RNA–Protein interactions for RNA: ENST00000420973.5

CHRD-204, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,492 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-204ENST00000420973 DNAJB8Q8NHS0 232 aa13.66□□□□□ -0.22
CHRD-204ENST00000420973 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.66□□□□□ -0.22
CHRD-204ENST00000420973 SPSB2Q99619 263 aa13.66□□□□□ -0.22
CHRD-204ENST00000420973 DPH7Q9BTV6 452 aa13.66□□□□□ -0.22
CHRD-204ENST00000420973 TPT1P8Q9HAU6 139 aa13.66□□□□□ -0.22
CHRD-204ENST00000420973 RDH14Q9HBH5 336 aa13.66□□□□□ -0.22
CHRD-204ENST00000420973 TRPC4Q9UBN4 977 aa13.66□□□□□ -0.22
CHRD-204ENST00000420973 GULP1Q9UBP9 304 aa13.66□□□□□ -0.22
CHRD-204ENST00000420973 SSR3Q9UNL2 185 aa13.66□□□□□ -0.22
CHRD-204ENST00000420973 MAP1BP46821 2468 aaKnown RBP13.66□□□□□ -0.22
CHRD-204ENST00000420973 PLXNA4Q9HCM2 1894 aa13.66□□□□□ -0.22
CHRD-204ENST00000420973 ANKRD28O15084 1053 aa13.66□□□□□ -0.22
CHRD-204ENST00000420973 AKAP8O43823 692 aaKnown RBP13.66□□□□□ -0.22
CHRD-204ENST00000420973 MPC2O95563 127 aa13.66□□□□□ -0.22
CHRD-204ENST00000420973 ASGR2P07307 311 aa13.66□□□□□ -0.22
CHRD-204ENST00000420973 SRPRAP08240 638 aaKnown RBP13.66□□□□□ -0.22
CHRD-204ENST00000420973 ANXA3P12429 323 aa13.66□□□□□ -0.22
CHRD-204ENST00000420973 OPRD1P41143 372 aa13.66□□□□□ -0.22
CHRD-204ENST00000420973 PXNP49023 591 aaPredicted RBP13.66□□□□□ -0.22
CHRD-204ENST00000420973 DCDC1P59894 354 aa13.66□□□□□ -0.22
CHRD-204ENST00000420973 RAB8AP61006 207 aa13.66□□□□□ -0.22
CHRD-204ENST00000420973 SLC3A1Q07837 685 aa13.66□□□□□ -0.22
CHRD-204ENST00000420973 ZNF79Q15937 498 aa13.66□□□□□ -0.22
CHRD-204ENST00000420973 ZNF852Q6ZMS4 543 aa13.66□□□□□ -0.22
CHRD-204ENST00000420973 FTMTQ8N4E7 242 aa13.66□□□□□ -0.22
CHRD-204ENST00000420973 ATP6V1C2Q8NEY4 427 aa13.66□□□□□ -0.22
CHRD-204ENST00000420973 OR1M1Q8NGA1 313 aa13.66□□□□□ -0.22
CHRD-204ENST00000420973 HMGB4Q8WW32 186 aa13.66□□□□□ -0.22
CHRD-204ENST00000420973 RAB8BQ92930 207 aa13.66□□□□□ -0.22
CHRD-204ENST00000420973 VRK1Q99986 396 aaPredicted RBP13.66□□□□□ -0.22
CHRD-204ENST00000420973 RHCGQ9UBD6 479 aa13.66□□□□□ -0.22
CHRD-204ENST00000420973 FZD4Q9ULV1 537 aa13.66□□□□□ -0.22
CHRD-204ENST00000420973 TCRBV5S2A0A599 114 aa13.65□□□□□ -0.22
CHRD-204ENST00000420973 GABRR3A8MPY1 467 aa13.65□□□□□ -0.22
CHRD-204ENST00000420973 GFYI3L273 518 aa13.65□□□□□ -0.22
CHRD-204ENST00000420973 BRINP1O60477 761 aa13.65□□□□□ -0.22
CHRD-204ENST00000420973 TPST2O60704 377 aa13.65□□□□□ -0.22
CHRD-204ENST00000420973 HPRP00739 348 aa13.65□□□□□ -0.22
CHRD-204ENST00000420973 HBQ1P09105 142 aa13.65□□□□□ -0.22
CHRD-204ENST00000420973 ETFAP13804 333 aa13.65□□□□□ -0.22
CHRD-204ENST00000420973 RNF144AP50876 292 aaPredicted RBP13.65□□□□□ -0.22
CHRD-204ENST00000420973 CLDN8P56748 225 aa13.65□□□□□ -0.22
CHRD-204ENST00000420973 TAP2Q03519 686 aa13.65□□□□□ -0.22
CHRD-204ENST00000420973 FAM46CQ5VWP2 391 aa13.65□□□□□ -0.22
CHRD-204ENST00000420973 SLC25A25Q6KCM7 469 aa13.65□□□□□ -0.22
CHRD-204ENST00000420973 HACD2Q6Y1H2 254 aa13.65□□□□□ -0.22
CHRD-204ENST00000420973 COMMD6Q7Z4G1 85 aa13.65□□□□□ -0.22
CHRD-204ENST00000420973 ZNF655Q8N720 491 aaPredicted RBP13.65□□□□□ -0.22
CHRD-204ENST00000420973 WDSUB1Q8N9V3 476 aa13.65□□□□□ -0.22
CHRD-204ENST00000420973 OR11H4Q8NGC9 324 aa13.65□□□□□ -0.22
CHRD-204ENST00000420973 TSACCQ96A04 125 aaPredicted RBP13.65□□□□□ -0.22
CHRD-204ENST00000420973 RAD51AP1Q96B01 352 aa13.65□□□□□ -0.22
CHRD-204ENST00000420973 PPCDCQ96CD2 204 aa13.65□□□□□ -0.22
CHRD-204ENST00000420973 CMTM7Q96FZ5 175 aa13.65□□□□□ -0.22
CHRD-204ENST00000420973 CMTM3Q96MX0 182 aa13.65□□□□□ -0.22
CHRD-204ENST00000420973 ZNF436Q9C0F3 470 aaPredicted RBP13.65□□□□□ -0.22
CHRD-204ENST00000420973 GPN3Q9UHW5 284 aaPredicted RBP13.65□□□□□ -0.22
CHRD-204ENST00000420973 FBXO10Q9UK96 956 aa13.65□□□□□ -0.22
CHRD-204ENST00000420973 CCL27Q9Y4X3 112 aa13.65□□□□□ -0.22
CHRD-204ENST00000420973 M0R082 166 aa13.65□□□□□ -0.22
CHRD-204ENST00000420973 HOXB2P14652 356 aa13.65□□□□□ -0.22
CHRD-204ENST00000420973 IDH2P48735 452 aaKnown RBP13.65□□□□□ -0.22
CHRD-204ENST00000420973 SNRPEP62304 92 aaKnown RBP13.65□□□□□ -0.22
CHRD-204ENST00000420973 MLLT1Q03111 559 aaPredicted RBP13.65□□□□□ -0.22
CHRD-204ENST00000420973 TIMM50Q3ZCQ8 353 aa13.65□□□□□ -0.22
CHRD-204ENST00000420973 ZCCHC12Q6PEW1 402 aa13.65□□□□□ -0.22
CHRD-204ENST00000420973 TMIGD1Q6UXZ0 262 aa13.65□□□□□ -0.22
CHRD-204ENST00000420973 LRRTM4Q86VH4 590 aa13.65□□□□□ -0.22
CHRD-204ENST00000420973 ZDHHC21Q8IVQ6 265 aa13.65□□□□□ -0.22
CHRD-204ENST00000420973 TTC29Q8NA56 475 aaPredicted RBP13.65□□□□□ -0.22
CHRD-204ENST00000420973 FCRL4Q96PJ5 515 aa13.65□□□□□ -0.22
CHRD-204ENST00000420973 FAM83CQ9BQN1 747 aa13.65□□□□□ -0.22
CHRD-204ENST00000420973 PTDSS2Q9BVG9 487 aa13.65□□□□□ -0.22
CHRD-204ENST00000420973 CLMPQ9H6B4 373 aa13.65□□□□□ -0.22
CHRD-204ENST00000420973 EQTNQ9NQ60 294 aa13.65□□□□□ -0.22
CHRD-204ENST00000420973 SAMHD1Q9Y3Z3 626 aaKnown RBP13.65□□□□□ -0.22
CHRD-204ENST00000420973 CMAHPQ9Y471 501 aa13.65□□□□□ -0.22
CHRD-204ENST00000420973 ARGFXA6NJG6 315 aa13.65□□□□□ -0.23
CHRD-204ENST00000420973 DNASE2O00115 360 aaPredicted RBP13.65□□□□□ -0.23
CHRD-204ENST00000420973 SLCO2B1O94956 709 aa13.65□□□□□ -0.23
CHRD-204ENST00000420973 AP2A2O94973 939 aa13.65□□□□□ -0.23
CHRD-204ENST00000420973 ADRB1P08588 477 aa13.65□□□□□ -0.23
CHRD-204ENST00000420973 PRPS2P11908 318 aa13.65□□□□□ -0.23
CHRD-204ENST00000420973 ACSL1P33121 698 aa13.65□□□□□ -0.23
CHRD-204ENST00000420973 RYKP34925 604 aa13.65□□□□□ -0.23
CHRD-204ENST00000420973 SLC6A12P48065 614 aa13.65□□□□□ -0.23
CHRD-204ENST00000420973 TNFRSF17Q02223 184 aa13.65□□□□□ -0.23
CHRD-204ENST00000420973 SMCO1Q147U7 214 aa13.65□□□□□ -0.23
CHRD-204ENST00000420973 ENPP7Q6UWV6 458 aa13.65□□□□□ -0.23
CHRD-204ENST00000420973 SLC46A3Q7Z3Q1 461 aa13.65□□□□□ -0.23
CHRD-204ENST00000420973 TRMT10AQ8TBZ6 339 aaKnown RBP13.65□□□□□ -0.23
CHRD-204ENST00000420973 SNX33Q8WV41 574 aa13.65□□□□□ -0.23
CHRD-204ENST00000420973 FCGR1BQ92637 280 aa13.65□□□□□ -0.23
CHRD-204ENST00000420973 ERMAPQ96PL5 475 aaPredicted RBP13.65□□□□□ -0.23
CHRD-204ENST00000420973 CHIAQ9BZP6 476 aa13.65□□□□□ -0.23
CHRD-204ENST00000420973 RUVBL1Q9Y265 456 aaKnown RBP13.65□□□□□ -0.23
CHRD-204ENST00000420973 AGAP14A8MT82 685 aa13.64□□□□□ -0.23
CHRD-204ENST00000420973 UPK1AO00322 258 aa13.64□□□□□ -0.23
CHRD-204ENST00000420973 YY2O15391 372 aa13.64□□□□□ -0.23
CHRD-204ENST00000420973 CCNB2O95067 398 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms