RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 GKAP1Q5VSY0 366 aaPredicted RBP22.42■■□□□ 1.18
VEGFA-209ENST00000425836 SLC30A6Q6NXT4 461 aa22.42■■□□□ 1.18
VEGFA-209ENST00000425836 ANKS4BQ8N8V4 417 aa22.42■■□□□ 1.18
VEGFA-209ENST00000425836 RP9Q8TA86 221 aaKnown RBP22.42■■□□□ 1.18
VEGFA-209ENST00000425836 IL1RL2Q9HB29 575 aa22.42■■□□□ 1.18
VEGFA-209ENST00000425836 KLRF1Q9NZS2 232 aa22.42■■□□□ 1.18
VEGFA-209ENST00000425836 GMEB1Q9Y692 573 aa22.42■■□□□ 1.18
VEGFA-209ENST00000425836 COL6A6A6NMZ7 2263 aa22.41■■□□□ 1.18
VEGFA-209ENST00000425836 PRAMEF27A3QJZ7 478 aa22.41■■□□□ 1.18
VEGFA-209ENST00000425836 BBIP1A8MTZ0 92 aa22.41■■□□□ 1.18
VEGFA-209ENST00000425836 TRIM3O75382 744 aaPredicted RBP22.41■■□□□ 1.18
VEGFA-209ENST00000425836 AK1P00568 194 aa22.41■■□□□ 1.18
VEGFA-209ENST00000425836 ETFAP13804 333 aa22.41■■□□□ 1.18
VEGFA-209ENST00000425836 LCN1P31025 176 aa22.41■■□□□ 1.18
VEGFA-209ENST00000425836 EVI2BP34910 448 aa22.41■■□□□ 1.18
VEGFA-209ENST00000425836 CRATP43155 626 aa22.41■■□□□ 1.18
VEGFA-209ENST00000425836 ANXA11P50995 505 aaKnown RBP22.41■■□□□ 1.18
VEGFA-209ENST00000425836 FUT5Q11128 374 aa22.41■■□□□ 1.18
VEGFA-209ENST00000425836 GRAMD1BQ3KR37 738 aa22.41■■□□□ 1.18
VEGFA-209ENST00000425836 MMEL1Q495T6 779 aa22.41■■□□□ 1.18
VEGFA-209ENST00000425836 RUNDC3AQ59EK9 446 aa22.41■■□□□ 1.18
VEGFA-209ENST00000425836 ZNF324BQ6AW86 544 aaPredicted RBP22.41■■□□□ 1.18
VEGFA-209ENST00000425836 REP15Q6BDI9 236 aa22.41■■□□□ 1.18
VEGFA-209ENST00000425836 C16orf62Q7Z3J2 963 aa22.41■■□□□ 1.18
VEGFA-209ENST00000425836 POU5F2Q8N7G0 328 aa22.41■■□□□ 1.18
VEGFA-209ENST00000425836 OR4C3Q8NH37 302 aa22.41■■□□□ 1.18
VEGFA-209ENST00000425836 FAR1Q8WVX9 515 aa22.41■■□□□ 1.18
VEGFA-209ENST00000425836 CGREF1Q99674 301 aa22.41■■□□□ 1.18
VEGFA-209ENST00000425836 OSBPL11Q9BXB4 747 aa22.41■■□□□ 1.18
VEGFA-209ENST00000425836 NIPSNAP3AQ9UFN0 247 aaPredicted RBP22.41■■□□□ 1.18
VEGFA-209ENST00000425836 C2orf72A6NCS6 295 aa22.4■■□□□ 1.18
VEGFA-209ENST00000425836 COX4I1P13073 169 aa22.4■■□□□ 1.18
VEGFA-209ENST00000425836 ATP6V1C1P21283 382 aa22.4■■□□□ 1.18
VEGFA-209ENST00000425836 TLE1Q04724 770 aa22.4■■□□□ 1.18
VEGFA-209ENST00000425836 STX5Q13190 355 aa22.4■■□□□ 1.18
VEGFA-209ENST00000425836 RGNQ15493 299 aa22.4■■□□□ 1.18
VEGFA-209ENST00000425836 TTTY12Q9BZ98 90 aa22.4■■□□□ 1.18
VEGFA-209ENST00000425836 ABCG2Q9UNQ0 655 aa22.4■■□□□ 1.18
VEGFA-209ENST00000425836 LRRC3CA6NJW4 275 aa22.39■■□□□ 1.18
VEGFA-209ENST00000425836 ADAM10O14672 748 aa22.39■■□□□ 1.18
VEGFA-209ENST00000425836 MRASO14807 208 aa22.39■■□□□ 1.18
VEGFA-209ENST00000425836 SLC28A2O43868 658 aa22.39■■□□□ 1.18
VEGFA-209ENST00000425836 GLSO94925 669 aaPredicted RBP22.39■■□□□ 1.18
VEGFA-209ENST00000425836 PPIBP23284 216 aaKnown RBP22.39■■□□□ 1.18
VEGFA-209ENST00000425836 GAS1P54826 345 aa22.39■■□□□ 1.18
VEGFA-209ENST00000425836 FNDC7Q5VTL7 733 aa22.39■■□□□ 1.18
VEGFA-209ENST00000425836 APOOLQ6UXV4 268 aa22.39■■□□□ 1.18
VEGFA-209ENST00000425836 OLIG3Q7RTU3 272 aa22.39■■□□□ 1.18
VEGFA-209ENST00000425836 PACS2Q86VP3 889 aa22.39■■□□□ 1.18
VEGFA-209ENST00000425836 ROPN1LQ96C74 230 aa22.39■■□□□ 1.18
VEGFA-209ENST00000425836 TMEM41AQ96HV5 264 aa22.39■■□□□ 1.18
VEGFA-209ENST00000425836 JSRP1Q96MG2 331 aaPredicted RBP22.39■■□□□ 1.18
VEGFA-209ENST00000425836 ANKRD27Q96NW4 1050 aa22.39■■□□□ 1.18
VEGFA-209ENST00000425836 RAD21L1Q9H4I0 556 aa22.39■■□□□ 1.18
VEGFA-209ENST00000425836 IKZF5Q9H5V7 419 aa22.39■■□□□ 1.18
VEGFA-209ENST00000425836 ZFP64Q9NPA5 681 aa22.39■■□□□ 1.18
VEGFA-209ENST00000425836 AGPAT4Q9NRZ5 378 aa22.39■■□□□ 1.18
VEGFA-209ENST00000425836 OLAHQ9NV23 265 aa22.39■■□□□ 1.18
VEGFA-209ENST00000425836 BOKQ9UMX3 212 aaPredicted RBP22.39■■□□□ 1.18
VEGFA-209ENST00000425836 FCMRO60667 390 aa22.38■■□□□ 1.17
VEGFA-209ENST00000425836 STX11O75558 287 aa22.38■■□□□ 1.17
VEGFA-209ENST00000425836 ZIC2O95409 532 aaPredicted RBP22.38■■□□□ 1.17
VEGFA-209ENST00000425836 OXSR1O95747 527 aaPredicted RBP22.38■■□□□ 1.17
VEGFA-209ENST00000425836 NGFRP08138 427 aa22.38■■□□□ 1.17
VEGFA-209ENST00000425836 ZNF24P17028 368 aa22.38■■□□□ 1.17
VEGFA-209ENST00000425836 TBXA2RP21731 343 aa22.38■■□□□ 1.17
VEGFA-209ENST00000425836 MST1P26927 711 aa22.38■■□□□ 1.17
VEGFA-209ENST00000425836 ALDH6A1Q02252 535 aaKnown RBP22.38■■□□□ 1.17
VEGFA-209ENST00000425836 PLGLB1Q02325 96 aa22.38■■□□□ 1.17
VEGFA-209ENST00000425836 TRMT5Q32P41 509 aaKnown RBP22.38■■□□□ 1.17
VEGFA-209ENST00000425836 NR4A3Q92570 626 aa22.38■■□□□ 1.17
VEGFA-209ENST00000425836 LRRC37BQ96QE4 947 aa22.38■■□□□ 1.17
VEGFA-209ENST00000425836 CPPED1Q9BRF8 314 aaPredicted RBP22.38■■□□□ 1.17
VEGFA-209ENST00000425836 RTN4RQ9BZR6 473 aa22.38■■□□□ 1.17
VEGFA-209ENST00000425836 ZNF350Q9GZX5 532 aa22.38■■□□□ 1.17
VEGFA-209ENST00000425836 UBQLN4Q9NRR5 601 aa22.38■■□□□ 1.17
VEGFA-209ENST00000425836 LIPT1Q9Y234 373 aa22.38■■□□□ 1.17
VEGFA-209ENST00000425836 DCTN3O75935 186 aa22.38■■□□□ 1.17
VEGFA-209ENST00000425836 WISP2O76076 250 aa22.38■■□□□ 1.17
VEGFA-209ENST00000425836 DSTNP60981 165 aa22.38■■□□□ 1.17
VEGFA-209ENST00000425836 PPIAP62937 165 aaKnown RBP22.38■■□□□ 1.17
VEGFA-209ENST00000425836 FADDQ13158 208 aa22.38■■□□□ 1.17
VEGFA-209ENST00000425836 CAPRIN1Q14444 709 aaKnown RBP22.38■■□□□ 1.17
VEGFA-209ENST00000425836 SYPL1Q16563 259 aa22.38■■□□□ 1.17
VEGFA-209ENST00000425836 HYAL4Q2M3T9 481 aa22.38■■□□□ 1.17
VEGFA-209ENST00000425836 FLYWCH1Q4VC44 716 aa22.38■■□□□ 1.17
VEGFA-209ENST00000425836 AP1ARQ63HQ0 302 aa22.38■■□□□ 1.17
VEGFA-209ENST00000425836 MARCH3Q86UD3 253 aa22.38■■□□□ 1.17
VEGFA-209ENST00000425836 SIAH3Q8IW03 269 aa22.38■■□□□ 1.17
VEGFA-209ENST00000425836 C10orf111Q8N326 155 aa22.38■■□□□ 1.17
VEGFA-209ENST00000425836 ANKFN1Q8N957 763 aa22.38■■□□□ 1.17
VEGFA-209ENST00000425836 CCDC197Q8NCU1 140 aa22.38■■□□□ 1.17
VEGFA-209ENST00000425836 RCN3Q96D15 328 aa22.38■■□□□ 1.17
VEGFA-209ENST00000425836 ZNF597Q96LX8 424 aa22.38■■□□□ 1.17
VEGFA-209ENST00000425836 TRNT1Q96Q11 434 aaKnown RBP22.38■■□□□ 1.17
VEGFA-209ENST00000425836 WIF1Q9Y5W5 379 aa22.38■■□□□ 1.17
VEGFA-209ENST00000425836 NPIPA5A0A0B4J1W7 369 aa22.37■■□□□ 1.17
VEGFA-209ENST00000425836 NPIPA7E9PJI5 369 aa22.37■■□□□ 1.17
VEGFA-209ENST00000425836 SCO2O43819 266 aa22.37■■□□□ 1.17
VEGFA-209ENST00000425836 GUSBP08236 651 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms