RNA–Protein interactions for RNA: ENST00000419582.5

PTPA-213, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-213ENST00000419582 KRT20P35900 424 aa13.36□□□□□ -0.27
PTPA-213ENST00000419582 PHEXP78562 749 aa13.36□□□□□ -0.27
PTPA-213ENST00000419582 IRF9Q00978 393 aa13.36□□□□□ -0.27
PTPA-213ENST00000419582 DDX39BQ13838 428 aaKnown RBP13.36□□□□□ -0.27
PTPA-213ENST00000419582 MORF4L2Q15014 288 aa13.36□□□□□ -0.27
PTPA-213ENST00000419582 RNASEH2BQ5TBB1 312 aaKnown RBP13.36□□□□□ -0.27
PTPA-213ENST00000419582 ZNF544Q6NX49 715 aa13.36□□□□□ -0.27
PTPA-213ENST00000419582 SLC48A1Q6P1K1 146 aa13.36□□□□□ -0.27
PTPA-213ENST00000419582 TRMT10BQ6PF06 316 aaKnown RBP13.36□□□□□ -0.27
PTPA-213ENST00000419582 GALNT10Q86SR1 603 aa13.36□□□□□ -0.27
PTPA-213ENST00000419582 WDR75Q8IWA0 830 aaKnown RBP13.36□□□□□ -0.27
PTPA-213ENST00000419582 FBXL14Q8N1E6 418 aa13.36□□□□□ -0.27
PTPA-213ENST00000419582 PPM1NQ8N819 430 aa13.36□□□□□ -0.27
PTPA-213ENST00000419582 ANP32BQ92688 251 aaKnown RBP13.36□□□□□ -0.27
PTPA-213ENST00000419582 VSTM2LQ96N03 204 aa13.36□□□□□ -0.27
PTPA-213ENST00000419582 BHLHE41Q9C0J9 482 aaPredicted RBP13.36□□□□□ -0.27
PTPA-213ENST00000419582 PCDHA9Q9Y5H5 950 aa13.36□□□□□ -0.27
PTPA-213ENST00000419582 PSAT1Q9Y617 370 aa13.36□□□□□ -0.27
PTPA-213ENST00000419582 C1orf226A1L170 272 aa13.35□□□□□ -0.27
PTPA-213ENST00000419582 EIF1AYO14602 144 aaKnown RBP13.35□□□□□ -0.27
PTPA-213ENST00000419582 ABCD4O14678 606 aa13.35□□□□□ -0.27
PTPA-213ENST00000419582 SMAD9O15198 467 aaKnown RBP13.35□□□□□ -0.27
PTPA-213ENST00000419582 UGDHO60701 494 aa13.35□□□□□ -0.27
PTPA-213ENST00000419582 SYNGR4O95473 234 aa13.35□□□□□ -0.27
PTPA-213ENST00000419582 CD1DP15813 335 aa13.35□□□□□ -0.27
PTPA-213ENST00000419582 ZNF17P17021 662 aa13.35□□□□□ -0.27
PTPA-213ENST00000419582 ZNF23P17027 643 aa13.35□□□□□ -0.27
PTPA-213ENST00000419582 PTNP21246 168 aa13.35□□□□□ -0.27
PTPA-213ENST00000419582 IL12BP29460 328 aa13.35□□□□□ -0.27
PTPA-213ENST00000419582 PDLIM4P50479 330 aa13.35□□□□□ -0.27
PTPA-213ENST00000419582 GPX6P59796 221 aa13.35□□□□□ -0.27
PTPA-213ENST00000419582 DEFA6Q01524 100 aa13.35□□□□□ -0.27
PTPA-213ENST00000419582 POU4F1Q01851 419 aa13.35□□□□□ -0.27
PTPA-213ENST00000419582 PPA1Q15181 289 aa13.35□□□□□ -0.27
PTPA-213ENST00000419582 OR4D1Q15615 310 aa13.35□□□□□ -0.27
PTPA-213ENST00000419582 MSS51Q4VC12 460 aa13.35□□□□□ -0.27
PTPA-213ENST00000419582 TIMM23BQ5SRD1 257 aa13.35□□□□□ -0.27
PTPA-213ENST00000419582 STEAP4Q687X5 459 aa13.35□□□□□ -0.27
PTPA-213ENST00000419582 ESPNLQ6ZVH7 1005 aa13.35□□□□□ -0.27
PTPA-213ENST00000419582 ZNF540Q8NDQ6 660 aa13.35□□□□□ -0.27
PTPA-213ENST00000419582 OR5M1Q8NGP8 315 aa13.35□□□□□ -0.27
PTPA-213ENST00000419582 UHMK1Q8TAS1 419 aaKnown RBP13.35□□□□□ -0.27
PTPA-213ENST00000419582 WDR20Q8TBZ3 569 aa13.35□□□□□ -0.27
PTPA-213ENST00000419582 ZNF675Q8TD23 568 aa13.35□□□□□ -0.27
PTPA-213ENST00000419582 FAM216AQ8WUB2 273 aa13.35□□□□□ -0.27
PTPA-213ENST00000419582 UBTD2Q8WUN7 234 aa13.35□□□□□ -0.27
PTPA-213ENST00000419582 UBXN10Q96LJ8 280 aa13.35□□□□□ -0.27
PTPA-213ENST00000419582 ZNF681Q96N22 645 aa13.35□□□□□ -0.27
PTPA-213ENST00000419582 PRM3Q9NNZ6 103 aa13.35□□□□□ -0.27
PTPA-213ENST00000419582 TMEFF2Q9UIK5 374 aaPredicted RBP13.35□□□□□ -0.27
PTPA-213ENST00000419582 PSME2Q9UL46 239 aa13.35□□□□□ -0.27
PTPA-213ENST00000419582 C7orf72A4D263 438 aa13.34□□□□□ -0.27
PTPA-213ENST00000419582 C17orf51A8MQB3 221 aa13.34□□□□□ -0.27
PTPA-213ENST00000419582 GUCY1B2O75343 617 aa13.34□□□□□ -0.27
PTPA-213ENST00000419582 PGM3O95394 542 aa13.34□□□□□ -0.27
PTPA-213ENST00000419582 ADAP00813 363 aa13.34□□□□□ -0.27
PTPA-213ENST00000419582 RAC1P63000 192 aa13.34□□□□□ -0.27
PTPA-213ENST00000419582 GGTLC2Q14390 218 aa13.34□□□□□ -0.27
PTPA-213ENST00000419582 RNPS1Q15287 305 aaKnown RBP13.34□□□□□ -0.27
PTPA-213ENST00000419582 TSC22D1Q15714 1073 aa13.34□□□□□ -0.27
PTPA-213ENST00000419582 Q6ZT83 130 aa13.34□□□□□ -0.27
PTPA-213ENST00000419582 BHLHA15Q7RTS1 189 aaPredicted RBP13.34□□□□□ -0.27
PTPA-213ENST00000419582 ZNF619Q8N2I2 560 aa13.34□□□□□ -0.27
PTPA-213ENST00000419582 BANPQ8N9N5 519 aa13.34□□□□□ -0.27
PTPA-213ENST00000419582 DUSP19Q8WTR2 217 aa13.34□□□□□ -0.27
PTPA-213ENST00000419582 MUCL1Q96DR8 90 aa13.34□□□□□ -0.27
PTPA-213ENST00000419582 SERPINI1Q99574 410 aa13.34□□□□□ -0.27
PTPA-213ENST00000419582 PIMREGQ9BSJ6 248 aa13.34□□□□□ -0.27
PTPA-213ENST00000419582 RHOJQ9H4E5 214 aa13.34□□□□□ -0.27
PTPA-213ENST00000419582 C12orf49Q9H741 205 aa13.34□□□□□ -0.27
PTPA-213ENST00000419582 MYOZ1Q9NP98 299 aaPredicted RBP13.34□□□□□ -0.27
PTPA-213ENST00000419582 OPTCQ9UBM4 332 aa13.34□□□□□ -0.27
PTPA-213ENST00000419582 METRNQ9UJH8 293 aa13.34□□□□□ -0.27
PTPA-213ENST00000419582 PMF1-BGLAPU3KQ54 211 aa13.34□□□□□ -0.27
PTPA-213ENST00000419582 IGHV4-61A0A0C4DH41 118 aa13.33□□□□□ -0.28
PTPA-213ENST00000419582 LOC390937A0A1W2PQ73 354 aa13.33□□□□□ -0.28
PTPA-213ENST00000419582 GBAP04062 536 aa13.33□□□□□ -0.28
PTPA-213ENST00000419582 CCDC166P0CW27 439 aa13.33□□□□□ -0.28
PTPA-213ENST00000419582 PTAFRP25105 342 aa13.33□□□□□ -0.28
PTPA-213ENST00000419582 SRP14P37108 136 aaKnown RBP13.33□□□□□ -0.28
PTPA-213ENST00000419582 FEN1P39748 380 aaKnown RBP13.33□□□□□ -0.28
PTPA-213ENST00000419582 CORO7P57737 925 aa13.33□□□□□ -0.28
PTPA-213ENST00000419582 CHRNB3Q05901 458 aa13.33□□□□□ -0.28
PTPA-213ENST00000419582 TMEM201Q5SNT2 666 aa13.33□□□□□ -0.28
PTPA-213ENST00000419582 TMEM108Q6UXF1 575 aa13.33□□□□□ -0.28
PTPA-213ENST00000419582 NPSR1Q6W5P4 371 aa13.33□□□□□ -0.28
PTPA-213ENST00000419582 TMEM139Q8IV31 216 aa13.33□□□□□ -0.28
PTPA-213ENST00000419582 GTPBP8Q8N3Z3 284 aaPredicted RBP13.33□□□□□ -0.28
PTPA-213ENST00000419582 LRRC17Q8N6Y2 441 aa13.33□□□□□ -0.28
PTPA-213ENST00000419582 OR2V1Q8NHB1 315 aa13.33□□□□□ -0.28
PTPA-213ENST00000419582 RNF128Q8TEB7 428 aa13.33□□□□□ -0.28
PTPA-213ENST00000419582 HTRA1Q92743 480 aa13.33□□□□□ -0.28
PTPA-213ENST00000419582 GCDHQ92947 438 aaPredicted RBP13.33□□□□□ -0.28
PTPA-213ENST00000419582 MAGOHBQ96A72 148 aaKnown RBP13.33□□□□□ -0.28
PTPA-213ENST00000419582 LRRC39Q96DD0 335 aa13.33□□□□□ -0.28
PTPA-213ENST00000419582 BAG1Q99933 345 aaPredicted RBP13.33□□□□□ -0.28
PTPA-213ENST00000419582 HHATLQ9HCP6 504 aa13.33□□□□□ -0.28
PTPA-213ENST00000419582 FAM120CQ9NX05 1096 aaKnown RBP13.33□□□□□ -0.28
PTPA-213ENST00000419582 KLHL13Q9P2N7 655 aa13.33□□□□□ -0.28
PTPA-213ENST00000419582 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms