RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 ACOT4Q8N9L9 421 aa12.54□□□□□ -0.4
USP42-203ENST00000426246 MINDY2Q8NBR6 621 aa12.54□□□□□ -0.4
USP42-203ENST00000426246 OR4C15Q8NGM1 316 aa12.54□□□□□ -0.4
USP42-203ENST00000426246 CCL4L1Q8NHW4 92 aa12.54□□□□□ -0.4
USP42-203ENST00000426246 CDS1Q92903 461 aa12.54□□□□□ -0.4
USP42-203ENST00000426246 KXD1Q9BQD3 176 aa12.54□□□□□ -0.4
USP42-203ENST00000426246 SLC7A7Q9UM01 511 aa12.54□□□□□ -0.4
USP42-203ENST00000426246 LRRN3E7EW58 273 aa12.54□□□□□ -0.4
USP42-203ENST00000426246 RAD1O60671 282 aa12.54□□□□□ -0.4
USP42-203ENST00000426246 UGDHO60701 494 aa12.54□□□□□ -0.4
USP42-203ENST00000426246 HSD3B1P14060 373 aa12.54□□□□□ -0.4
USP42-203ENST00000426246 HSD3B2P26439 372 aa12.54□□□□□ -0.4
USP42-203ENST00000426246 TRIM23P36406 574 aa12.54□□□□□ -0.4
USP42-203ENST00000426246 ACTR1BP42025 376 aa12.54□□□□□ -0.4
USP42-203ENST00000426246 OR10A3P58181 314 aa12.54□□□□□ -0.4
USP42-203ENST00000426246 ACTR1AP61163 376 aa12.54□□□□□ -0.4
USP42-203ENST00000426246 RUNX3Q13761 415 aa12.54□□□□□ -0.4
USP42-203ENST00000426246 EXOSC7Q15024 291 aaKnown RBP12.54□□□□□ -0.4
USP42-203ENST00000426246 EIF4HQ15056 248 aaKnown RBP12.54□□□□□ -0.4
USP42-203ENST00000426246 METTL2BQ6P1Q9 378 aaKnown RBP12.54□□□□□ -0.4
USP42-203ENST00000426246 ENPP7Q6UWV6 458 aa12.54□□□□□ -0.4
USP42-203ENST00000426246 CCDC80Q76M96 950 aa12.54□□□□□ -0.4
USP42-203ENST00000426246 ARL14Q8N4G2 192 aa12.54□□□□□ -0.4
USP42-203ENST00000426246 GRPEL2Q8TAA5 225 aa12.54□□□□□ -0.4
USP42-203ENST00000426246 PIGXQ8TBF5 258 aa12.54□□□□□ -0.4
USP42-203ENST00000426246 FOXN4Q96NZ1 517 aa12.54□□□□□ -0.4
USP42-203ENST00000426246 LRRN3Q9H3W5 708 aa12.54□□□□□ -0.4
USP42-203ENST00000426246 SEMA4GQ9NTN9 838 aa12.54□□□□□ -0.4
USP42-203ENST00000426246 FBXL4Q9UKA2 621 aa12.54□□□□□ -0.4
USP42-203ENST00000426246 VPS13AQ96RL7 3174 aa12.54□□□□□ -0.4
USP42-203ENST00000426246 PRAMEF27A3QJZ7 478 aa12.53□□□□□ -0.4
USP42-203ENST00000426246 FAAHO00519 579 aa12.53□□□□□ -0.4
USP42-203ENST00000426246 MPZL2O60487 215 aa12.53□□□□□ -0.4
USP42-203ENST00000426246 SCG5P05408 212 aa12.53□□□□□ -0.4
USP42-203ENST00000426246 LAMP2P13473 410 aa12.53□□□□□ -0.4
USP42-203ENST00000426246 SHC1P29353 583 aa12.53□□□□□ -0.4
USP42-203ENST00000426246 LTBRP36941 435 aa12.53□□□□□ -0.4
USP42-203ENST00000426246 RPL6Q02878 288 aaKnown RBP12.53□□□□□ -0.4
USP42-203ENST00000426246 ZMYND11Q15326 602 aa12.53□□□□□ -0.4
USP42-203ENST00000426246 FAM111BQ6SJ93 734 aa12.53□□□□□ -0.4
USP42-203ENST00000426246 FBXL6Q8N531 539 aa12.53□□□□□ -0.4
USP42-203ENST00000426246 PATE1Q8WXA2 126 aa12.53□□□□□ -0.4
USP42-203ENST00000426246 SNAPC3Q92966 411 aa12.53□□□□□ -0.4
USP42-203ENST00000426246 PPP1R16AQ96I34 528 aa12.53□□□□□ -0.4
USP42-203ENST00000426246 RSPO3Q9BXY4 272 aaPredicted RBP12.53□□□□□ -0.4
USP42-203ENST00000426246 NANSQ9NR45 359 aa12.53□□□□□ -0.4
USP42-203ENST00000426246 FTSJ1Q9UET6 329 aa12.53□□□□□ -0.4
USP42-203ENST00000426246 WDR45Q9Y484 360 aa12.53□□□□□ -0.4
USP42-203ENST00000426246 CSF3P09919 207 aa12.53□□□□□ -0.4
USP42-203ENST00000426246 P2RY2P41231 377 aa12.53□□□□□ -0.4
USP42-203ENST00000426246 WNT4P56705 351 aa12.53□□□□□ -0.4
USP42-203ENST00000426246 CLDN12P56749 244 aa12.53□□□□□ -0.4
USP42-203ENST00000426246 PRKCDQ05655 676 aa12.53□□□□□ -0.4
USP42-203ENST00000426246 ZNF79Q15937 498 aa12.53□□□□□ -0.4
USP42-203ENST00000426246 KIAA1324Q6UXG2 1013 aaKnown RBP12.53□□□□□ -0.4
USP42-203ENST00000426246 ZNF793Q6ZN11 406 aa12.53□□□□□ -0.4
USP42-203ENST00000426246 OR8H3Q8N146 312 aa12.53□□□□□ -0.4
USP42-203ENST00000426246 ELSPBP1Q96BH3 223 aa12.53□□□□□ -0.4
USP42-203ENST00000426246 QRFPRQ96P65 431 aa12.53□□□□□ -0.4
USP42-203ENST00000426246 A0A0G2JMP0 313 aa12.52□□□□□ -0.4
USP42-203ENST00000426246 A0A0X1KG70 313 aa12.52□□□□□ -0.4
USP42-203ENST00000426246 COQ9O75208 318 aa12.52□□□□□ -0.4
USP42-203ENST00000426246 SOD1P00441 154 aa12.52□□□□□ -0.4
USP42-203ENST00000426246 PRKAR1AP10644 381 aa12.52□□□□□ -0.4
USP42-203ENST00000426246 CSNK2A2P19784 350 aaPredicted RBP12.52□□□□□ -0.4
USP42-203ENST00000426246 ATCAYQ86WG3 371 aa12.52□□□□□ -0.4
USP42-203ENST00000426246 SFTPA2Q8IWL1 248 aa12.52□□□□□ -0.4
USP42-203ENST00000426246 FAM98AQ8NCA5 519 aaKnown RBP12.52□□□□□ -0.4
USP42-203ENST00000426246 TMIEQ8NEW7 156 aa12.52□□□□□ -0.4
USP42-203ENST00000426246 OR4M2Q8NGB6 313 aa12.52□□□□□ -0.4
USP42-203ENST00000426246 TXNDC15Q96J42 360 aa12.52□□□□□ -0.4
USP42-203ENST00000426246 SLC6A18Q96N87 628 aa12.52□□□□□ -0.4
USP42-203ENST00000426246 NEUROD4Q9HD90 331 aa12.52□□□□□ -0.4
USP42-203ENST00000426246 ARHGEF17Q96PE2 2063 aaPredicted RBP12.52□□□□□ -0.4
USP42-203ENST00000426246 A0A1W2PR48 441 aa12.52□□□□□ -0.4
USP42-203ENST00000426246 SNTNA6NMZ2 147 aa12.52□□□□□ -0.4
USP42-203ENST00000426246 SSNA1O43805 119 aa12.52□□□□□ -0.4
USP42-203ENST00000426246 DNAJB6O75190 326 aa12.52□□□□□ -0.4
USP42-203ENST00000426246 ZNF24P17028 368 aa12.52□□□□□ -0.4
USP42-203ENST00000426246 BMP8BP34820 402 aa12.52□□□□□ -0.4
USP42-203ENST00000426246 CRYBB2P43320 205 aa12.52□□□□□ -0.4
USP42-203ENST00000426246 KIR2DL3P43628 341 aa12.52□□□□□ -0.4
USP42-203ENST00000426246 MAP2K3P46734 347 aa12.52□□□□□ -0.4
USP42-203ENST00000426246 KCNJ5P48544 419 aa12.52□□□□□ -0.4
USP42-203ENST00000426246 PGDP52209 483 aa12.52□□□□□ -0.4
USP42-203ENST00000426246 TAS2R38P59533 333 aa12.52□□□□□ -0.4
USP42-203ENST00000426246 ENPP2Q13822 863 aa12.52□□□□□ -0.4
USP42-203ENST00000426246 SFRP4Q6FHJ7 346 aaPredicted RBP12.52□□□□□ -0.4
USP42-203ENST00000426246 MSANTD1Q6ZTZ1 278 aa12.52□□□□□ -0.4
USP42-203ENST00000426246 ZNF438Q7Z4V0 828 aa12.52□□□□□ -0.4
USP42-203ENST00000426246 LINC01555Q8NAE3 123 aa12.52□□□□□ -0.4
USP42-203ENST00000426246 OR52E4Q8NGH9 312 aa12.52□□□□□ -0.4
USP42-203ENST00000426246 ITPKCQ96DU7 683 aa12.52□□□□□ -0.4
USP42-203ENST00000426246 CNRIP1Q96F85 164 aaPredicted RBP12.52□□□□□ -0.4
USP42-203ENST00000426246 PDXPQ96GD0 296 aa12.52□□□□□ -0.4
USP42-203ENST00000426246 AMDHD1Q96NU7 426 aa12.52□□□□□ -0.4
USP42-203ENST00000426246 SDHCQ99643 169 aaPredicted RBP12.52□□□□□ -0.4
USP42-203ENST00000426246 KATNB1Q9BVA0 655 aa12.52□□□□□ -0.4
USP42-203ENST00000426246 RSPH9Q9H1X1 276 aaPredicted RBP12.52□□□□□ -0.4
USP42-203ENST00000426246 ABCG5Q9H222 651 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms