RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 STK35Q8TDR2 534 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 RXFP4Q8TDU9 374 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 EEF1AKMT1Q8WVE0 214 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 SMIM4Q8WVI0 70 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 XAGE5Q8WWM1 108 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 LCN9Q8WX39 176 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 KCTD13Q8WZ19 329 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 RSC1A1Q92681 617 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 TFGQ92734 400 aaPredicted RBP5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 NT5C3BQ969T7 300 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 MOCOSQ96EN8 888 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 SAT2Q96F10 170 aaPredicted RBP5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 CMTM7Q96FZ5 175 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 TEX37Q96LM6 180 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 HSPA12BQ96MM6 686 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 PTCHD1Q96NR3 888 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 NEU1Q99519 415 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 BARD1Q99728 777 aaKnown RBP5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 EGFL8Q99944 293 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 CMSS1Q9BQ75 279 aaKnown RBP5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 MRPL45Q9BRJ2 306 aaKnown RBP5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 JAM3Q9BX67 310 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 CPEB1Q9BZB8 566 aaKnown RBP5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 TM6SF2Q9BZW4 377 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 FXYD6Q9H0Q3 95 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 OR52A5Q9H2C5 316 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 UBQLN3Q9H347 655 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 AMBNQ9NP70 447 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 TRIM36Q9NQ86 728 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 ZNF302Q9NR11 478 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 MED17Q9NVC6 651 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 DZANK1Q9NVP4 752 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 PARPBPQ9NWS1 579 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 GAR1Q9NY12 217 aaKnown RBP5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 KLHL9Q9P2J3 617 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 GHRLQ9UBU3 117 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 FTSJ1Q9UET6 329 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 FBXO10Q9UK96 956 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 TNFSF13BQ9Y275 285 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 SLC9A8Q9Y2E8 581 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 PCDHB1Q9Y5F3 818 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 PPP2R3BQ9Y5P8 575 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 IRAK3Q9Y616 596 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 OTOFQ9HC10 1997 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 STRCQ7RTU9 1775 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 TSC2P49815 1807 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 LNP1A1A4G5 178 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 SERTM1A2A2V5 107 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 OR2M5A3KFT3 312 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 OR6C68A6NDL8 312 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 UNC119BA6NIH7 251 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 H3BN98 237 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 GABARAPH6UMI1 98 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 M0QYT0 321 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 M0QZ92 97 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 LGALS8O00214 317 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 CLDN4O14493 209 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 BRINP1O60477 761 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 FKTNO75072 461 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 GATBO75879 557 aaKnown RBP5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 TOXO94900 526 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 APBB3O95704 486 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 HKR1P10072 659 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 TPT1P13693 172 aaKnown RBP5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 APEHP13798 732 aaKnown RBP5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 MTHFD2P13995 350 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 DAOP14920 347 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 HIST1H1BP16401 226 aaKnown RBP5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 RCC1P18754 421 aaPredicted RBP5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 ELK1P19419 428 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 CXCL2P19875 107 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 ITGA3P26006 1051 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 KLRK1P26718 216 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 NOS3P29474 1203 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 CCND3P30281 292 aaPredicted RBP5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 CNR2P34972 360 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 PBX3P40426 434 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 CDKN2DP55273 166 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 SCAND1P57086 179 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 DAOAP59103 153 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 BPIFB3P59826 476 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 NAAAQ02083 359 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 GLO1Q04760 184 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 SSBP1Q04837 148 aaKnown RBP5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 CNTN1Q12860 1018 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 MTAPQ13126 283 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 ARHGEF7Q14155 803 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 GRB14Q14449 540 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 RHEBQ15382 184 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 P2RY14Q15391 338 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 RBMS2Q15434 407 aaKnown RBP5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 OR4D1Q15615 310 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 SMAD1Q15797 465 aaKnown RBP5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 USF2Q15853 346 aaPredicted RBP5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 GGTA1PQ4G0N0 100 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 C4orf17Q53FE4 359 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 UBE2NLQ5JXB2 153 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 PRAMEF19Q5SWL8 479 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 ARMC12Q5T9G4 340 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 RIPPLY2Q5TAB7 128 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms