RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 ITGA2P17301 1181 aa13.18□□□□□ -0.3
SHMT1P1-201ENST00000419974 FASP25445 335 aa13.18□□□□□ -0.3
SHMT1P1-201ENST00000419974 SOX11P35716 441 aa13.18□□□□□ -0.3
SHMT1P1-201ENST00000419974 ATP6AP1Q15904 470 aa13.18□□□□□ -0.3
SHMT1P1-201ENST00000419974 DECR1Q16698 335 aa13.18□□□□□ -0.3
SHMT1P1-201ENST00000419974 DUSP7Q16829 419 aa13.18□□□□□ -0.3
SHMT1P1-201ENST00000419974 GLIPR1L2Q4G1C9 344 aa13.18□□□□□ -0.3
SHMT1P1-201ENST00000419974 CRTC2Q53ET0 693 aaPredicted RBP13.18□□□□□ -0.3
SHMT1P1-201ENST00000419974 IFI44LQ53G44 452 aa13.18□□□□□ -0.3
SHMT1P1-201ENST00000419974 RNF220Q5VTB9 566 aa13.18□□□□□ -0.3
SHMT1P1-201ENST00000419974 MARCH9Q86YJ5 346 aa13.18□□□□□ -0.3
SHMT1P1-201ENST00000419974 GRAMD2AQ8IUY3 354 aa13.18□□□□□ -0.3
SHMT1P1-201ENST00000419974 SLC44A2Q8IWA5 706 aaPredicted RBP13.18□□□□□ -0.3
SHMT1P1-201ENST00000419974 CMIPQ8IY22 773 aa13.18□□□□□ -0.3
SHMT1P1-201ENST00000419974 PEX5LQ8IYB4 626 aa13.18□□□□□ -0.3
SHMT1P1-201ENST00000419974 LILRA2Q8N149 483 aa13.18□□□□□ -0.3
SHMT1P1-201ENST00000419974 FAM86B1Q8N7N1 296 aa13.18□□□□□ -0.3
SHMT1P1-201ENST00000419974 ZNF321PQ8N8H1 164 aa13.18□□□□□ -0.3
SHMT1P1-201ENST00000419974 FBXO30Q8TB52 745 aa13.18□□□□□ -0.3
SHMT1P1-201ENST00000419974 NXPE2Q96DL1 559 aa13.18□□□□□ -0.3
SHMT1P1-201ENST00000419974 SLC47A1Q96FL8 570 aa13.18□□□□□ -0.3
SHMT1P1-201ENST00000419974 HSH2DQ96JZ2 352 aa13.18□□□□□ -0.3
SHMT1P1-201ENST00000419974 COL21A1Q96P44 957 aa13.18□□□□□ -0.3
SHMT1P1-201ENST00000419974 RSPO3Q9BXY4 272 aaPredicted RBP13.18□□□□□ -0.3
SHMT1P1-201ENST00000419974 C8orf4Q9NR00 106 aa13.18□□□□□ -0.3
SHMT1P1-201ENST00000419974 NKX1-2Q9UD57 310 aaPredicted RBP13.18□□□□□ -0.3
SHMT1P1-201ENST00000419974 SEC14L3Q9UDX4 400 aa13.18□□□□□ -0.3
SHMT1P1-201ENST00000419974 ZNF232Q9UNY5 417 aa13.18□□□□□ -0.3
SHMT1P1-201ENST00000419974 A8MUA0 341 aa13.17□□□□□ -0.3
SHMT1P1-201ENST00000419974 PEX1O43933 1283 aa13.17□□□□□ -0.3
SHMT1P1-201ENST00000419974 ABCB7O75027 752 aa13.17□□□□□ -0.3
SHMT1P1-201ENST00000419974 DEAF1O75398 565 aaPredicted RBP13.17□□□□□ -0.3
SHMT1P1-201ENST00000419974 ZFAND5O76080 213 aa13.17□□□□□ -0.3
SHMT1P1-201ENST00000419974 HPP00738 406 aa13.17□□□□□ -0.3
SHMT1P1-201ENST00000419974 ALPPP05187 535 aa13.17□□□□□ -0.3
SHMT1P1-201ENST00000419974 FESP07332 822 aa13.17□□□□□ -0.3
SHMT1P1-201ENST00000419974 LIPCP11150 499 aa13.17□□□□□ -0.3
SHMT1P1-201ENST00000419974 NID1P14543 1247 aa13.17□□□□□ -0.3
SHMT1P1-201ENST00000419974 AQP1P29972 269 aa13.17□□□□□ -0.3
SHMT1P1-201ENST00000419974 LARS2Q15031 903 aaKnown RBP13.17□□□□□ -0.3
SHMT1P1-201ENST00000419974 PPP1R32Q7Z5V6 425 aa13.17□□□□□ -0.3
SHMT1P1-201ENST00000419974 BCORP1Q8N888 145 aa13.17□□□□□ -0.3
SHMT1P1-201ENST00000419974 GPR32P1Q8NGA4 272 aa13.17□□□□□ -0.3
SHMT1P1-201ENST00000419974 ADAMTS17Q8TE56 1095 aa13.17□□□□□ -0.3
SHMT1P1-201ENST00000419974 PIK3R3Q92569 461 aa13.17□□□□□ -0.3
SHMT1P1-201ENST00000419974 DIO2Q92813 273 aa13.17□□□□□ -0.3
SHMT1P1-201ENST00000419974 CENPNQ96H22 339 aaPredicted RBP13.17□□□□□ -0.3
SHMT1P1-201ENST00000419974 ZNF347Q96SE7 839 aa13.17□□□□□ -0.3
SHMT1P1-201ENST00000419974 BDH2Q9BUT1 245 aa13.17□□□□□ -0.3
SHMT1P1-201ENST00000419974 OSBPL10Q9BXB5 764 aa13.17□□□□□ -0.3
SHMT1P1-201ENST00000419974 NXF5Q9H1B4 397 aaKnown RBP13.17□□□□□ -0.3
SHMT1P1-201ENST00000419974 DNAJB9Q9UBS3 223 aa13.17□□□□□ -0.3
SHMT1P1-201ENST00000419974 CNOT11Q9UKZ1 510 aaKnown RBP13.17□□□□□ -0.3
SHMT1P1-201ENST00000419974 AURKCQ9UQB9 309 aa13.17□□□□□ -0.3
SHMT1P1-201ENST00000419974 KIF26BQ2KJY2 2108 aa13.17□□□□□ -0.3
SHMT1P1-201ENST00000419974 URB1O60287 2271 aaKnown RBP13.17□□□□□ -0.3
SHMT1P1-201ENST00000419974 A0A087WV48 116 aa13.16□□□□□ -0.3
SHMT1P1-201ENST00000419974 GXYLT2A0PJZ3 443 aa13.16□□□□□ -0.3
SHMT1P1-201ENST00000419974 OR6C70A6NIJ9 312 aa13.16□□□□□ -0.3
SHMT1P1-201ENST00000419974 TMEM200CA6NKL6 621 aa13.16□□□□□ -0.3
SHMT1P1-201ENST00000419974 TSPAN2O60636 221 aa13.16□□□□□ -0.3
SHMT1P1-201ENST00000419974 UGT2B17O75795 530 aa13.16□□□□□ -0.3
SHMT1P1-201ENST00000419974 ZNF682O95780 498 aa13.16□□□□□ -0.3
SHMT1P1-201ENST00000419974 FABP3P05413 133 aa13.16□□□□□ -0.3
SHMT1P1-201ENST00000419974 ENDOUP21128 410 aaKnown RBP13.16□□□□□ -0.3
SHMT1P1-201ENST00000419974 DLSTP36957 453 aa13.16□□□□□ -0.3
SHMT1P1-201ENST00000419974 HMGA2P52926 109 aa13.16□□□□□ -0.3
SHMT1P1-201ENST00000419974 PNLIPRP2P54317 469 aa13.16□□□□□ -0.3
SHMT1P1-201ENST00000419974 ATP12AP54707 1039 aa13.16□□□□□ -0.3
SHMT1P1-201ENST00000419974 FOXL2P58012 376 aa13.16□□□□□ -0.3
SHMT1P1-201ENST00000419974 EEF1A1P68104 462 aaKnown RBP13.16□□□□□ -0.3
SHMT1P1-201ENST00000419974 LIN52Q52LA3 116 aa13.16□□□□□ -0.3
SHMT1P1-201ENST00000419974 EIPR1Q53HC9 387 aa13.16□□□□□ -0.3
SHMT1P1-201ENST00000419974 RPS26P11Q5JNZ5 115 aaPredicted RBP13.16□□□□□ -0.3
SHMT1P1-201ENST00000419974 HLA-DQA1Q5Y7H0 255 aa13.16□□□□□ -0.3
SHMT1P1-201ENST00000419974 FAAH2Q6GMR7 532 aa13.16□□□□□ -0.3
SHMT1P1-201ENST00000419974 H3F3CQ6NXT2 135 aa13.16□□□□□ -0.3
SHMT1P1-201ENST00000419974 WDR53Q7Z5U6 358 aaPredicted RBP13.16□□□□□ -0.3
SHMT1P1-201ENST00000419974 VTCN1Q7Z7D3 282 aa13.16□□□□□ -0.3
SHMT1P1-201ENST00000419974 DND1Q8IYX4 353 aaKnown RBP13.16□□□□□ -0.3
SHMT1P1-201ENST00000419974 SLC34A3Q8N130 599 aa13.16□□□□□ -0.3
SHMT1P1-201ENST00000419974 OR52P1PQ8NH57 321 aa13.16□□□□□ -0.3
SHMT1P1-201ENST00000419974 DOK4Q8TEW6 326 aa13.16□□□□□ -0.3
SHMT1P1-201ENST00000419974 RNF138Q8WVD3 245 aa13.16□□□□□ -0.3
SHMT1P1-201ENST00000419974 NR4A3Q92570 626 aa13.16□□□□□ -0.3
SHMT1P1-201ENST00000419974 SEPHS2Q99611 448 aa13.16□□□□□ -0.3
SHMT1P1-201ENST00000419974 POLR2J2Q9GZM3 115 aaKnown RBP13.16□□□□□ -0.3
SHMT1P1-201ENST00000419974 POLR2J3Q9H1A7 115 aaKnown RBP13.16□□□□□ -0.3
SHMT1P1-201ENST00000419974 ARMC7Q9H6L4 198 aa13.16□□□□□ -0.3
SHMT1P1-201ENST00000419974 NDUFAF4Q9P032 175 aa13.16□□□□□ -0.3
SHMT1P1-201ENST00000419974 ACAD8Q9UKU7 415 aa13.16□□□□□ -0.3
SHMT1P1-201ENST00000419974 OR10H1Q9Y4A9 318 aa13.16□□□□□ -0.3
SHMT1P1-201ENST00000419974 IGHV3-20A0A0C4DH32 117 aa13.15□□□□□ -0.3
SHMT1P1-201ENST00000419974 LOC101059948A0A1B0GTJ6 334 aa13.15□□□□□ -0.3
SHMT1P1-201ENST00000419974 A0A1W2PQD3 144 aa13.15□□□□□ -0.3
SHMT1P1-201ENST00000419974 H0Y3Z8 333 aa13.15□□□□□ -0.3
SHMT1P1-201ENST00000419974 CLOCKO15516 846 aa13.15□□□□□ -0.3
SHMT1P1-201ENST00000419974 FMO6PO60774 539 aa13.15□□□□□ -0.3
SHMT1P1-201ENST00000419974 NME6O75414 186 aaPredicted RBP13.15□□□□□ -0.3
SHMT1P1-201ENST00000419974 SEC24DO94855 1032 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms