RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 FRKP42685 505 aaPredicted RBP16.67■□□□□ 0.26
PSPC1-202ENST00000427943 KIR2DL3P43628 341 aa16.67■□□□□ 0.26
PSPC1-202ENST00000427943 MANFP55145 182 aaKnown RBP16.67■□□□□ 0.26
PSPC1-202ENST00000427943 DSCR4P56555 118 aaPredicted RBP16.67■□□□□ 0.26
PSPC1-202ENST00000427943 CLDN18P56856 261 aa16.67■□□□□ 0.26
PSPC1-202ENST00000427943 FOXF2Q12947 444 aa16.67■□□□□ 0.26
PSPC1-202ENST00000427943 FBXL19-AS1Q494R0 122 aa16.67■□□□□ 0.26
PSPC1-202ENST00000427943 XKR7Q5GH72 579 aa16.67■□□□□ 0.26
PSPC1-202ENST00000427943 MARCH3Q86UD3 253 aa16.67■□□□□ 0.26
PSPC1-202ENST00000427943 UBQLNLQ8IYU4 475 aa16.67■□□□□ 0.26
PSPC1-202ENST00000427943 GCNT2Q8N0V5 402 aa16.67■□□□□ 0.26
PSPC1-202ENST00000427943 NUP43Q8NFH3 380 aa16.67■□□□□ 0.26
PSPC1-202ENST00000427943 GPR151Q8TDV0 419 aa16.67■□□□□ 0.26
PSPC1-202ENST00000427943 SLC9A6Q92581 669 aa16.67■□□□□ 0.26
PSPC1-202ENST00000427943 LRRC46Q96FV0 321 aa16.67■□□□□ 0.26
PSPC1-202ENST00000427943 OTUB1Q96FW1 271 aaPredicted RBP16.67■□□□□ 0.26
PSPC1-202ENST00000427943 C1orf50Q9BV19 199 aa16.67■□□□□ 0.26
PSPC1-202ENST00000427943 FAM120CQ9NX05 1096 aaKnown RBP16.67■□□□□ 0.26
PSPC1-202ENST00000427943 CLCF1Q9UBD9 225 aa16.67■□□□□ 0.26
PSPC1-202ENST00000427943 MRTO4Q9UKD2 239 aaKnown RBP16.67■□□□□ 0.26
PSPC1-202ENST00000427943 MRPS18CQ9Y3D5 142 aaKnown RBP16.67■□□□□ 0.26
PSPC1-202ENST00000427943 F8P00451 2351 aa16.66■□□□□ 0.26
PSPC1-202ENST00000427943 SPG11Q96JI7 2443 aa16.66■□□□□ 0.26
PSPC1-202ENST00000427943 GMFGO60234 142 aa16.66■□□□□ 0.26
PSPC1-202ENST00000427943 PEX11AO75192 247 aa16.66■□□□□ 0.26
PSPC1-202ENST00000427943 KCNH1O95259 989 aa16.66■□□□□ 0.26
PSPC1-202ENST00000427943 ACP2P11117 423 aa16.66■□□□□ 0.26
PSPC1-202ENST00000427943 HK1P19367 917 aa16.66■□□□□ 0.26
PSPC1-202ENST00000427943 CHMP24386 653 aa16.66■□□□□ 0.26
PSPC1-202ENST00000427943 ASMTP46597 345 aa16.66■□□□□ 0.26
PSPC1-202ENST00000427943 PSMD4P55036 377 aaKnown RBP16.66■□□□□ 0.26
PSPC1-202ENST00000427943 B3GALT5-AS1P59052 145 aa16.66■□□□□ 0.26
PSPC1-202ENST00000427943 GRAMD1BQ3KR37 738 aa16.66■□□□□ 0.26
PSPC1-202ENST00000427943 RAET1LQ5VY80 246 aa16.66■□□□□ 0.26
PSPC1-202ENST00000427943 ADGRE4PQ86SQ3 457 aa16.66■□□□□ 0.26
PSPC1-202ENST00000427943 EXOC3L1Q86VI1 746 aa16.66■□□□□ 0.26
PSPC1-202ENST00000427943 OR5M1Q8NGP8 315 aa16.66■□□□□ 0.26
PSPC1-202ENST00000427943 PKNOX2Q96KN3 472 aa16.66■□□□□ 0.26
PSPC1-202ENST00000427943 PPP3R2Q96LZ3 170 aa16.66■□□□□ 0.26
PSPC1-202ENST00000427943 C3orf30Q96M34 536 aa16.66■□□□□ 0.26
PSPC1-202ENST00000427943 MS4A4EQ96PG1 132 aa16.66■□□□□ 0.26
PSPC1-202ENST00000427943 GPATCH1Q9BRR8 931 aaKnown RBP16.66■□□□□ 0.26
PSPC1-202ENST00000427943 C3orf14Q9HBI5 128 aa16.66■□□□□ 0.26
PSPC1-202ENST00000427943 SDHAF3Q9NRP4 125 aa16.66■□□□□ 0.26
PSPC1-202ENST00000427943 ZDHHC2Q9UIJ5 367 aa16.66■□□□□ 0.26
PSPC1-202ENST00000427943 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.65■□□□□ 0.26
PSPC1-202ENST00000427943 SCAMP2O15127 329 aaKnown RBP16.65■□□□□ 0.26
PSPC1-202ENST00000427943 TYROBPO43914 113 aa16.65■□□□□ 0.26
PSPC1-202ENST00000427943 NKX2-2O95096 273 aa16.65■□□□□ 0.26
PSPC1-202ENST00000427943 BPGMP07738 259 aa16.65■□□□□ 0.26
PSPC1-202ENST00000427943 OPRM1P35372 400 aa16.65■□□□□ 0.26
PSPC1-202ENST00000427943 HPCAL1P37235 193 aa16.65■□□□□ 0.26
PSPC1-202ENST00000427943 KRT71Q3SY84 523 aa16.65■□□□□ 0.26
PSPC1-202ENST00000427943 FLYWCH1Q4VC44 716 aa16.65■□□□□ 0.26
PSPC1-202ENST00000427943 GRAMD2AQ8IUY3 354 aa16.65■□□□□ 0.26
PSPC1-202ENST00000427943 CDRT4Q8N9R6 151 aa16.65■□□□□ 0.26
PSPC1-202ENST00000427943 OR7A2PQ8NGA2 310 aa16.65■□□□□ 0.26
PSPC1-202ENST00000427943 DUSP19Q8WTR2 217 aa16.65■□□□□ 0.26
PSPC1-202ENST00000427943 INTS12Q96CB8 462 aaKnown RBP16.65■□□□□ 0.26
PSPC1-202ENST00000427943 GIMAP5Q96F15 307 aa16.65■□□□□ 0.26
PSPC1-202ENST00000427943 YIPF4Q9BSR8 244 aa16.65■□□□□ 0.26
PSPC1-202ENST00000427943 TBL1XR1Q9BZK7 514 aa16.65■□□□□ 0.26
PSPC1-202ENST00000427943 ACSS1Q9NUB1 689 aaPredicted RBP16.65■□□□□ 0.26
PSPC1-202ENST00000427943 DNAJB12Q9NXW2 375 aaKnown RBP16.65■□□□□ 0.26
PSPC1-202ENST00000427943 TTC36A6NLP5 189 aa16.64■□□□□ 0.25
PSPC1-202ENST00000427943 TMEM114B3SHH9 223 aa16.64■□□□□ 0.25
PSPC1-202ENST00000427943 EMC8O43402 210 aa16.64■□□□□ 0.25
PSPC1-202ENST00000427943 ANGPTL1O95841 491 aa16.64■□□□□ 0.25
PSPC1-202ENST00000427943 MAPK1P28482 360 aa16.64■□□□□ 0.25
PSPC1-202ENST00000427943 SERPINB5P36952 375 aa16.64■□□□□ 0.25
PSPC1-202ENST00000427943 MAP3K8P41279 467 aa16.64■□□□□ 0.25
PSPC1-202ENST00000427943 ETV4P43268 484 aa16.64■□□□□ 0.25
PSPC1-202ENST00000427943 CLK3P49761 638 aaKnown RBP16.64■□□□□ 0.25
PSPC1-202ENST00000427943 GANABQ14697 944 aaKnown RBP16.64■□□□□ 0.25
PSPC1-202ENST00000427943 PTGR1Q14914 329 aa16.64■□□□□ 0.25
PSPC1-202ENST00000427943 VPS26BQ4G0F5 336 aa16.64■□□□□ 0.25
PSPC1-202ENST00000427943 ATP6AP1LQ52LC2 224 aa16.64■□□□□ 0.25
PSPC1-202ENST00000427943 MFSD12Q6NUT3 480 aa16.64■□□□□ 0.25
PSPC1-202ENST00000427943 FIGNL1Q6PIW4 674 aa16.64■□□□□ 0.25
PSPC1-202ENST00000427943 APOOLQ6UXV4 268 aa16.64■□□□□ 0.25
PSPC1-202ENST00000427943 R3HCC1LQ7Z5L2 792 aaKnown RBP16.64■□□□□ 0.25
PSPC1-202ENST00000427943 LUZP2Q86TE4 346 aa16.64■□□□□ 0.25
PSPC1-202ENST00000427943 SLC16A11Q8NCK7 471 aa16.64■□□□□ 0.25
PSPC1-202ENST00000427943 CEP70Q8NHQ1 597 aa16.64■□□□□ 0.25
PSPC1-202ENST00000427943 NUDT8Q8WV74 236 aa16.64■□□□□ 0.25
PSPC1-202ENST00000427943 JADE3Q92613 823 aa16.64■□□□□ 0.25
PSPC1-202ENST00000427943 HOXB13Q92826 284 aaPredicted RBP16.64■□□□□ 0.25
PSPC1-202ENST00000427943 WNT2BQ93097 391 aa16.64■□□□□ 0.25
PSPC1-202ENST00000427943 ZBTB9Q96C00 473 aa16.64■□□□□ 0.25
PSPC1-202ENST00000427943 MTERF3Q96E29 417 aa16.64■□□□□ 0.25
PSPC1-202ENST00000427943 C16orf58Q96GQ5 468 aa16.64■□□□□ 0.25
PSPC1-202ENST00000427943 TM9SF2Q99805 663 aa16.64■□□□□ 0.25
PSPC1-202ENST00000427943 POLDIP3Q9BY77 421 aaKnown RBP16.64■□□□□ 0.25
PSPC1-202ENST00000427943 SIRT3Q9NTG7 399 aaPredicted RBP16.64■□□□□ 0.25
PSPC1-202ENST00000427943 ATP6V1HQ9UI12 483 aa16.64■□□□□ 0.25
PSPC1-202ENST00000427943 FOXD3Q9UJU5 478 aaPredicted RBP16.64■□□□□ 0.25
PSPC1-202ENST00000427943 AKAP6Q13023 2319 aa16.64■□□□□ 0.25
PSPC1-202ENST00000427943 H0YC42 278 aa16.63■□□□□ 0.25
PSPC1-202ENST00000427943 H3BML4 177 aa16.63■□□□□ 0.25
PSPC1-202ENST00000427943 SEC14L5O43304 696 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms