.82□□□□□ -1.16
CD44-208ENST00000428726 SOCS6O14544 535 aa7.82□□□□□ -1.16
CD44-208ENST00000428726 ARHGAP33O14559 1287 aa7.82□□□□□ -1.16
CD44-208ENST00000428726 PLRG1O43660 514 aaKnown RBP7.82□□□□□ -1.16
CD44-208ENST00000428726 COQ9O75208 318 aa7.82□□□□□ -1.16
CD44-208ENST00000428726 IFNA16P05015 189 aa7.82□□□□□ -1.16
CD44-208ENST00000428726 TGFBR2P37173 567 aa7.82□□□□□ -1.16
CD44-208ENST00000428726 RPS27P42677 84 aaKnown RBP7.82□□□□□ -1.16
CD44-208ENST00000428726 MAGEB1P43366 347 aa7.82□□□□□ -1.16
CD44-208ENST00000428726 GSTM5P46439 218 aa7.82□□□□□ -1.16
CD44-208ENST00000428726 OR1D4P47884 311 aa7.82□□□□□ -1.16
CD44-208ENST00000428726 CSNK1EP49674 416 aaKnown RBP7.82□□□□□ -1.16
CD44-208ENST00000428726 UGT2B15P54855 530 aa7.82□□□□□ -1.16
CD44-208ENST00000428726 RAB25P57735 213 aa7.82□□□□□ -1.16
CD44-208ENST00000428726 ODF4Q2M2E3 257 aa7.82□□□□□ -1.16
CD44-208ENST00000428726 MINDY4Q4G0A6 757 aa7.82□□□□□ -1.16
CD44-208ENST00000428726 C1QTNF12Q5T7M4 302 aa7.82□□□□□ -1.16
CD44-208ENST00000428726 FAM27D1Q5T7N8 215 aa7.82□□□□□ -1.16
CD44-208ENST00000428726 C1orf189Q5VU69 101 aa7.82□□□□□ -1.16
CD44-208ENST00000428726 OR5M10Q6IEU7 315 aa7.82□□□□□ -1.16
CD44-208ENST00000428726 CHRDL2Q6WN34 429 aa7.82□□□□□ -1.16
CD44-208ENST00000428726 LINC00299Q6ZSB3 139 aa7.82□□□□□ -1.16
CD44-208ENST00000428726 PLEKHM3Q6ZWE6 761 aa7.82□□□□□ -1.16
CD44-208ENST00000428726 KIF18BQ86Y91 864 aa7.82□□□□□ -1.16
CD44-208ENST00000428726 OR2L5Q8NG80 312 aa7.82□□□□□ -1.16
CD44-208ENST00000428726 YIPF6Q96EC8 236 aa7.82□□□□□ -1.16
CD44-208ENST00000428726 RIPOR3Q96MK2 946 aa7.82□□□□□ -1.16
CD44-208ENST00000428726 MCHR1Q99705 422 aa7.82□□□□□ -1.16
CD44-208ENST00000428726 TP63Q9H3D4 680 aaPredicted RBP7.82□□□□□ -1.16
CD44-208ENST00000428726 GIMAP4Q9NUV9 329 aa7.82□□□□□ -1.16
CD44-208ENST00000428726 SOHLH2Q9NX45 425 aa7.82□□□□□ -1.16
CD44-208ENST00000428726 ACTR10Q9NZ32 417 aa7.82□□□□□ -1.16
CD44-208ENST00000428726 PSORS1C1Q9UIG5 152 aa7.82□□□□□ -1.16
CD44-208ENST00000428726 IFT52Q9Y366 437 aa7.82□□□□□ -1.16
CD44-208ENST00000428726 PCDHGA3Q9Y5H0 932 aa7.82□□□□□ -1.16
CD44-208ENST00000428726 SPIN1Q9Y657 262 aaPredicted RBP7.82□□□□□ -1.16
CD44-208ENST00000428726 OR2A25A4D2G3 310 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 ANKRD61A6NGH8 418 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 DOK2O60496 412 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 ADAM11O75078 769 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 GPX5O75715 221 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 SEMA4FO95754 770 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 SLC35G6P0C7Q6 338 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 NR2F6P10588 404 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 RHCEP18577 417 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 ETV5P41161 510 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 KCNJ5P48544 419 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 ETV1P50549 477 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms