RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 MROH9Q5TGP6 573 aa13.11□□□□□ -0.31
PDAP1-202ENST00000426447 MARCH3Q86UD3 253 aa13.11□□□□□ -0.31
PDAP1-202ENST00000426447 SAMD14Q8IZD0 417 aaPredicted RBP13.11□□□□□ -0.31
PDAP1-202ENST00000426447 C1orf52Q8N6N3 182 aaKnown RBP13.11□□□□□ -0.31
PDAP1-202ENST00000426447 EXOSC8Q96B26 276 aaKnown RBP13.11□□□□□ -0.31
PDAP1-202ENST00000426447 S100PBPQ96BU1 408 aa13.11□□□□□ -0.31
PDAP1-202ENST00000426447 MRRFQ96E11 262 aaKnown RBP13.11□□□□□ -0.31
PDAP1-202ENST00000426447 KCNK17Q96T54 332 aa13.11□□□□□ -0.31
PDAP1-202ENST00000426447 HDHD5Q9BXW7 423 aa13.11□□□□□ -0.31
PDAP1-202ENST00000426447 BEX2Q9BXY8 128 aa13.11□□□□□ -0.31
PDAP1-202ENST00000426447 AMBRA1Q9C0C7 1298 aa13.11□□□□□ -0.31
PDAP1-202ENST00000426447 ALG2Q9H553 416 aa13.11□□□□□ -0.31
PDAP1-202ENST00000426447 C12orf49Q9H741 205 aa13.11□□□□□ -0.31
PDAP1-202ENST00000426447 BARX1Q9HBU1 254 aaPredicted RBP13.11□□□□□ -0.31
PDAP1-202ENST00000426447 ZBTB26Q9HCK0 441 aa13.11□□□□□ -0.31
PDAP1-202ENST00000426447 GLRX2Q9NS18 164 aa13.11□□□□□ -0.31
PDAP1-202ENST00000426447 PAQR5Q9NXK6 330 aaPredicted RBP13.11□□□□□ -0.31
PDAP1-202ENST00000426447 WHRNQ9P202 907 aa13.11□□□□□ -0.31
PDAP1-202ENST00000426447 SNX8Q9Y5X2 465 aa13.11□□□□□ -0.31
PDAP1-202ENST00000426447 SONP18583 2426 aaKnown RBP13.11□□□□□ -0.31
PDAP1-202ENST00000426447 A0A096LPK6 155 aa13.1□□□□□ -0.31
PDAP1-202ENST00000426447 SHISA8B8ZZ34 492 aa13.1□□□□□ -0.31
PDAP1-202ENST00000426447 SSX4O60224 188 aa13.1□□□□□ -0.31
PDAP1-202ENST00000426447 GPRIN2O60269 458 aa13.1□□□□□ -0.31
PDAP1-202ENST00000426447 IGHV4-39P01824 125 aa13.1□□□□□ -0.31
PDAP1-202ENST00000426447 PSMB1P20618 241 aaKnown RBP13.1□□□□□ -0.31
PDAP1-202ENST00000426447 STX2P32856 288 aa13.1□□□□□ -0.31
PDAP1-202ENST00000426447 MPIP34949 423 aa13.1□□□□□ -0.31
PDAP1-202ENST00000426447 PAFAH1B1P43034 410 aa13.1□□□□□ -0.31
PDAP1-202ENST00000426447 RFX3P48380 749 aa13.1□□□□□ -0.31
PDAP1-202ENST00000426447 MRPS25P82663 173 aaKnown RBP13.1□□□□□ -0.31
PDAP1-202ENST00000426447 ZNF155Q12901 538 aaPredicted RBP13.1□□□□□ -0.31
PDAP1-202ENST00000426447 DECR1Q16698 335 aa13.1□□□□□ -0.31
PDAP1-202ENST00000426447 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.1□□□□□ -0.31
PDAP1-202ENST00000426447 NCMAPQ5T1S8 102 aa13.1□□□□□ -0.31
PDAP1-202ENST00000426447 GTF2IRD2BQ6EKJ0 949 aa13.1□□□□□ -0.31
PDAP1-202ENST00000426447 GTF2IRD2Q86UP8 949 aa13.1□□□□□ -0.31
PDAP1-202ENST00000426447 CREG2Q8IUH2 290 aa13.1□□□□□ -0.31
PDAP1-202ENST00000426447 WDR75Q8IWA0 830 aaKnown RBP13.1□□□□□ -0.31
PDAP1-202ENST00000426447 CEP112Q8N8E3 955 aa13.1□□□□□ -0.31
PDAP1-202ENST00000426447 OR4F6Q8NGB9 312 aa13.1□□□□□ -0.31
PDAP1-202ENST00000426447 OR10D3Q8NH80 312 aa13.1□□□□□ -0.31
PDAP1-202ENST00000426447 FBF1Q8TES7 1133 aa13.1□□□□□ -0.31
PDAP1-202ENST00000426447 NEUROG1Q92886 237 aa13.1□□□□□ -0.31
PDAP1-202ENST00000426447 MRTO4Q9UKD2 239 aaKnown RBP13.1□□□□□ -0.31
PDAP1-202ENST00000426447 SNX6Q9UNH7 406 aa13.1□□□□□ -0.31
PDAP1-202ENST00000426447 ABCG2Q9UNQ0 655 aa13.1□□□□□ -0.31
PDAP1-202ENST00000426447 ZSCAN12O43309 604 aa13.09□□□□□ -0.31
PDAP1-202ENST00000426447 NDUFB5O43674 189 aa13.09□□□□□ -0.31
PDAP1-202ENST00000426447 NDUFS7O75251 213 aa13.09□□□□□ -0.31
PDAP1-202ENST00000426447 OPN1LWP04000 364 aa13.09□□□□□ -0.31
PDAP1-202ENST00000426447 IL32P24001 234 aa13.09□□□□□ -0.31
PDAP1-202ENST00000426447 TYK2P29597 1187 aa13.09□□□□□ -0.31
PDAP1-202ENST00000426447 PSG6Q00889 435 aa13.09□□□□□ -0.31
PDAP1-202ENST00000426447 C17orf67Q0P5P2 114 aa13.09□□□□□ -0.31
PDAP1-202ENST00000426447 TRAF3Q13114 568 aa13.09□□□□□ -0.31
PDAP1-202ENST00000426447 NAB1Q13506 487 aa13.09□□□□□ -0.31
PDAP1-202ENST00000426447 ZNF672Q499Z4 452 aaPredicted RBP13.09□□□□□ -0.31
PDAP1-202ENST00000426447 CYP27C1Q4G0S4 372 aa13.09□□□□□ -0.31
PDAP1-202ENST00000426447 GGNQ86UU5 652 aa13.09□□□□□ -0.31
PDAP1-202ENST00000426447 CCDC25Q86WR0 208 aa13.09□□□□□ -0.31
PDAP1-202ENST00000426447 FAM9CQ8IZT9 166 aa13.09□□□□□ -0.31
PDAP1-202ENST00000426447 OR7G2Q8NG99 324 aa13.09□□□□□ -0.31
PDAP1-202ENST00000426447 NSUN5Q96P11 429 aaKnown RBP13.09□□□□□ -0.31
PDAP1-202ENST00000426447 TBL1XR1Q9BZK7 514 aa13.09□□□□□ -0.31
PDAP1-202ENST00000426447 RTN4RQ9BZR6 473 aa13.09□□□□□ -0.31
PDAP1-202ENST00000426447 VPS11Q9H270 941 aa13.09□□□□□ -0.31
PDAP1-202ENST00000426447 BRF2Q9HAW0 419 aa13.09□□□□□ -0.31
PDAP1-202ENST00000426447 FBXO34Q9NWN3 711 aa13.09□□□□□ -0.31
PDAP1-202ENST00000426447 FAM120CQ9NX05 1096 aaKnown RBP13.09□□□□□ -0.31
PDAP1-202ENST00000426447 FLRT3Q9NZU0 649 aa13.09□□□□□ -0.31
PDAP1-202ENST00000426447 XPR1Q9UBH6 696 aa13.09□□□□□ -0.31
PDAP1-202ENST00000426447 VPS29Q9UBQ0 182 aa13.09□□□□□ -0.31
PDAP1-202ENST00000426447 GDF2Q9UK05 429 aaPredicted RBP13.09□□□□□ -0.31
PDAP1-202ENST00000426447 PCTPQ9UKL6 214 aa13.09□□□□□ -0.31
PDAP1-202ENST00000426447 VDAC3Q9Y277 283 aa13.09□□□□□ -0.31
PDAP1-202ENST00000426447 ROS1P08922 2347 aa13.08□□□□□ -0.31
PDAP1-202ENST00000426447 CUBNO60494 3623 aa13.08□□□□□ -0.32
PDAP1-202ENST00000426447 GNG14A0A1W2PPG7 69 aa13.08□□□□□ -0.32
PDAP1-202ENST00000426447 CXCL13O43927 109 aa13.08□□□□□ -0.32
PDAP1-202ENST00000426447 PLOD3O60568 738 aa13.08□□□□□ -0.32
PDAP1-202ENST00000426447 COQ9O75208 318 aa13.08□□□□□ -0.32
PDAP1-202ENST00000426447 SMIM24O75264 130 aa13.08□□□□□ -0.32
PDAP1-202ENST00000426447 TUBBP07437 444 aa13.08□□□□□ -0.32
PDAP1-202ENST00000426447 IL3P08700 152 aa13.08□□□□□ -0.32
PDAP1-202ENST00000426447 PYGBP11216 843 aa13.08□□□□□ -0.32
PDAP1-202ENST00000426447 PSMD4P55036 377 aaKnown RBP13.08□□□□□ -0.32
PDAP1-202ENST00000426447 ZNF844Q08AG5 666 aa13.08□□□□□ -0.32
PDAP1-202ENST00000426447 HEPACAMQ14CZ8 416 aa13.08□□□□□ -0.32
PDAP1-202ENST00000426447 TSC22D1Q15714 1073 aa13.08□□□□□ -0.32
PDAP1-202ENST00000426447 UAP1Q16222 522 aaPredicted RBP13.08□□□□□ -0.32
PDAP1-202ENST00000426447 KRTAP24-1Q3LI83 254 aa13.08□□□□□ -0.32
PDAP1-202ENST00000426447 GGTA1PQ4G0N0 100 aa13.08□□□□□ -0.32
PDAP1-202ENST00000426447 C6orf52Q5T4I8 152 aa13.08□□□□□ -0.32
PDAP1-202ENST00000426447 MFSD12Q6NUT3 480 aa13.08□□□□□ -0.32
PDAP1-202ENST00000426447 ZNF619Q8N2I2 560 aa13.08□□□□□ -0.32
PDAP1-202ENST00000426447 HSD17B8Q92506 261 aa13.08□□□□□ -0.32
PDAP1-202ENST00000426447 GPR78Q96P69 363 aa13.08□□□□□ -0.32
PDAP1-202ENST00000426447 BBS4Q96RK4 519 aa13.08□□□□□ -0.32
PDAP1-202ENST00000426447 HBEGFQ99075 208 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms