RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 MAPK11Q15759 364 aa15.6■□□□□ 0.09
COL7A1-202ENST00000422991 SYPL1Q16563 259 aa15.6■□□□□ 0.09
COL7A1-202ENST00000422991 ZNF766Q5HY98 468 aa15.6■□□□□ 0.09
COL7A1-202ENST00000422991 GCNT6Q5T4J0 391 aa15.6■□□□□ 0.09
COL7A1-202ENST00000422991 SLC6A19Q695T7 634 aa15.6■□□□□ 0.09
COL7A1-202ENST00000422991 TMEM81Q6P7N7 255 aa15.6■□□□□ 0.09
COL7A1-202ENST00000422991 NET1Q7Z628 596 aaPredicted RBP15.6■□□□□ 0.09
COL7A1-202ENST00000422991 ANKFN1Q8N957 763 aa15.6■□□□□ 0.09
COL7A1-202ENST00000422991 FBXO27Q8NI29 283 aa15.6■□□□□ 0.09
COL7A1-202ENST00000422991 TMEM125Q96AQ2 219 aa15.6■□□□□ 0.09
COL7A1-202ENST00000422991 C5orf34Q96MH7 638 aa15.6■□□□□ 0.09
COL7A1-202ENST00000422991 TRNT1Q96Q11 434 aaKnown RBP15.6■□□□□ 0.09
COL7A1-202ENST00000422991 NODALQ96S42 347 aa15.6■□□□□ 0.09
COL7A1-202ENST00000422991 SH3GL1Q99961 368 aa15.6■□□□□ 0.09
COL7A1-202ENST00000422991 HOPXQ9BPY8 73 aaPredicted RBP15.6■□□□□ 0.09
COL7A1-202ENST00000422991 MFRPQ9BY79 579 aa15.6■□□□□ 0.09
COL7A1-202ENST00000422991 FLRT3Q9NZU0 649 aa15.6■□□□□ 0.09
COL7A1-202ENST00000422991 CNOT11Q9UKZ1 510 aaKnown RBP15.6■□□□□ 0.09
COL7A1-202ENST00000422991 B3GNT3Q9Y2A9 372 aa15.6■□□□□ 0.09
COL7A1-202ENST00000422991 PCDHGB6Q9Y5F9 930 aa15.6■□□□□ 0.09
COL7A1-202ENST00000422991 HS6ST1O60243 411 aa15.59■□□□□ 0.09
COL7A1-202ENST00000422991 STX11O75558 287 aa15.59■□□□□ 0.09
COL7A1-202ENST00000422991 UTS2O95399 124 aa15.59■□□□□ 0.09
COL7A1-202ENST00000422991 ZIC2O95409 532 aaPredicted RBP15.59■□□□□ 0.09
COL7A1-202ENST00000422991 SP1P08047 785 aa15.59■□□□□ 0.09
COL7A1-202ENST00000422991 CHRM4P08173 479 aa15.59■□□□□ 0.09
COL7A1-202ENST00000422991 GUSBP08236 651 aa15.59■□□□□ 0.09
COL7A1-202ENST00000422991 TFPTP0C1Z6 253 aa15.59■□□□□ 0.09
COL7A1-202ENST00000422991 ARAFP10398 606 aa15.59■□□□□ 0.09
COL7A1-202ENST00000422991 ATP6V1C1P21283 382 aa15.59■□□□□ 0.09
COL7A1-202ENST00000422991 RPP38P78345 283 aaKnown RBP15.59■□□□□ 0.09
COL7A1-202ENST00000422991 ADRM1Q16186 407 aa15.59■□□□□ 0.09
COL7A1-202ENST00000422991 GRAMD1BQ3KR37 738 aa15.59■□□□□ 0.09
COL7A1-202ENST00000422991 SLC22A10Q63ZE4 541 aa15.59■□□□□ 0.09
COL7A1-202ENST00000422991 SLC25A25Q6KCM7 469 aa15.59■□□□□ 0.09
COL7A1-202ENST00000422991 FRRS1Q6ZNA5 592 aa15.59■□□□□ 0.09
COL7A1-202ENST00000422991 OLIG3Q7RTU3 272 aa15.59■□□□□ 0.09
COL7A1-202ENST00000422991 SLC38A5Q8WUX1 472 aa15.59■□□□□ 0.09
COL7A1-202ENST00000422991 MAL2Q969L2 176 aa15.59■□□□□ 0.09
COL7A1-202ENST00000422991 TMCO6Q96DC7 493 aa15.59■□□□□ 0.09
COL7A1-202ENST00000422991 TMEM38AQ9H6F2 299 aa15.59■□□□□ 0.09
COL7A1-202ENST00000422991 KLHL1Q9NR64 748 aa15.59■□□□□ 0.09
COL7A1-202ENST00000422991 POLE3Q9NRF9 147 aa15.59■□□□□ 0.09
COL7A1-202ENST00000422991 SACM1LQ9NTJ5 587 aa15.59■□□□□ 0.09
COL7A1-202ENST00000422991 CNIH4Q9P003 139 aa15.59■□□□□ 0.09
COL7A1-202ENST00000422991 ABCG2Q9UNQ0 655 aa15.59■□□□□ 0.09
COL7A1-202ENST00000422991 KLF13Q9Y2Y9 288 aaPredicted RBP15.59■□□□□ 0.09
COL7A1-202ENST00000422991 A0A0G2JMM0 328 aa15.58■□□□□ 0.08
COL7A1-202ENST00000422991 A0A1W2PPB8 328 aa15.58■□□□□ 0.08
COL7A1-202ENST00000422991 A0A1W2PRS3 328 aa15.58■□□□□ 0.08
COL7A1-202ENST00000422991 PRAMEF25A6NGN4 478 aa15.58■□□□□ 0.08
COL7A1-202ENST00000422991 KIR3DP1A8MWS1 328 aa15.58■□□□□ 0.08
COL7A1-202ENST00000422991 NPIPB9F8W1W9 429 aa15.58■□□□□ 0.08
COL7A1-202ENST00000422991 SLC28A2O43868 658 aa15.58■□□□□ 0.08
COL7A1-202ENST00000422991 KIAA0513O60268 411 aa15.58■□□□□ 0.08
COL7A1-202ENST00000422991 H6PDO95479 791 aa15.58■□□□□ 0.08
COL7A1-202ENST00000422991 P04436 131 aa15.58■□□□□ 0.08
COL7A1-202ENST00000422991 BCHEP06276 602 aa15.58■□□□□ 0.08
COL7A1-202ENST00000422991 NGFRP08138 427 aa15.58■□□□□ 0.08
COL7A1-202ENST00000422991 NR2F1P10589 423 aa15.58■□□□□ 0.08
COL7A1-202ENST00000422991 EVI2BP34910 448 aa15.58■□□□□ 0.08
COL7A1-202ENST00000422991 CASP3P42574 277 aa15.58■□□□□ 0.08
COL7A1-202ENST00000422991 GZMMP51124 257 aa15.58■□□□□ 0.08
COL7A1-202ENST00000422991 SLC7A2P52569 658 aa15.58■□□□□ 0.08
COL7A1-202ENST00000422991 PSME3P61289 254 aa15.58■□□□□ 0.08
COL7A1-202ENST00000422991 HPCAP84074 193 aa15.58■□□□□ 0.08
COL7A1-202ENST00000422991 CYP51A1Q16850 503 aa15.58■□□□□ 0.08
COL7A1-202ENST00000422991 NADK2Q4G0N4 442 aa15.58■□□□□ 0.08
COL7A1-202ENST00000422991 FLYWCH1Q4VC44 716 aa15.58■□□□□ 0.08
COL7A1-202ENST00000422991 GPAT3Q53EU6 434 aa15.58■□□□□ 0.08
COL7A1-202ENST00000422991 AP1ARQ63HQ0 302 aa15.58■□□□□ 0.08
COL7A1-202ENST00000422991 BICRALQ6AI39 1079 aa15.58■□□□□ 0.08
COL7A1-202ENST00000422991 TYW3Q6IPR3 259 aaKnown RBP15.58■□□□□ 0.08
COL7A1-202ENST00000422991 C6orf89Q6UWU4 347 aa15.58■□□□□ 0.08
COL7A1-202ENST00000422991 LRRC74BQ6ZQY2 392 aa15.58■□□□□ 0.08
COL7A1-202ENST00000422991 SERPINA11Q86U17 422 aa15.58■□□□□ 0.08
COL7A1-202ENST00000422991 CALHM3Q86XJ0 350 aa15.58■□□□□ 0.08
COL7A1-202ENST00000422991 PTOV1Q86YD1 416 aa15.58■□□□□ 0.08
COL7A1-202ENST00000422991 SLC15A3Q8IY34 581 aa15.58■□□□□ 0.08
COL7A1-202ENST00000422991 TMEM178AQ8NBL3 297 aa15.58■□□□□ 0.08
COL7A1-202ENST00000422991 OR10A6Q8NH74 314 aa15.58■□□□□ 0.08
COL7A1-202ENST00000422991 GRHL3Q8TE85 626 aa15.58■□□□□ 0.08
COL7A1-202ENST00000422991 PNPLA2Q96AD5 504 aa15.58■□□□□ 0.08
COL7A1-202ENST00000422991 NTNG2Q96CW9 530 aa15.58■□□□□ 0.08
COL7A1-202ENST00000422991 SPATA9Q9BWV2 254 aa15.58■□□□□ 0.08
COL7A1-202ENST00000422991 SAP130Q9H0E3 1048 aa15.58■□□□□ 0.08
COL7A1-202ENST00000422991 SLC38A1Q9H2H9 487 aa15.58■□□□□ 0.08
COL7A1-202ENST00000422991 RUBCNLQ9H714 662 aa15.58■□□□□ 0.08
COL7A1-202ENST00000422991 METTL7AQ9H8H3 244 aa15.58■□□□□ 0.08
COL7A1-202ENST00000422991 PROK2Q9HC23 129 aa15.58■□□□□ 0.08
COL7A1-202ENST00000422991 DEPPQ9NTK1 212 aa15.58■□□□□ 0.08
COL7A1-202ENST00000422991 CMTM6Q9NX76 183 aa15.58■□□□□ 0.08
COL7A1-202ENST00000422991 ABCD2Q9UBJ2 740 aa15.58■□□□□ 0.08
COL7A1-202ENST00000422991 WDR45Q9Y484 360 aa15.58■□□□□ 0.08
COL7A1-202ENST00000422991 PCDHGA10Q9Y5H3 936 aa15.58■□□□□ 0.08
COL7A1-202ENST00000422991 NPIPA5A0A0B4J1W7 369 aa15.57■□□□□ 0.08
COL7A1-202ENST00000422991 ANKRD33BA6NCL7 494 aa15.57■□□□□ 0.08
COL7A1-202ENST00000422991 TMEM247A6NEH6 219 aa15.57■□□□□ 0.08
COL7A1-202ENST00000422991 NPIPA7E9PJI5 369 aa15.57■□□□□ 0.08
COL7A1-202ENST00000422991 NME4O00746 187 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms